Mastomys coucha (southern multimammate mouse): 116087350
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Entry
116087350 CDS
T07224
Symbol
Myo5b
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
116087350 (Myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcoc03019
]
116087350 (Myo5b)
04131 Membrane trafficking [BR:
mcoc04131
]
116087350 (Myo5b)
03029 Mitochondrial biogenesis [BR:
mcoc03029
]
116087350 (Myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mcoc04812
]
116087350 (Myo5b)
Messenger RNA biogenesis [BR:
mcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
116087350 (Myo5b)
mRNA cycle factors
P-body specific factors
116087350 (Myo5b)
Membrane trafficking [BR:
mcoc04131
]
Others
Actin-binding proteins
Myosins
116087350 (Myo5b)
Mitochondrial biogenesis [BR:
mcoc03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
116087350 (Myo5b)
Cytoskeleton proteins [BR:
mcoc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
116087350 (Myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
HalX
nSTAND3
Myosin_N
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
116087350
NCBI-ProteinID:
XP_031221899
LinkDB
All DBs
Position
Unknown
AA seq
1843 aa
AA seq
DB search
MWWILDGEYSKQGCSFQMDPRGSSSSMLHYNTWQYTRVWIPDPDEVWRSAELTKDYNEGD
KSLQLRLEDDTILEYPVDVQNNQVPFLRNPDILVGENDLTALSHLHEPAVLHNLKVRFLE
SNHIYTYCGIVLVAINPYEQLPIYGQDVIYAYSGQNMGDMDPHIFAVAEEAYKQMARDEK
NQSIIVSGESGAGKTVSAKYAMRYFATVGGSASDTNIEEKVLASSPIMEAIGNAKTTRND
NSSRFGKYIEIGFDKKYHIIGANMRTYLLEKSRVVFQADDERNYHIFYQLCAAASLPEFK
ELALTCAEDFFYTAHGGNTTIEGVDDAEDFEKTRQALTLLGVRESHQISIFKIIASILHL
GSVEIQSERDGDSCSIPPQDEHLSNFCRLLGIEHSQMEHWLCHRKLVTTSETYVKTMSLQ
QVVNARNALAKHIYAQLFSWIVEHINKALQTSLKQHSFIGVLDIYGFETFEINSFEQFCI
NYANEKLQQQFNSHVFKLEQEEYMKEQIPWTLIDFYDNQPCIDLIEAKLGILDLLDEECK
VPKGTDQNWAQKLYERHSNSQHFQKPRMSNTAFIVNHFADKVEYLSDGFLEKNRDTVYEE
QINILKASKFPLVADLFHDDKDSVPATNTAKNRSSSKISIRSSRPLMKVPNKEHKKSVGY
QFRTSLNLLMETLNATTPHYVRCIKPNDEKLPFHFDPKRAVQQLRACGVLETIRISAAGY
PSRWTYHDFFNRYRVLMKKRELTNTDKKNICKSVLESLIKDPDKFQFGRTKIFFRAGQVA
YLEKLRADKFREATIMIQKTVRGWLQKVKYRRLRAATLTLQRFCRGYLARRLAEHLRRTR
AAIVFQKQYRMLKARRAYLRIYRATVIIQSFTRGMFVRRSYLQVLKEHKATIIQKYARGW
MARRHFLRQRDAAIVIQCAFRRLKAKQELKALKIEARSAEHLKRLNVGMENKVVQLQRKI
DDQNKEFKSLSEQLSAVTSTHAMEVEKLKKELAHYQQNQEADTSLQLQEEVQSLRTELQK
AQSERRVLEDAHNKENGELRKRVADLEHENALLKDEKEYLNNQILRQSKAESSQSSVEEN
LLMKKELEEERSRYQNLVKEYSQLEQRYETLRDEQTPGHRKNPSNQSSLESDSNYPSIST
SEIGDTEDALQQVEEIGIEKAAMDMTVFLKLQKRVRELEQERKKLQVQLEKEQQDSKKVQ
AELQNNGLDVDQDADIAYNSLKRQELESENKKLKNDLNELRKAVADQAMQDNSTHSSPDS
YSLLLNQLKLANEELEVRKEEVLILRTQIMNADQRRLSGKNMEPNINARTSWPNSEKHVD
QEDAIEAYHGVCQTNRLLEAQLQAQSLEHEEVVEHLKAQVEALKEELDKQQQTFCQTLLL
SPEAQVEFGVQQEISRLTNENLDFKELVEKLEKNERKLKKQLKIYMKKVQDLEAAQALAQ
SDRRHHELTRQVTVQRKEKDFQGMLEYHKEDEALLIRNLVTDLKPQMLSGTVPCLPAYIL
YMCIRHADYTNDDLKVHSLLSSTINGIKKVLKKHNDDFEMTSFWLSNTCRFLHCLKQYSG
DEGFMTQNTAKQNEHCLKNFDLTEYRQVLSDLSIQIYQQLIKIAEGLLQPMIVSAMLENE
SIQGLSGVRPTGYRKRSSSMVDGENSYCLEAIVRQMNSFHTVLCDQGLDPEIILQVFKQL
