Mastomys coucha (southern multimammate mouse): 116087046
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Entry
116087046 CDS
T07224
Name
(RefSeq) protocadherin beta-4-like
KO
K16494
protocadherin beta
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcoc04515
]
116087046
Cell adhesion molecules [BR:
mcoc04515
]
Cadherins
Protocadherins
116087046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
REJ
Motif
Other DBs
NCBI-GeneID:
116087046
NCBI-ProteinID:
XP_031221317
LinkDB
All DBs
Position
Unknown
AA seq
798 aa
AA seq
DB search
MHFTVMEKLGRIHPNRQVMVFIFIMILVQVCSEPTTRYSVLEETESGSFVAHLAKDLGLG
SGELAARSARVMSDDYKQRLLLDPETGDLLLREKLDREELCGSVDPCVLPFQVSLEKPVQ
YFQGELLIQDINDHAPKFPEGEMLLNIPENSHPGTQFSLKLAQDLDVGSNGLQQYTVSPN
SHFHVLTRNNSEGKKYPELVQDRALDREEQAELSLTLTALDGGSPPRSGTALVRILIMDI
NDNAPEFVNSPYEVQVLESSPPGYRFLTVLARDADAENFGRVSYGLSQASDDIQQTFSIN
KTTGDMRLKKKLDFEKIKSYHVEIEAIDGGGLSGKGSVMIEVLDVNDNAPELTISSLTSS
VPENAPETIISFFRVGDRDSGENGKVVCSIPENMPFILKSTFKNFYTLVTESPLDRESRA
EYNITITVSDLGTPKLTTQHTITVQVSDINDNAPAFSQTSYTMFVQENNSPVLHIGTISA
TDSDSGSNAHIIYSLLPPQDQQLALTSLVSINADNGQLFALRALDYEALQAFEFHVGATD
GGSPALSSQALVRVVVMDDNDNSPFVLYPMQNTSTSCTELLPRAAEPGYLVTKVVAVDRD
SGQNAWLSFQLLKATEPGLFSVWAHNGEVRTTRLLSERDVPKHRLLLVVKDNGEPQRSAS
VTLQVLLVDGFSQPYLPLPEVERNSKQEDEDVLTLYLVIALASVSSLFLVSVLLFVGVRL
CRRSREVSLGGCSMAEGHFPDHLVDVSGAGTLSQSYQYEVCLRGNSGTGEFKFLKPMIPN
AGIEIMESPQCRDSFVFN
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgcacttcaccgtcatggagaagctggggagaatccacccaaacaggcaagtaatggtg
tttatctttataatgattttggttcaggtttgcagtgagccaacaactcgatactctgtc
ttagaggaaacagaaagtggctcctttgtagcccacctggccaaggatctggggctggga
tctggggagctggctgccaggtctgcacgggtgatgtctgatgattacaagcagagattg
ctgctggatcctgagactggggatttgcttctgagggagaaactagaccgggaggagctg
tgtggctctgtggatccctgtgtgctgcctttccaggtgtctcttgaaaagccagtacaa
tattttcaaggagaattattgatccaggacataaatgatcatgctccaaaattcccagaa
ggggaaatgctattgaatataccagaaaacagccacccaggcacacagttttcattgaaa
ttagcccaggatttggatgtgggcagcaatgggcttcaacaatacacagtcagccccaac
tctcattttcatgttctcactcgaaataatagtgaaggcaagaaatacccagagctggtg
caggacagagccctggacagagaggagcaggcagagctgagccttacactcacagctctg
gatggtgggtctccaccaaggtcaggaacagccctggttcgaatcctgatcatggacatc
aatgacaatgctcctgagtttgtgaacagtccctatgaggtgcaggtcctggagagcagt
cccccaggataccgattcttgactgtcctagcacgggatgcagatgctgaaaactttggg
agagtttcctatggtttgtctcaagcatcagatgatatccaacaaacgttctcaataaac
aaaactactggagacatgcgattgaaaaagaaattggatttcgagaaaatcaaatcttac
catgtggaaatcgaggccatagacggcggagggctttctggaaaaggctctgtaatgata
gaggtgttggatgtgaacgacaatgccccagagctgaccatatcttcactgaccagctca
gtcccagaaaatgctcctgaaaccataatcagctttttcagagttggagacagggattcc
ggagagaacggaaaggtggtttgttctattccagaaaacatgccattcattctaaaatcc
actttcaagaatttctacactctagtgacagagagccctctggacagagagagcagagct
gaatacaacatcaccatcactgtctccgacctgggcacacccaagctcacaacccagcat
accataacagtgcaggtgtccgacatcaatgacaacgcccctgccttcagccaaacctcc
tacaccatgtttgtccaggagaacaacagtcccgtcctgcacataggcaccatcagtgcc
acagactcagactcaggctccaatgcccacatcatctactctttgctgccaccccaggat
caacagctggccctcacctccctagtgtccatcaatgctgacaatgggcagctgttcgca
ctcagggcattggactatgaggccctgcaggcctttgagttccacgtaggtgccacagac
ggaggctcgcccgcgctcagcagccaggctctggtgcgcgtggtggtgatggatgacaat
gacaattctcccttcgtgctctacccgatgcagaacacctctacatcctgcactgagctg
ttgcccagagctgcggaaccaggttacttggtcaccaaggtggttgctgtggaccgtgac
tctggccagaatgcctggctatccttccaattgctcaaggccactgaacctgggctgttc
agtgtgtgggcacacaatggcgaggtgcgcaccaccaggctgctgagtgagcgtgatgtg
cccaagcacaggctgctgctggtggtcaaggataatggtgagcctcagcgctctgccagt
gttactctgcaggtgttgctggtggatggcttctcacaaccctacctacctcttccagag
gtagagcggaattccaagcaagaagatgaggatgtgcttacattgtacctggtcattgcc
ttggcttctgtatcttctctcttcctggtgtctgtgctgctgtttgtgggggtgaggctg
tgcaggaggtccagagaggtctctctgggtggctgctctatggctgagggacactttcct
gaccacctggtggatgtcagtggagcagggaccctgtcccaaagctaccagtatgaggtg
tgtctgaggggcaactctgggactggtgagttcaagttcctgaaacccatgatccccaat
gctggaatagaaattatggaaagtccccaatgcagggatagctttgtattcaactaa
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