Mastomys coucha (southern multimammate mouse): 116087045
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Entry
116087045 CDS
T07224
Name
(RefSeq) protocadherin beta-6-like
KO
K16494
protocadherin beta
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcoc04515
]
116087045
Cell adhesion molecules [BR:
mcoc04515
]
Cadherins
Protocadherins
116087045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
REJ
Motif
Other DBs
NCBI-GeneID:
116087045
NCBI-ProteinID:
XP_031221316
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
METALGKTPEKRQVVFLTMLLLLWKSDAETIRYSMPEETESGYLVANLAKDLGLRVGVLA
TRGARIHYRENKDLLQLDTKTGNLFLRKKPDREVLCGVTEPCVLHFQVILENPVQFFQIE
LQLTDINDHSPEFPDRKMLLKIPESAQPGAMFPLKAAQDSDIGSNAVQNYTVSPNLHFHV
VTHSLSDGKKYPELVLDRALDREEQPDLTLTLTALDGGAPPQSGTTTVHIEVVDINDNAP
QFEQSLYEVQIPENSPLNALVVMVSARDLDAGIYGTVTYSLFQGGELSQPFVIDEITGEI
RLKGALDFEVTPYYNIKIVATDTGGFSGKCSVAVQVVDVNDNAPKLTISSLTSSIPENAP
EAVVAVFSVSDPDSGDNGRMVCSIQNELPFLLKPTFENYYTLVTEGPLDRESRAEYNITV
TVTDLGTPRLTTQHTITVQVSDINDNGPTFTQASYTMFVKENNSPALHIGTISATDLDSG
SNAHITYSLLLPPQVPHLSLNDLVSINADNGQLFALRSLDYEALQAFEFHVGATDGGSPA
LSSQALVHVVVLDDNDNEPFVLYPLQNASAPCTELLPRAAEPGYLVTKVVAVDRDSGQNA
WLSFHLLKATEPGLFSVWAHNGEVRTTRLLSERDVPKHRLLLVVKDNGDPPRSTSVTMQV
LLVDGFSQPYLPLPEVMRDPVQEDHDALTLYLVIALASVSSFFLLSVLLFVGIRLCKRAR
AASLGVCSVPERHFPGHLVDVSRTGTLSQSYQYEVCLTGDSGTASLHLSKEPGNFWKFQQ
SI
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgcactaggaaaaacgccagagaaaaggcaagtcgttttccttactatgtta
ttgctattgtggaagtctgacgctgagacaattagatattccatgccagaagagacagag
agtggctacttagtggctaatttggcaaaagatcttgggctccgggttggagtactggct
actaggggggcacgaatccattacagagaaaacaaagacctcttgcagctggatacaaag
acagggaatttattcctgaggaaaaaacctgaccgtgaggtgttgtgcggggtgacagaa
ccctgtgtgctgcacttccaggtcatactggaaaaccctgtgcagttcttccaaattgaa
ctgcagctcacagatataaatgaccactctccagagttccctgacaggaaaatgctccta
aaaatccctgagagcgcccaaccaggggccatgtttcctctgaaggcagcgcaggactct
gacatagggagcaacgctgttcagaactacacagtcagtcccaacctccatttccatgtc
gttactcacagtctctcggatggcaaaaaatacccagagctggtgctggacagagccctg
gacagggaggagcagcctgatctcactttaaccctcactgctctggatggtggagctccg
ccccagtcaggaaccaccacagttcacattgaagttgtggacatcaatgataacgccccc
caatttgaacagtcgctctatgaggtgcagattcctgaaaacagcccactcaatgcctta
gttgtcatggtctctgccagggatttagatgctgggatatatggaactgtaacctactct
ctgtttcaaggtggtgaactatctcaaccatttgtaatagacgaaatcacaggagaaatt
cgtcttaaaggggcattggattttgaggtaactccatattataacataaaaattgtagct
acagacacaggaggcttttcaggaaaatgcagtgtagctgtacaggtggtggatgtgaac
gacaatgccccgaaactcaccatatcttcgctcactagttccatcccagaaaatgctcct
gaggctgtagttgctgttttcagtgtttctgacccagattctggggataatggaaggatg
gtgtgttccattcagaatgaacttccatttcttttgaagcccacattcgagaattattat
actttagtaacagaggggccacttgatagagagagcagagctgaatacaacatcacggtc
actgtcactgacctgggcacccccagactcacaacccagcacaccataacagtgcaggtg
tccgacatcaatgacaacggccccaccttcacccaagcttcctacaccatgttcgtcaag
gagaacaacagtcccgccctgcacataggcaccatcagtgccacagacttagactcaggc
tccaatgcccacatcacctactcgctgctgctgcctccccaggttccacacctatccctc
aatgatctggtctccatcaatgcagacaatgggcagctgtttgctctcaggtcactggac
tatgaggccctacaggccttcgagttccatgtaggcgccacagatggaggctcacccgcg
ctcagcagtcaggctctggtacacgtggtggtgctggacgacaatgacaatgagcccttc
gtgctctacccactgcagaatgcctctgcgccctgcactgaactgttacccagagctgcg
gagccaggctacttagtcaccaaggtggtggcagtggaccgagactctggtcagaatgcc
tggctatcgttccacctgctcaaggccacggagcccgggctgttcagcgtgtgggcacac
aatggcgaggtgcgtactaccaggctgctgagcgagcgtgatgtgcccaagcacaggctg
ctgctggtggtcaaggacaatggcgatcctccgcgctctaccagtgtcacaatgcaggtg
ctgctggtggatggcttttcgcaaccctacctgcctctgcctgaagtcatgcgggacccc
gttcaagaagatcatgatgctctcacgctgtatctggtcattgccttagcatctgtgtct
tcattcttcctcttgtctgtcctgctcttcgtggggataaggctgtgcaagagggccagg
gcggcttctctgggtgtctgctctgtgcctgagaggcattttcctggtcacctggtggat
gttagcagaactggaactctgtcccagagctaccagtatgaggtgtgtctgacaggagac
tctgggactgcttctcttcacctttcaaaagagccagggaatttctggaaatttcagcag
tctatttga
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