Mastomys coucha (southern multimammate mouse): 116087413
Help
Entry
116087413 CDS
T07224
Symbol
Ctdp1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase isoform X1
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mcoc01009
]
116087413 (Ctdp1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcoc03021
]
116087413 (Ctdp1)
Enzymes [BR:
mcoc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
116087413 (Ctdp1)
Protein phosphatases and associated proteins [BR:
mcoc01009
]
HAD phosphatases
Fcp/Scp phosphatases
116087413 (Ctdp1)
Transcription machinery [BR:
mcoc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
116087413 (Ctdp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCP1_C
BSH_Fcp1
NIF
BRCT
PTCB-BRCT
Biotin_lipoyl
LIG3_BRCT
RTT107_BRCT_5
BSH_CusB
Motif
Other DBs
NCBI-GeneID:
116087413
NCBI-ProteinID:
XP_031221992
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MEVPPAAGVPTECTPAVAGAEVRCPGPTPLRLLEWKVAAGATVRIGSVLAVCEAAASPQP
AGPTPARVASGGCVRAARAERRLRSERAGVVRELCAQPGQVVAPGALLVRLEGCSHPVVM
KGLCAECGQDLTQLQSKNGKQQVPLSTATVSMVHSVPELMVSSEQAEKLGREDQQRLHRN
RKLVLMVDLDQTLIHTTEQHCPQMSNKGIFHFQLGRGEPMLHTRLRPHCKDFLEKIAKLY
ELHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCI
IDDREDVWKFAPNLITVKKYVYFPGTGDVNAPPGARESQTRKKVNHSSKGGDVLEQALSV
KGPEEGKPAPGMEQSNGLGTASRELNGGEAVPGAFPSKADEKEAWSLTRASPASSSSGHE
LTEAPELPVSCEWDGRTTPAVQPPQGDATQDLDFDLSSDSESSESSRSEGQKSSSASDGE
NEERRLRKKSPATQERTKVPQHSGPQDTSGGRSAASPVGESGPSIHSHDKGSDLDPQEEG
ERDSLCGLGNGSVDRKEAETESQNSEQSGVTAGESLDQSVGEEEEEDTDDDDHLIHLEEI
LVRVHTDYYAKYDRYLNKELEEAPDIRKIVPELKSRVLADVAVIFSGLHPTNFPVEKTRE
HYHATALGAKVLTQLVLNPDAPDRATHLIAARAGTEKVRQAQECKHLHVVSPDWLWSCLE
RWDKVEEQLFPLMDDDTRTHRDNSPAAFPDRHTVLPAALFHPTPIHSKAHPGPEVRIYDS
NTGKLIRMGTQGSAPAPSSAPLIHGEPSSFRAVQPHQQQMFGEELPESQDGEQPGPARRK
RQPSMSETMPLYTLCKEDLESMDKEVDDILGEGSDDSDSEKKKPEDQDNEQERAPKPRKP
RTPGIRREQPVGLPSSVERSTTGMRGPRGHKRKLNEEDAASESSGESSNDDEEGSSSEAD
EMAAALEAELNDLI
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgccgcctgcggccggcgttcccaccgagtgcactccggcggtggccggggca
gaggtgcgctgcccgggccccacgccgctgcgtctgctggagtggaaggtggcggcgggc
gcgaccgtgcgcatcggctccgtgctggcagtgtgcgaagccgcagcctccccgcagccc
gcagggccgaccccggctcgcgtggcctctgggggctgcgtgcgcgcagcgcgggccgag
cgcaggctcaggtcggagcgcgccggcgtggtccgtgaactgtgtgcgcagcctggccag
gtggtggcccctggagcacttctggtgaggttggaagggtgcagccatcctgttgtcatg
aagggcctgtgtgcggagtgtggccaggacctgacccagttgcagagtaaaaatggaaag
cagcaggtacccctgtctacagcgactgtttccatggtgcacagcgtgcccgagttgatg
gtgagctctgagcaagctgaaaaactaggaagagaagatcagcagcgactacatcgaaac
