Mastomys coucha (southern multimammate mouse): 116087054
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Entry
116087054 CDS
T07224
Name
(RefSeq) protocadherin beta-16-like isoform X1
KO
K16494
protocadherin beta
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcoc04515
]
116087054
Cell adhesion molecules [BR:
mcoc04515
]
Cadherins
Protocadherins
116087054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
REJ
Motif
Other DBs
NCBI-GeneID:
116087054
NCBI-ProteinID:
XP_031221325
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
METARMCNLRQRQVLAFFVLLGVSGAGAELGPYSIEEETERGSFVANLGKDLGVELAEIS
SRRARIISQENKEHLQLNIQSGDLLINEKLDREELCGPIEPCVLHFQVLMENPLEVFQAE
LRVMDINDCSPVFSEREMILRIPENSALGNTFPLNNALDSDVEINNIQTYRLSSNSHFLV
VTSNRSDGRKYPELVLQKELDREEEPELRLTLTALDGGSPPRSGTAHVLIEVVDSNDNAP
EFQQPTYRVQIPENSPAGSLVLTVSANDLDSGDNGKVLYALSRPSEDISKTLEVNPVTGE
IQLRKEVDFETIPSYEVDIKATDGGGLSGKCTLLLQVVDVNDNAPEVMISALTSPVPENS
PDEVVAVFSVRDPDSANNGKNGKMVCYIQENLPFLLKPSLDNFYILMTEGALDRESRAEY
NITITVSDLGTPRLTTQHTITVQVSDINDNAPAFTQTSYTMFVHENNSPALHIGTISATD
LDSGSNAHITYSLLPPQDPQLALATLISINAENGQLFALRALDYEALQAFEFHVGATDQG
SPALSSQALVRVVVLDDNDNEPFVLYPLQNASAPYTELLPRAAEPGYLITKVVAVDRDSG
QNAWLSFQLLKATEPGLFSVWAHNGEVRTTRLLSERDVPKHRLLLLVKDNGDPPRSASVT
LHVLLVDGFSQPYLPLPDVAHNPAQGEEDVLTLYLVIALASVSSLFLVSVLLFVGVRLCR
RARETSLGGCSVPEGHFPGHLVDVSGTGTLSQSYQYEVCLMGGSSGTSDFKFLKPIYPEV
HAYGSQSNSDENPTF
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggagactgcaaggatgtgcaatctgagacaaaggcaagtcctggctttctttgttttg
ctgggtgtgtctggggcaggggcagaactgggtccctattccatagaggaagaaacagag
aggggctcctttgtggcaaatcttgggaaagatctgggggtggagctggcagagatatcc
agtcgcagggctcggatcatttcccaggaaaacaaagagcatttgcagctcaacattcag
tctggagatttgcttataaatgagaaactggatcgagaagagctatgtgggcccattgag
ccgtgtgttctacacttccaagtgttaatggaaaaccctttagaggtatttcaggctgaa
ctgagggtgatggacataaatgactgttctccagtgttcagtgaaagagaaatgatactg
agaataccggaaaacagtgctctgggaaatacattcccattaaataatgctctggactca
gacgtagaaatcaacaatatccagacctataggctcagctcaaactctcatttcctggtt
gtaaccagcaaccgcagtgatggcaggaagtacccagagctggtgctgcagaaagaactg
gatcgagaggaggaacctgagctgaggttaaccctgacagctctggatggtggctctcct
ccccggtctgggaccgcacatgttctcattgaagttgtagacagcaatgataatgcacct
gagtttcagcagccaacataccgagtgcaaattcccgaaaacagccccgctggctctcta
gtactcacagtctcagccaacgacttggacagtggagataatggaaaagtactgtacgca
ctctctcggccttcagaagatattagcaaaacgttagaagtaaaccctgtaaccggggag
attcaactacgaaaagaggtggattttgaaactattccctcttacgaagtggatatcaag
gccacagacgggggaggtctctcaggaaaatgcacgctgttactgcaggtggtggatgtg
aatgacaatgccccagaagtgatgatatcagcgcttaccagcccagtcccagaaaactcc
ccggatgaggtagttgctgttttcagtgttagagatcctgactcagcgaacaacggaaaa
aatggaaaaatggtttgctacattcaagaaaatctacctttccttctaaaaccttccttg
gacaatttttacatcctaatgacagaaggagcactagacagagagagcagagccgagtac
aacatcaccatcactgtctctgacctgggcacacccaggctcacaacccagcacaccatt
acagtgcaggtgtccgacatcaatgacaacgcccccgccttcacccaaacctcctacacc
atgtttgtccacgagaacaacagcccggctctgcacataggcaccatcagtgccacagac
ttagactcaggctccaatgcccacatcacctactcgctgctgccgccccaggacccacag
ctggccctcgccacgctcatctccatcaatgctgagaacgggcagctgttcgcgctcagg
gctctggactatgaggccttgcaggccttcgagttccacgtgggtgcgacagaccaaggc
tcgcccgcgctcagcagccaggctctggtgcgcgtggtagtgctggacgacaatgacaat
gagcccttcgttctctacccactgcagaacgcttctgcaccctacactgagctgctgccc
agggcggcggagcccggatacctgatcaccaaggtggtggcagtggatcgcgactcaggc
cagaatgcctggctatcattccagctgctcaaggctactgagcccgggttgttcagcgtg
tgggctcacaatggagaggtgcgtaccaccaggctgctgagcgaacgcgatgtgcccaag
cacaggcttctgcttctggtcaaagacaatggcgaccctccccgctctgccagtgtcaca
ctgcacgtgctgttggtggatggcttctctcagccctacctgcctctgcccgacgtggca
cacaaccccgctcaaggggaagaggatgtgctcacgctgtacttggtcatagccttggct
tctgtgtcttctctcttcctggtgtctgtgctgctgtttgtgggggtgaggctgtgcagg
agggccagggagacctctctgggcggctgctctgtgcctgagggacactttcctggccac
cttgtggacgtcagcggtacaggaacgctctcccagagctaccaatatgaggtgtgtcta
atgggcggctcctctggtaccagtgatttcaagttcttgaaaccgatttacccggaagtt
catgcttatggttcccagagcaatagcgatgaaaatcccacattttga
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