Mastomys coucha (southern multimammate mouse): 116087309
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Entry
116087309 CDS
T07224
Symbol
Seh1l
Name
(RefSeq) nucleoporin SEH1 isoform X1
KO
K14299
nucleoporin SEH1
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03013
Nucleocytoplasmic transport
mcoc04150
mTOR signaling pathway
mcoc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116087309 (Seh1l)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
116087309 (Seh1l)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
116087309 (Seh1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcoc03019
]
116087309 (Seh1l)
04131 Membrane trafficking [BR:
mcoc04131
]
116087309 (Seh1l)
Messenger RNA biogenesis [BR:
mcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116087309 (Seh1l)
Membrane trafficking [BR:
mcoc04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
116087309 (Seh1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
116087309
NCBI-ProteinID:
XP_031221811
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MFVARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGDWHCTASWKTHSGSV
WRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVK
FAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEISCKLCCSCISWNPSSSRAHPP
MIAVGSDDSSPNSMAKVQIFEYNENTRKYAKAETLMTVTDPVHDTAFAPNLGRSFHILAV
ATKDVRIFTLKPVRKELTSSGGPTKFEIHIVAQFDNHNSQVWRVSWNITGTVLASSGDDG
CVRLWKANYMDNWKCTGILKGNGSPVNGSSQLGNSNPSLSSNIPNLQNSLNGTSAGRYFF
PPLDSPRAGSRWSSCAQLLPPPAPLLEHSCDADTANLQYPHPRRGYLSRPLNPLPENEGV
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtggcgcgcagcatcgcggcggatcacaaggacctcatccacgatgtgtctttc
gacttccacgggcgccggatggccacctgctccagcgatcagagcgtcaaggtgtgggat
aagagtgagagcggagattggcattgtacagctagttggaagacacatagtggatctgta
tggcgtgtgacgtgggctcatcctgaatttggacaagttttggcttcctgttcttttgac
cgaacagcagctgtatgggaagaaatagtaggagaatcaaatgataaacttcgaggacag
agtcactgggtgaagaggaccactctcgtggacagcaggacatctgttactgatgtgaaa
tttgctcccaagcatatgggtctgatgttagcaacctgttccgcagatggtatagtaaga
atatatgaggctccagatgttatgaatctcagccagtggtctctacagcatgagatctca
tgtaagctgtgctgcagttgtatttcttggaacccttccagctctcgtgctcatcccccc
atgatcgctgtgggaagtgatgacagcagtccaaattcaatggccaaggttcagattttt
gaatacaatgaaaataccaggaaatatgcaaaagcagagactcttatgacagtcacggat
cctgttcatgatactgcgtttgctccaaatttgggaagatctttccatatcctggcagta
gcaaccaaagatgtaagaattttcacattgaaacctgtgaggaaagaacttacttcttct
ggtggcccaacaaaatttgaaatccacattgtggctcagtttgacaatcataattctcag
gtctggagggtgagttggaacataacaggaacagtcctggcgtcttcaggagatgacggc
tgtgttcggttgtggaaagctaattacatggacaattggaagtgtactggtattttgaaa
ggtaacgggagcccagtaaatgggagttctcagctgggaaactcaaatccttcactgagc
tcaaatattccaaatcttcaaaattcattaaatggaacttctgctggcaggtatttcttt
ccccctctggattccccacgggctggatcaagatggtccagctgtgcccagctccttcct
cctcctgctcctctgctagagcactcttgcgatgctgacactgccaacctccaatatcct
caccctcgcagaggatacctctctcggcctcttaatcccttacctgagaatgaaggggtg
taa
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