agaaaactagttctcatggttgacttggaccagaccctgattcatacgactgagcagcac
tgtccccagatgtccaacaaaggcatcttccacttccagctgggccgaggggagcccatg
ctgcatacccgcctgaggcctcactgcaaggacttcctggagaaaattgccaagctgtat
gagcttcatgttttcacttttggcagccgtctgtatgcccacaccatcgcaggctttctg
gaccctgagaagaagcttttttctcatcgaatattgtctcgagatgaatgtattgaccca
ttttctaaaacaggaaaccttagaaatctctttccctgtggagactcaatggtttgcatc
attgatgaccgagaggatgtgtggaagtttgcccctaaccttataactgtgaagaagtac
gtctacttcccaggcacgggtgatgtcaatgcaccccctggggcccgggaatcccagaca
aggaaaaaagtaaatcattcttctaaaggaggagacgtcttggaacaagctctgtcagtg
aagggtcctgaggaaggcaaacctgctcctgggatggagcagagcaatggccttgggacg
gcctcccgggagctcaatggtggtgaggccgtgccaggagctttccccagtaaagcagat
gagaaggaggcctggtccctcacccgggcctctcctgccagcagctccagtggccatgag
ctgacagaagctccagagctccctgtgtcttgcgagtgggatggtcggacaacaccagcg
gtgcagcctcctcagggagacgccacccaggacttggactttgacctgtccagtgacagc
gagagcagcgagagcagcagatcagaaggtcagaagtcctcctctgcttctgatggggag
aacgaggagaggagactcagaaagaagtctccagccacccaggagagaacaaaagttcca
cagcacagtgggccccaggacacgagtggggggagatctgcagcaagccccgtgggagag
tctgggcctagcatccactcacatgacaaaggatcagacctggatcctcaggaggagggt
gaacgggacagcctctgtggcctgggcaatggcagtgtggaccggaaggaagctgaaaca
gagtcacagaacagtgagcagtcaggcgtcactgcaggcgagtccctagaccagagtgtc
ggggaggaagaggaagaggacacagatgacgatgaccacttgatccacctcgaggagatc
ctcgtccgagtacacactgactattacgcgaaatatgacagatacctcaacaaggagctt
gaggaagctccagatatacggaaaattgtgccagagctcaagagcagggtgctagcagat
gtggctgtaatattcagtgggctgcacccaacaaactttcctgtggaaaagacccgtgag
cactatcatgccacggccctgggagccaaggtcctcacccagctggtgctgaaccctgac
gctccagacagggccactcacctcattgcagctcgggctggtacagagaaggtgcgccag
gcacaggaatgcaaacacctacatgtggtcagccctgattggctgtggagctgcttggaa
cgctgggacaaggtagaggagcagctcttcccactcatggatgatgacacccggacacat
agggataacagccctgcagcctttcctgacagacacactgtgcttccagcagccttgttc
cacccaacacccatccattccaaggcccatcctggtcctgaggttcggatctatgactct
aacacaggcaagctcatccggatgggcacccagggttctgcaccagctccctctagtgcc
ccgcttatccatggagagccttcctccttcagagctgttcagccacatcagcagcaaatg
tttggcgaagagctgccagaatctcaagatggagagcagcctggccctgctagaagaaag
cgacaacccagtatgtcagagacaatgccgctgtacactctctgtaaggaggacttagag
agtatggacaaagaggtcgatgacatccttggagaaggcagtgatgacagtgacagtgag
aagaagaagccagaagaccaagacaatgaacaggagagagcaccaaagcccaggaagccc
aggaccccagggatccgaagagagcagccagtagggttgccctcatctgttgagaggagc
accactggcatgcgtggacccagaggccacaagagaaaactgaatgaggaagacgctgcc
agcgagtccagcggggagtccagcaacgatgacgaggagggcagcagttcggaagcagac
gagatggccgctgctctggaggcggagcttaatgacctcatatga
DBGET
integrated database retrieval system
