Mastomys coucha (southern multimammate mouse): 116087261
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Entry
116087261 CDS
T07224
Symbol
Wdr7
Name
(RefSeq) WD repeat-containing protein 7 isoform X1
KO
K24738
rabconnectin-3b
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
116087261 (Wdr7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116087261 (Wdr7)
Membrane trafficking [BR:
mcoc04131
]
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
116087261 (Wdr7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_EML
EIF3I
WDR55
CFAP251_N
ASA1
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_NOL10_N
Beta-prop_VPS8
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_ACSF4
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
PAC11
WDR72_alpha-sol
Beta-prop_WDR19_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
PEP5_VPS11_N
Tricorn_2nd
Beta-prop_Vps41
Beta-prop_LRRK2
AMN1_helical
PD40
Motif
Other DBs
NCBI-GeneID:
116087261
NCBI-ProteinID:
XP_031221721
LinkDB
All DBs
Position
Unknown
AA seq
1489 aa
AA seq
DB search
MAGNSLVLPIVLWGRKAPTHCISSILLTDDGGTIVTGCHDGQICLWDLSVDLEVNPRALL
FGHTASITCLSKACASGDKQYTVSASANGEMCLWDVNDGRCIEFTKLACTHTGIQFYQFS
VGNQQEGRLLCHGHYPEVLVVDATSLEVLYSLVSKISPDWISSMSIIRSHRTQEDTVVAL
SVTGILKVWIVTSEISGMQDTEPIFEEESKPIYCQNCQSISFCAFTQRSLLVVCSKYWRV
FDAGDYSLLCSGPSENGQTWTGGDFVSADKVIIWTENGQSYIYKLPASCLPASDSFRSDV
GKAVENLIPPVQHSLLDQKDKELVICPPVTRFFYGCKEYLHKLLIQGDSSGRLNIWNIAD
IADKQEADEGLKMTTCISLQEAFDKLKPCPAGIIDQLSVIPNSNEPLKVTASVYIPAHGR
LVCGREDGSIIIVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKVTCLLYPHQVSARY
DQRYLISGGVDFSVIIWDIFSGEMKHIFCVHGGEITQLLVPPENCSARVQHCICSVASDH
SVGLLSLREKKCIMLASRHLFPIQVIKWRPADDYLVVGCTDGSVYVWQMDTGALDRCAMG
ITAVEILNACDEAVPAAVDSLSHPAVNLKQAMTRRSLAALKNMAHHKLQTLATNLLASEA
SDKGNLPKYSHNSLMVQAIKTNLTDPDIHVLFFDVEALIIQLLTEEASRPNTALISPENL
QKASGSSDKGGSFLTGKRAAVLFQQVKETIKENIKEHLLDEDEDEEEAMRQRREESDPEY
RASKSKPLTLLEYNLTMDTAKLFMSCLHAWGLNEVLDEVCLDRLGMLKPHCTVSFGLLSR
GGHMSLMLPGYNQAAGKLLHAKAEVGRKLPATEGVGKGTYTVSRAVTTQHLLSIISLANT
LMSMTNATFIGDHMKKGPTRPPRPGTPDLSKARDSPPASSNIVQGQIKQAAAPVVSARSD
ADHSGSASASPALHTCFLVNEGWSQLAAMHCVMLPDLLGLDKFRPPLLEMLARRWQDRCL
EVREAAQALLLAELRRIEQAGRKETIDTWAPYLPQYMDHVISPGVTAEAMQTMAAAPDAS
GPEAKVQEEEHDLVDDDITTGCLSSVPQMKKISTSYEERRKQATAIVLLGVIGAEFGAEI
EPPKLLTRPRSSSQIPEGFGLTSGGSNYSLARHTCKALTFLLLQPPSPKLPPHSTIRRTA
IDLIGRGFTVWEPYMDVSAVLMGLLELCADAEKQLANITMGLPLSPAADSARSARHALSL
IATARPPAFITTIAKEVHRHTALAANTQSQQSIHTTTLARAKGEILRVIEILIEKMPTDV