FYMINAVTLNNLLLRKDACSWSTGMQLRYNISQLEEWLRGKNLHQSGAVQTMEPLIQAAQ
LLQLKKKTHEDAEAICSLCTSLSTQQIVKILNLYTPLNEFEERVTVSFIRTIQAQLQERN
DPQQLLLDSKHVFPVLFPYNPSALTMDSIHIPACLNLEFLNEV
NT seq
5532 nt
NT seq
+upstream
nt +downstream
nt
atgtggtggatcttggatggggaatacagtaagcagggatgctccttccagatggatcca
agaggtagtagctcttctatgctgcactataatacatggcagtacacaagggtctggatc
cccgacccagatgaagtgtggcgctcggctgaattaaccaaggactacaacgagggtgat
aagagcctgcagctcagactggaagatgacacaattctggagtacccagtcgatgtccaa
aataaccaggtgccattcttgcggaatccagatatcttagtaggagagaacgaccttact
gcactcagccatctccacgagcccgcagtgctgcataacttaaaggtccgtttcctggaa
tccaaccacatctacacttactgtggaattgtgcttgttgccatcaatccctacgagcag
ctgccaatctacggacaggatgtcatctatgcctacagtggccaaaacatgggtgacatg
gacccccacatctttgctgtggcagaagaagcctacaagcagatggccagagatgaaaag
aaccagtccatcatagtcagcggggagtctggagcagggaagacggtgtcggccaagtat
gccatgcgctattttgccacagttggcggctcggccagtgataccaacattgaagagaag
gtcctggcatccagtcccatcatggaggccattgggaacgccaagaccactcgcaacgac
aatagcagccgatttgggaagtacattgagattggctttgataaaaagtaccacatcatt
ggggccaacatgaggacctacttgctggagaagtctagggtggtctttcaggcggatgat
gagaggaactaccacatcttttaccagctctgtgccgctgccagccttcctgaatttaaa
gagctcgctctgacatgtgcagaggactttttctatacagcccatggaggaaatacaacc
atcgagggcgtggatgatgcagaggactttgagaagactagacaagccctcacgctcctt
ggagtgcgggagtcccatcaaataagcatctttaagataattgcttctatcttgcacctt
ggaagtgtggagattcagtccgagcgggacggggattcctgcagcattcccccccaggat
gaacacttgagcaacttctgccgcctgctaggaatagagcacagccagatggagcactgg
ctatgtcatcggaagctggtcaccacctcagagacctacgtcaagacgatgtccctgcag
caagtagtcaatgcgcgcaatgccctggccaagcacatctatgcccagctgttctcctgg
attgtggagcacatcaacaaggccctgcagacctcccttaagcagcactccttcatcggg
gtcctggatatctacgggtttgagaccttcgagatcaatagctttgagcagttttgtatc
aactacgccaatgaaaagctccagcaacagttcaattcgcatgtgttcaagctggagcaa
gaagaatacatgaaggagcagatcccgtggaccttgattgacttttatgataaccagccg
tgtatagacctcatagaagcaaagctgggtatcctggacctgttggatgaggagtgtaag
gtccccaaaggaactgatcagaactgggcccagaaactctacgaacgacactccaatagc
cagcacttccagaaaccacgcatgtccaacacggccttcattgtcaaccactttgcagat
aaggtggagtacctttcagatggttttctggagaaaaacagggatacagtatatgaagaa
cagatcaacatcctgaaggccagcaagttcccactcgtggctgacttgttccacgatgac
aaggactctgttccagccaccaacacagctaagaatcgatcatcttcaaagatcagcatt
cgctcttccagacccctcatgaaagtccctaacaaggagcacaagaaatccgtgggctac
cagttccgcacttccctaaacctgcttatggagaccctgaacgccacaacgccacactac
gttcgatgcatcaagcccaatgatgaaaagctccccttccacttcgacccaaagagagct
gtgcagcagctccgagcctgcggcgtgctggagaccattcggatcagcgcggcaggctac
ccatccaggtggacctaccatgacttcttcaaccggtatcgggtgttgatgaagaagaga
gagctcaccaacaccgacaagaagaacatctgcaagtccgtcctggagagtctcatcaag
gatccagacaagttccagtttggccgcaccaagatcttcttccgggcgggccaggtggcc
tacctggagaagcttcgagcagacaagttccgggaggctaccatcatgatccagaagacg
gtcaggggctggctgcagaaagtgaagtaccgtaggctgagggcagctaccttaaccctg
cagaggttctgcagagggtacctagcccgcaggctggctgagcacttgaggagaacccgc
gcagccatagtgttccagaagcagtaccgaatgctgaaggcccgccgagcctacctcagg
atctacagggccacagtcatcattcagtccttcacacggggcatgtttgtgcgtaggagc
tacctccaggtccttaaggagcacaaagccaccatcatccagaagtatgcccggggctgg
