Mastomys coucha (southern multimammate mouse): 116087043
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Entry
116087043 CDS
T07224
Name
(RefSeq) protocadherin beta-4-like
KO
K16494
protocadherin beta
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcoc04515
]
116087043
Cell adhesion molecules [BR:
mcoc04515
]
Cadherins
Protocadherins
116087043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
REJ
Motif
Other DBs
NCBI-GeneID:
116087043
NCBI-ProteinID:
XP_031221314
LinkDB
All DBs
Position
Unknown
AA seq
798 aa
AA seq
DB search
MEKLEKAHPNRQVVAFIFMMVLVQVCSEPTTRYSVLEETESGSFVAHLAKDLGLGAGELA
ARSARVVSDDYKQRLLLDPETGDLLLREKVDREELCGSVDPCVLPFQVSLEKPVQYFQGE
LLIHDINDHAPEFSEGEMLLNIPENSQPGTLLPLNLAQDLDVGSNGLQQYTVSPNSHFHV
LTLNNSEGKKYPELVQDRALDREEQAELSLTLTALDGGSPPRSGTALVRILIMDINDNAP
EFMNSPYEVQVLERSPLDSPILTVLARDADAGNFGRVSYGFFQASDEIQKTFSINKVTGE
IRLKKELDFEKIKFYHVKIEAMDGGGLSGKGSVVIEVLDVNDNAPELTISSLTSSVPENT
PDTIISIFRVGDRDSGENGKVVCSIPENMPFILKSTFKNFYTLVTESPLDRESRAEYNIT
ITVSDLGTPRLTTQHTIAVQVSDINDNAPAFTQTSYTMFVRENNSPALHIGTISATDSDS
GSNAHITYSLLPPQDQELTLSSLISINPDNGQLFALRALDYEDLQAFEFHVGATDGGSPA
LSSQALVRVVVLDDNDNEPFVLYPMQNASSPCTELLPRAAEPGYLVTKVVAVDRDSGQNA
WLSFQLLKATEPGLFSVWAHNGEVRTTRLLSERDAPKHRLLLVVKDNGDPPRSVSISLHV
LLVDGFSQPYLSLPEVAPDPTQEVEDVLTVYLVIALASVSSLFLLSVVLFVGVKLCKRAR
APSLGGCSVPEELFPGHMVDVSGTGTLSQNFQYEVCLTGDSGTGEFKFLKPMFPNLLVQD
AGRELNENLHCRDSFVFS
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggagaagctggagaaagctcacccaaacaggcaagtggtcgcttttatttttatgatg
gttttggttcaggtttgcagtgagccaacaactcgatactctgtcttagaggaaacagaa
agtggctcctttgtagcccacctggccaaggatctgggactgggagctggggagctggct
gccaggtctgcacgggtggtgtctgatgattacaagcagagattgctgctggatcctgag
actggagatttgcttctgagggagaaagtagaccgggaggagctgtgtggctctgtggat
ccttgtgtgctgcctttccaggtgtctcttgaaaagccagtacaatattttcaaggagaa
ttattgatccatgacataaatgatcatgctccagagttctcagaaggggaaatgctattg
aatataccagaaaacagccagcctggtactctgttacctctgaatttagcccaggatttg
gatgtgggcagcaatgggcttcaacaatacacagtcagccccaactctcattttcatgtc
ctcactctaaataatagtgaaggcaagaaatacccagagttggtgcaggacagagccctg
gacagagaggagcaggcagagctgagccttacactcacggctctggatggcgggtctcca
ccgaggtcaggaacagccctggttcgaatcctgatcatggatatcaatgacaatgctcct
gagtttatgaacagcccctatgaggtgcaagtcctagagagaagtcccctggactcccca
atcctgactgtcttagcacgggatgcagatgctggcaactttgggagagtttcctatggc
ttcttccaagcatcagatgaaattcagaagactttctcaataaacaaagtcacaggagaa
atacgactgaaaaaggaattggattttgaaaaaattaaattttaccatgtgaaaattgag
gccatggatgggggagggctttctggaaaaggatctgtggtgatagaggtgttggatgtg
aacgacaatgccccagagctgaccatatcttcactgaccagctcagtcccagaaaatact
cctgacaccataatcagcatcttcagagttggggacagggattccggagagaatggaaag
gtggtttgttctattccagaaaacatgccattcattctaaaatccactttcaagaatttc
tacactctagtgacagagagccctctggacagagagagcagagctgaatacaatattact
atcactgtctccgacctgggcacacccaggctcacaacccagcacaccatagcagtgcag
gtgtcagacatcaacgacaacgcccccgccttcacccaaacctcctacaccatgtttgtc
cgcgagaacaacagtcccgccctgcacataggcaccatcagtgccacagactcagactca
ggctccaatgcccacatcacctactcgctgctgccaccccaggatcaagagttgactctc
agctccttaatctccattaatcccgacaatgggcagctgttcgcactcagggcgctggac
tatgaggacctgcaggccttcgagttccatgtaggcgccacagatggaggctcgcccgcg
ctcagcagccaggctctggtgcgcgtggtggtgctggacgacaatgacaatgagcccttc
gtgctctacccgatgcagaacgcctcttcaccctgcacggagctgctccccagggcggca
gagcccggatacctggtcaccaaggtagtggcagtggatcgcgactctggccagaatgcc
tggctgtccttccagctgctcaaggccacggaacccgggttgtttagcgtgtgggcacac
aatggcgaggtgcgcaccaccaggctgctaagtgagcgtgatgcacccaagcacaggctg
ctgctggtggtcaaggacaatggcgatcctccccgctctgtcagtatcagtcttcatgtg
ctgctggtggatggcttttcccagccctacctctctctgcctgaggtggcgcctgacccc
acacaggaagttgaggatgtgctcactgtttacctggtcattgccttggcatctgtgtct
tcactcttcctcttgtctgtggtgctcttcgtgggggttaagttgtgcaagagggccagg
gcaccctctttgggtggctgctctgtgcctgaggaactctttcctggccacatggtggat
gtcagtggcacagggaccttgtcccaaaacttccaatatgaggtgtgtctgacgggggac
tctgggactggtgagttcaaattcctcaaacccatgttccccaacctgttggttcaggat
gctgggagagaacttaatgaaaatcttcactgcagggatagctttgtgttcagttaa
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