VDLLVEVMDVIMYCLEGSLVKKKGLQECFPAICRFYMVSYYERSHRIAVGARHGSVALYD
IRTGKCQTIHGHKGPITAVSFAPDGRYLATYSNTDSHISFWQMNTSLLGSIGMLNSAPQL
RCIKTYQVPPVQPASPGSHNALKLARLIWTSNRNVILMAHDGKEHRFMV
NT seq
4470 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaaacagcctcgtcctgcccattgttctctggggccgcaaagcacccacgcat
tgtatttcatcaatactgttgacagatgatgggggcaccattgtaactggatgccacgat
ggacaaatatgtctctgggatctttcagtagacctggaagttaatccccgagcactgttg
tttggtcacacagcatccatcacttgtttgtcaaaagcctgtgcctctggggacaaacag
tacactgtgagtgcgtctgcaaacggagagatgtgcctatgggacgtgaatgacggcaga
tgtattgaatttacaaagttagcctgcacacacactggcatacagttctaccaattctct
gttgggaatcagcaagaaggaaggctcctctgccacggacactaccctgaggtcctcgtt
gtggatgccaccagccttgaggtgctgtactctttggtatcaaagatctcgccagactgg
atcagctccatgagcatcatccgctctcaccggacacaagaggacactgtggtagcgctc
tccgtgacgggtattctgaaggtgtggattgttacctctgaaattagcggaatgcaggat
actgagccaatatttgaggaggaatccaaaccaatttattgtcagaattgccaaagcatc
tctttttgtgcattcacacagaggtcacttttggttgtatgctccaaatactggcgggtg
ttcgatgctggcgactactccctgttgtgttcaggtcctagtgaaaatggacagacgtgg
actggaggggactttgtgtctgcagacaaagtcatcatttggactgaaaatgggcagagt
tacatttacaaacttcctgccagttgccttccagctagtgattcattccgcagtgatgtg
gggaaagcggttgaaaatttgattcctcctgtgcagcatagcctcttggatcagaaagat
aaagagttggtaatttgtcctcctgttactcggtttttctatggatgcaaggaatatttg
cataagctactaattcagggcgattcttctggaaggttaaacatctggaacatagcagac
atagcagataaacaggaggctgatgaagggctaaagatgacaacttgtattagtttgcaa
gaggcatttgacaagctgaagccttgccctgctgggattatcgatcagctaagtgtgatt
cccaacagcaatgaacctcttaaagtaactgcgagcgtctacataccagcacacgggcga
ctcgtctgtggccgggaagatggaagcatcattattgtgcctgccacccagacggccata
gttcagctactgcaaggagagcacatgctcaggagaggttggccccctcatagaaccctc
cgtggccatcggaacaaagtcacgtgtctgctgtatcctcatcaggtctcagctcggtat
gatcaaagatacctgatatctggaggtgtggatttttctgtcataatttgggacatattt
tccggagaaatgaaacatatcttctgtgttcatggtggtgagatcacacaacttctcgtc
ccaccagaaaactgtagtgcaagagttcaacattgcatctgttctgtagccagtgaccac
tccgtgggactcctaagtctgcgagagaaaaaatgcatcatgctggcatctcgccacctc
ttccctatccaggtgatcaagtggaggcctgctgatgactacctggtggtgggctgcacg
gacggctctgtgtatgtctggcagatggacactggtgcgctggatcgctgtgcaatggga
ataacagcagtggagatactgaacgcttgtgacgaagccgttcctgcggctgtagactcg
ctcagtcacccagcagtcaacctgaagcaagccatgacaagacggagtctcgcagccctt
aaaaatatggcccaccataagctgcaaacccttgcaactaaccttctggcttctgaggcc
tctgacaaggggaatttacctaaatattctcataactccctgatggttcaagcaataaag
acaaacctaacagacccggatatccatgtgcttttctttgatgtggaagctttgattatt
cagctcctgactgaagaagcctctaggccgaataccgcacttatttccccagagaatctg
