Mastomys coucha (southern multimammate mouse): 116087142
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Entry
116087142 CDS
T07224
Symbol
Sema6a
Name
(RefSeq) semaphorin-6A isoform X1
KO
K06842
semaphorin 6
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
116087142 (Sema6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
DUF3481
Motif
Other DBs
NCBI-GeneID:
116087142
NCBI-ProteinID:
XP_031221509
LinkDB
All DBs
Position
Unknown
AA seq
1048 aa
AA seq
DB search
MRPAALLLCLTLLHSAGAGFPEDSEPISISHGNYTKQYPVFVGHKPGRNTTQRHRLDIQM
IMIMNRTLYVAARDHIYTVDIDTSYTEEIYCSKKLTWKSRQADVDTCRMKGKHKDECHNF
IKVLLQKNDDTLFVCGTNAFNPSCRNYRVDTLETFGDEFSGMARCPYDAKHANIALFADG
KLYSATVTDFLAIDAVIYRSLGDGPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIA
VEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQAVT
DVIRINGRDVVLATFSTPYNSIPGSAVCAYDMLDIANVFTGRFKEQKSPDSTWTPVPDER
VPKPRPGCCAGSSSLEKYATSNEFPDDTLNFIKTHPLMDEAVPSIINRPWFLRTMVRYRL
TKIAVDNAAGPYQNHTVVFLGSEKGIILKFLAKIGSGGFLNGSLFLEEMNVYNPEKCSYD
GVEDKRIMGMQLDRASGSLYVAFSTCVIKVPLGRCERHGKCKKTCIASRDPYCGWVRESG
SCAHLSPLSRLAFEQDIERGNTDGLGDCHNSFVALNDISTPLPDYEMSFNRVYGHTSSLY
PSTTTSDSASRDGYESRGGILDWNDLLDAPGSTDPLGAVSSHNHQDKKGVIRESYLKSND
QLVPVTLLAIAVILAFVMGAVFSGIIVYCVCDHRRKDVAVVQRKEKELTHSRRGSMSSVT
KLSGLFGDTQSKDPKPEAILTPLMHNGKLATPSNTAKMLIKADQHHLDLTALPTPESTPT
LQQKRKPNRGSREWERNQNLINACTKDMPPMGSPVIPTDLPLRASPSHIPSVVVLPITQQ
GYQHEYVDQPKMSEVVAQMALEDQAATLEYKTIKEHLSSKSPNHGVNLVENLDSLPPKVP
QREASLGPPGASLSQTGLSKRLEMQHSSSYGLEYKRSYPTNSLTRSHQATTLKRNNTNSS
NSSHLSRNQSFGRGDNPPPAPQRVDSIQVHSSQPSGQAVTVSRQPSLNAYNSLTRSGLKR
TPSLKPDVPPKPSFAPLSTSMKPNDACT
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgaggccagcagccttactgctatgtctcacactgctacactccgctggggctggtttc
ccagaagattctgagccaatcagtatttcgcatggcaactatacaaaacagtatccggtg
tttgtgggccacaagccaggacggaacaccacacagaggcataggctggacatccagatg
atcatgatcatgaacagaaccctctacgttgctgctcgagaccatatttatactgttgat
atagacacatcctacacagaagaaatttactgtagcaaaaagctgacatggaaatctaga
caggctgacgtagacacatgcaggatgaaggggaagcataaggatgaatgtcacaacttc
attaaagttcttctccagaagaacgatgatacgctgtttgtctgtggaaccaatgccttc
aacccttcctgcagaaactacagggtcgatactttggaaactttcggggatgaatttagc
ggaatggccagatgcccttatgatgccaaacatgctaacatcgctctgtttgcagacgga
aaactctactcggccaccgtgactgactttctggccattgacgcggtcatttacaggagc
cttggagacggccccaccctcaggactgtcaaacatgattcaaagtggttgaaagagccg
tactttgtccaagctgtggattacggggactatatctacttcttcttcagagaaattgca
gtagaatacaacactatggggaaggttgtcttccctcgggtggctcaggtgtgtaagaat