atggcacggagacattttctgcggcagcgggatgcagccattgtcatccagtgtgccttc
cggaggctcaaagccaagcaggagctcaaggccctcaagatcgaggcccgctcggcggag
catctgaaacgcctcaatgtgggcatggagaacaaagtcgtccagctacagcggaagatt
gatgaccagaacaaagagttcaagagtctatcagagcagctgtctgcagtcacctctacg
catgccatggaggtggagaagctgaagaaggagctggcgcattaccagcagaaccaggag
gctgataccagccttcagctgcaggaggaggtgcagagcctgcgcactgaactacagaag
gctcagtcggagcgcagggtcctagaggatgctcacaacaaggagaatggagagctgaga
aagcgagttgcagacctggaacatgaaaacgctctcttaaaggatgaaaaagaatacctt
aacaaccaaatcctgcgccagtcaaaagctgagtcctcacagagctctgtggaggagaac
ctcctgatgaagaaggaactggaagaggaacggtccaggtaccagaaccttgtgaaggag
tactcccagctggagcagagatatgagacccttcgggacgagcaaactccgggccacagg
aagaacccatcaaatcagagtagcttagaatctgactccaattacccctccatttccact
tcagaaatcggagacaccgaggatgcccttcagcaggtggaggagattggcatagagaag
gcagccatggacatgaccgtcttcttgaagctgcagaagagagtgcgggaacttgagcag
gagaggaagaagctgcaggtgcagctagaaaaggaacagcaggacagcaagaaagtgcag
gcagaactacagaacaatggcttagatgtggaccaggatgcagatatagcctacaatagt
ctgaagagacaagagctcgagtcggagaacaagaagctgaagaatgatctgaatgagctg
aggaaggccgtagctgaccaagccatgcaggataactccacccacagctccccagacagc
tacagcctcctactgaaccagctcaagctggccaacgaggagctcgaggtccgcaaagag
gaggtgctgattctcaggacccagattatgaatgctgaccagcgccgactgtctggcaag
aacatggagccgaacatcaatgccagaacaagctggcccaacagtgagaagcacgtggac
caggaagatgccatcgaggcctaccacggggtctgtcagacaaacaggttgctggaggca
cagctgcaggcccagagcctggagcatgaggaggtggtggaacatctcaaggcccaggtg
gaggccctgaaggaggagttggacaaacagcagcagaccttctgccagactctgctgctg
tccccagaggcccaggtagagtttggtgtccagcaggagatatcaaggctgaccaatgag
aacctggattttaaggaattggtagaaaagctggagaagaatgagaggaagctgaaaaag
cagctgaagatttacatgaagaaagtccaggacttagaagctgcccaggcattggcacag
agtgacaggaggcaccatgaactcacaagacaggtcacagtccaacgaaaagagaaggac
ttccaaggcatgctggagtaccacaaagaggacgaggccctcctcatccggaacctggtg
acagacctgaagccccagatgctgtcgggcaccgtgccctgcctgcctgcatacatactc
tatatgtgcatcaggcatgccgactacaccaacgatgacctcaaggtgcactcgttgctg
agctccaccatcaatggcattaagaaagtcctcaagaagcacaatgacgactttgagatg
acatcattctggttatccaacacctgccgctttcttcactgtttgaagcaatacagcggt
gatgaggggttcatgacacagaacactgcgaagcagaatgagcattgcctcaagaacttt
gacctcactgaataccgtcaggtgctaagcgatctttccattcagatctatcagcagctc
attaaaattgccgagggcttgttacaacctatgatagtttctgccatgttggaaaatgag
agtatccaggggctgtctggtgtgaggccaactggttaccggaagcgctcctccagcatg
gtggatggagaaaattcctactgcctggaggccatcgtccgtcagatgaattcttttcat
acagtcctgtgtgaccagggcctggaccctgagattatcctgcaggtgttcaaacagctc
ttctacatgatcaacgctgtgactcttaacaacctactcctgcggaaagatgcctgctcc
tggagcacaggcatgcaactcaggtacaacataagtcaactcgaagagtggcttcggggc
aaaaaccttcaccagagcggagcagttcagaccatggagcccttgatccaggcagcccag
ctcctccagctgaagaagaaaacccatgaggatgccgaagccatctgctcgctgtgcacc
tccctcagcacgcagcagattgtcaaaattttaaacctctacactcccttgaatgaattt
gaagaacgggtcacagtgtccttcatacgaacaatccaggctcagctacaagagaggaat
gaccctcagcaactactgctggactccaagcacgtgtttcccgttctgttcccatataac
ccatccgctctgaccatggactcgatccacatcccagcctgtctcaatctggagtttctc
aatgaagtctga
DBGET
integrated database retrieval system