cagaaagcatctggcagttcagacaaagggggctctttcctaactggaaagcgagcggca
gttcttttccagcaagtgaaggagactatcaaagagaacatcaaggagcacctcctggat
gaggatgaggatgaggaggaggcgatgaggcagaggagggaggagagtgaccctgagtac
cgggccagcaagtccaagcccctgaccctgctagaatacaacctcacgatggatactgca
aaactattcatgtcctgtctccacgcctggggcttgaatgaagttctggatgaagtttgt
ctcgatcgcctcggaatgctgaaaccacactgcacagtgtcctttggtctcctttcaaga
ggaggtcatatgtccctgatgcttcctggttataatcaggccgctggaaaactactgcac
gcgaaagcagaagttggaaggaagctgccagcaacggagggcgtaggcaaggggacctac
acagtgtctcgagcggtcaccactcagcatctgttgtccatcatatccctggctaatact
ttaatgagtatgaccaatgcaactttcattggagatcacatgaagaagggccccaccagg
ccgcctagaccaggcaccccagacctttcaaaggcaagggattcccctccagcctccagt
aacattgtgcaaggacagattaaacaagctgcggcacctgttgtttctgctcgatctgat
gctgaccactctggttctgcctctgcctctcctgctttacatacctgtttcttagtaaat
gaaggctggagccagctagctgccatgcactgtgtaatgctgcctgatctgctggggctg
gataaatttaggcctcctcttctagagatgctagctcgaaggtggcaagatcgatgcttg
gaggtgagagaggctgcacaggctctgcttctagcagaactgagaagaattgagcaggct
ggacggaaggagactatcgacacctgggctccttacttacctcaatatatggaccatgtc
atatcacctggtgtcactgcggaagccatgcagacgatggcagctgctccagatgcctcg
gggccagaagccaaagtccaggaagaagagcatgacctcgtggatgatgacatcactact
ggctgcttgtcaagtgtcccacaaatgaaaaaaatctcgacatcttatgaagaaagaagg
aagcaggcaacagctattgttctcctgggagtgataggggcagagtttggagctgaaatt
gaaccaccgaagctgctgaccagacctcgaagctccagtcaaattcctgaaggctttggc
ttgacaagtggaggctccaactactcactggccagacacacatgcaaggcactgacgttt
cttctgctacagccacccagtcccaaacttcctcctcatagcaccatccggagaactgcc
attgacctgattgggcgagggttcactgtatgggagccttacatggacgtgtccgctgtc
ctgatggggctgctggagctctgtgcagatgctgagaaacaacttgctaacatcacaatg
gggctgcctctgagccctgcagctgactctgcccgctccgcaaggcacgccctttctctc
atcgccacagccagaccacccgccttcatcaccacgatagcgaaggaggtacacagacac
acggcccttgcagcaaatacccagtcgcagcagagtatacacaccaccacgctggcgagg
gctaagggcgaaatcctgagagtcattgaaatcctcattgaaaagatgcccacggatgtt
gtggatcttctggtggaggtgatggacgtcatcatgtactgcctggagggctctttagtt
aagaagaagggccttcaggaatgcttcccagccatctgcaggttctacatggtcagctat
tatgagcggagccacagaatcgcagttggagcacgccatggctcagtagccctgtatgac
atccggactggaaaatgtcagacaatccacggacacaagggaccaatcactgcagtgtcc
tttgctcctgatgggcgttatcttgccacctactcaaacaccgacagccacatttctttc
tggcagatgaacacctccctcctaggaagcattggcatgctgaattcagcacctcagctt
cgctgcatcaagacctaccaggtccctccagtgcagcctgcatcccctggctcccacaat
gccctcaagttggcccggctcatctggacttccaaccggaatgttatcctcatggcccat
gatgggaaggaacaccgcttcatggtctaa
DBGET
integrated database retrieval system
