Mastomys coucha (southern multimammate mouse): 116087047
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Entry
116087047 CDS
T07224
Name
(RefSeq) protocadherin-3-like
KO
K16494
protocadherin beta
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcoc04515
]
116087047
Cell adhesion molecules [BR:
mcoc04515
]
Cadherins
Protocadherins
116087047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
REJ
Motif
Other DBs
NCBI-GeneID:
116087047
NCBI-ProteinID:
XP_031221318
LinkDB
All DBs
Position
Unknown
AA seq
797 aa
AA seq
DB search
METAQAKMPQQRQVVFLTILLLLCKAGSEAIRYSMPEETEIGYLVANLAKDLGFKVGKLA
TRGAQIHYKGNKELLELDAETGNLFLKEKLDREVLCGATEPCILHFQIILENPVQFFQIE
LQLTDINDHSPEFPDRKMLLKIPENAQPGTLFALKAAQDPDTGSNTVQNYTVSPNLHFHV
VTHSRTDGRKYPELVLDRALDREEQPELTLTLTALDGGAPPQSGTTTIHIEVVDINDNAP
QFIQSLYEVQILENSPLGALVVTVSARDLDTGTYGNVAYSLFQGDGVSQPFVIDAVTGEI
RLSKELDFEEISHYNIEITATDGGDLSGKCTVTVQVLDVNDNPPELTIRKLTVPVPENSA
ESVVAVFSVSDSDSGENGRIVCSIQNNIPFLLKPTFENYYTLVTEGPLDRESRAEYNITI
MVSDLGTPRLTTQHTITVQVSDINDNAPVFAQVSYTLFVQENNSPALHIGTISATDSDSG
SNAHITYSLLPPQDQQLDLASLISINPDNGQLFVLRALDYEALQAYEFRVGATDRGSPAL
SSETLVRVVVLDDNDNAPFVLYPLQNASAPCTELLPREAESGYLVTKVVAVDRDSGQNAW
LSFQLLKATEPGLFSVWAHNGEVRTTRLLSERDAPKHRLLLLVKDNGDPPRSTSVTLQVL
LVNSFSQPYLPLPDVAHDPIHGDEEVLTLYLVIALASVSSLFLLSILMFVGMRLCRRARA
ASLGVCSVPEGHLPGHLMDVSGMESLSQSYQYEVCLSGDSRTGEFKFLKPMIPNVMVQDA
GRDMKASAPCRDSFVFS
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggagacagcccaagcaaaaatgccccagcaaaggcaagtcgtttttcttactatattg
ttgctattgtgtaaggctggctctgaggcaattagatattccatgccagaagaaacggaa
attggttacttggtggctaacctggcaaaagatctggggttcaaggtagggaaactggcc
actagaggagctcaaatccattacaaaggaaacaaagagctcttggagctggatgcagag
actgggaatttgttcttaaaggaaaaactagaccgggaggtactttgtggggcaacagaa
ccctgtatactgcacttccagatcatactggaaaaccctgtgcagttcttccaaattgaa
ctgcaactcactgatataaatgaccactctccagagttccctgacaggaaaatgcttcta
aaaatccctgagaatgcccagccagggaccctgtttgctctgaaggcagctcaggaccct
gacacagggagcaacactgttcagaactacactgtcagtcccaacctccatttccatgtc
gttactcacagtcgcacagatggcaggaaatacccagagctggtgctggacagagctctg
gacagggaggagcagcctgagctcactttaaccctcactgctctggatggtggagctccg
cctcagtcaggaaccaccacaattcacattgaagttgtggacatcaatgataacgccccc
cagtttatacaatcactctatgaggtgcagattctcgaaaatagcccgcttggtgcctta
gttgtcacagtctctgcaagagatttagatactgggacatatggcaatgtagcctactct
ctgtttcaaggcgatggagtatctcaaccatttgtaatagacgcagttaccggagaaatc
cgtctgagcaaagagctggattttgaggaaattagccattataacatagagatcacagcc
actgatggaggagacctttcaggaaaatgcactgtgactgtacaggtgttggatgtgaat
gacaaccccccagagctgacgatcaggaagctcacagtccctgtcccagaaaattcagcc
gagagtgtagttgctgtttttagtgtttctgattcagattcgggggaaaatggaaggata
gtgtgttctatccagaacaatatcccatttctcctgaaacccacatttgagaattattac
actttagtgactgaggggccacttgatagagaaagcagagctgagtacaacatcaccatc
atggtctcagatctgggcacacccaggctcacaacccagcacaccattacagtgcaggtg
tcagacatcaacgacaacgcccccgtcttcgcccaagtttcctataccctatttgtgcaa
gagaacaacagcccagccttgcacataggcaccatcagtgccacagactcagactcaggc
tccaatgcccacatcacctactcgctgctgccgccccaagaccagcagctggacctcgcc
tcgctaatctccattaaccctgacaatgggcagctgttcgtgctcagggctctggactac
gaagccctgcaggcctacgagttccgcgtgggcgccacagaccgaggctcaccggcgctc
agcagtgagactctggtgcgggtggtggtgctggacgacaatgacaatgcgcccttcgtg
ctctacccattgcagaatgcttctgcaccctgcacggagctgctacccagggaggcggag
tctggttacctggtcaccaaggtggtggctgtggatcgcgactctggccagaatgcctgg
ctgtcattccagctactcaaggctacagagcccggactgtttagtgtgtgggcgcacaat
ggggaggtgcgcaccaccaggctgctgagcgagcgcgatgcacccaagcacaggctgctg
ctgctggtcaaggacaatggcgaccctccacgctctaccagtgttacactgcaagtgctg
ttggtgaatagtttctctcagccctacctgcctctgcctgacgtggcgcacgaccccatt
catggggatgaagaggtgctcacgctgtacctggtcattgccttggcttctgtttcttca
ctctttctcttgtctatccttatgtttgtgggaatgaggctgtgcaggagggccagagcg
gcttctctgggtgtctgctctgtgcctgaggggcacttacctggccacctgatggatgtc
agtggtatggagagtctgtcccagagctaccagtatgaggtgtgtctatcaggagactct
aggactggtgagttcaaattcctcaaacctatgattcccaatgtaatggttcaggatgct
gggagagacatgaaggcaagtgccccctgcagggatagctttgtattcagttaa
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