gacatgggagggtcgcagagagtcctggagaagcagtggacatctttcctgaaggctcgc
ctgaactgctccgtgcctggagactctcatttttatttcaatatactccaggcagttaca
gatgtgattcgcattaatggccgtgatgttgtcttggcaaccttttccacaccttataac
agcatccctggttctgcagtttgtgcctatgacatgcttgacattgccaatgtttttacg
ggaagattcaaggaacagaagtcacctgattctacctggacaccagttccagacgagcga
gtccctaagcccaggccaggctgttgtgcgggatcatcctctttagaaaaatatgcaacc
tccaatgagtttcctgatgataccctgaacttcattaagacacatccactcatggacgag
gcagtgccttccatcatcaacaggccttggttcctgagaacgatggtcagataccgcctg
accaaaattgctgtagacaacgctgctgggccatatcagaatcacactgtggttttcctg
ggatcagaaaagggaatcatcttgaagttcttggccaagataggaagtggtggtttccta
aatggcagccttttcctggaggaaatgaatgtttacaacccagaaaagtgcagctatgat
ggtgtagaagacaagaggatcatgggcatgcagctggacagagcgagtggctcactctat
gttgcattctctacttgtgtgataaaggtgcctcttggccgctgtgagcgacatggaaag
tgtaaaaaaacctgcatcgcctccagagacccatattgcggatgggtaagggaaagtggt
tcctgtgcccatctgtcacctcttagcagactggcttttgagcaggacattgagcgtggt
aatacggacggcctaggagactgtcacaattccttcgtggcactgaatgacatttcaact
cctctaccagattatgaaatgtctttcaacagagtatatgggcacaccagttccctctat
cccagcaccactacgtcagattcggcgtcccgagacgggtatgagtctaggggaggcata
ctggactggaacgacctgctcgatgcacccggcagcacagaccctttgggggcagtgtcc
tctcataaccaccaggacaagaagggagtgattcgggaaagttacctcaaaagcaacgac
cagctcgttcctgtcaccctcctggccattgctgtcattctggcttttgtcatgggggcc
gtcttctccggcatcattgtgtattgtgtttgcgatcaccggcgcaaagacgtggcagta
gtgcagcgcaaggagaaagagctcacccactcgcgtcggggatctatgagcagcgtcacc
aagctcagtggcctctttggggacacccagtccaaggacccaaagcccgaggcaatcctc
acaccactcatgcataacggcaaactggccacgcctagcaacaccgccaagatgctcatc
aaggctgaccagcatcacctagacctcactgccctgcccaccccggagtccaccccgacg
ctgcagcagaagcggaaacccaaccgcggaagtcgtgagtgggagaggaaccagaacctc
atcaatgcctgcaccaaggacatgcctcccatgggctcccctgtgattcccacggaccta
cccctccgggcctccccaagccacatccccagcgtagtggtcctacccatcacgcagcag
ggctaccagcacgagtacgtagatcagcccaaaatgagcgaggtagtggctcagatggca
ctagaggaccaagctgccaccctggagtataagaccatcaaagagcatctgagcagcaag
agtcccaaccatggggtgaaccttgtggagaacctggacagcctgccccccaaagttcca
cagcgtgaggcctccctgggtcccccgggagcctcgttgtcacagaccggcctgagcaag
aggctggaaatgcaacactcctcctcctacgggcttgaatataagaggagctaccccacg
aactcgctcacgagaagccaccaggccaccactctcaaaagaaacaatactaactcctcc
aattcctcccacctctccaggaaccagagctttggccggggagacaacccacctcccgcc
ccgcagcgggtggactctatccaggtgcacagctcccagccctctggccaggccgtgact
gtttcgaggcaacccagtctcaatgcctacaactcactgacgaggtcggggctgaagcgc
acgccctcgctaaagccagatgtaccccccaaaccttcctttgctcccctttccacatcc
atgaagcccaatgatgcgtgtacataa
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