Mastomys coucha (southern multimammate mouse): 116087444
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Entry
116087444 CDS
T07224
Symbol
Rttn
Name
(RefSeq) rotatin isoform X1
KO
K16484
rotatin
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mcoc03037
]
116087444 (Rttn)
Cilium and associated proteins [BR:
mcoc03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
116087444 (Rttn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RTTN_N
Motif
Other DBs
NCBI-GeneID:
116087444
NCBI-ProteinID:
XP_031222074
LinkDB
All DBs
Position
Unknown
AA seq
2257 aa
AA seq
DB search
MVLAGLIRKLGHQLAEIRERALKSILCKIEHNLICYADLIQERLLFLHLLEWFNFPSVPM
KEEVLNLLSRLVKYPPAVQHLIDLGAVEFLSKLRPNVEPAIQAEIDGILDGLFILPSEVP
ALCSSTYHTDQIELSQQPEVLTGYFPQDKSNFQQMEVPSGPAGNPTTVKWLRFSVFPWLP
LTTTDRHVLSSNESSLRSSNHTLIWNTCELLKDVIMQDFPAEIFLQRPKIVQGLLGLVKL
AFGGDGKHRLALQSVSCLQQLCTSLRNRLNFYRDPNLFANKQDTISQNSSLSYCHEARGP
YHSPNPSPGSSSSRPSVVGRTGQRPRGDGQDWDAVSSSGSSSHAHVNSRISVHSPLDVAH
VDLPELEAEDALELQFQQLSLPQFCISILEAAVPLLRTGSREMIIRVLELLAEDMLLIGQ
AISSEIWDDNNLFAIDVKEKLLQVLESLGETMCYRKTSFNLEQAEAVLVHHRMAFVSISL
FTVRLLQILLPVEKASEFLPESMSAALFFVSLDMPISLEYPEIHDTVVAYLEQLDSENYS
IYKRTAEAVYSIECTCNFLSDVGKEGEKNLLELVELADQALRSFSYHQHSPLIKEIIYIC
SKIWKSAQASPLLQGESQKVFLHMLSHPLPQVKVETYQCCLEIVKECLGVHNVTKPVSSL
CSGIHFLLHPKVLYEISAFGMQESKNEQVNVAAKTILLYLLQGRLMMTALTWNKFIESLC
PVIPVLQGYADTEDPLGNCILLLSNVSSEAEEGILPCTTQLKSVLRLLLVKKPAVRSLAL
KLLASHLSSEEGADKKRPFIDARVLSRVTNLFIVKRPIDLKLDDRRELVIKLETVKKVYE
IFTSDDVDLVLRKSAAEQLAVIMQDIKMHAVVKKLCLVEKIIQYLNEFVSQDGKVIECLI
QPCLTLLRKVLYADPVIRVSLSQQASLLTLLLRVSLILHEDCTVVAEVGALFCLLLFDEV
SRMDTWSDNLSNKPSLSPVFSLPVSVFRRYHLPVHVIGHHAVSPYSIVLPLSTECLALKP
VSDMLRIAWNLAWYHGSDNLLKQMTSEAKIQEFVDTLQLSTEDILTLKITYTDSGLKDCL
QSIVQAGGHRDVRAAITRMSFYLLNDKLSLKDDIGPCGVTLKSLAWHTVLNRFLQVLPAC
TEDEKLLIDIIHFLNKLIKEQRKNPSIELLNWILELLLRHNPNPLLDLLVLTESHAREET
DDVQTAVRQQLQKELISLLNSLLLVFMTVSDRKCLELFSVFQTQLSLKLLQCLRVTDAPH
FYGLPSLERTLAGMAHLTSFPGWSAHSPLSKPLEICGKYLSGLLEVITSFYVERGGNAMS
FMGKGVTKSTILCLLHLSHEMIVQAPSSEWMPLWFLPLGSHSEEHAPTQQGLAWLIPLWV
DRDPEVRFTSLGLGSALTTIEAGCVALADSCQNISGGLWGTVVNILLDQSECSMVRREAA
FILQNLLVIPMPSEVTKDYTWQGPCVHDEDSGLSLSGKPALQALLYHCRFYEHLTHMVKH
CYIGRYMFDFNFSAFTETSEYSDLNGLDDSFKFWRAPSGTSSQNHEPSSLSTSETMVAAS
VVNAEIQPPLPSTLLPETALDQFVTQGQRELRPVQPHDSSMSASLHRQYVLVTPSLLSAI
CSLLDNLLAVTPRDAANAFQQAHLIELLCSTVDASLIEMCIQDLKTPQPLPSAVEHTQAQ
ASFFLEYLSSLSQLLKSCLLVEPELVTQDELLKPLMTNVIRVLIVCTKDVLDVQLVLTFY
RTWTHLFDLLATLLRKAGAVSLVPLTSALAKHWEAVTDTLCRCVGLSVQCPALSIASLQF
LSVLLAEEEKRRVQYKEKINDCQAPAVASLLDGTQGSLRSSEQLNETILQCYEGISPKDV
LKRVAANALMSLLAVSRRAQKHALRSDLIENCMEQMKHINAQLNLDLLRPGKAALKKKED
GFIKELSIAMQLLRNCLYQNEECKVAALEARLVPVLHSLWPWLLMEDSLMQIALQLLCVY
TANFPTGCSSLCWSNYGQYIQTAHRGTPSSSLILCILKLASQMPAENTTIQQMVFMFLSN
LALSHDCKGIIQKSNFLQHFLSLTLPKGGNQHLSNVAILWLKLLLNMSFGEDGQQMILRL
DGCLDLLIEMSKYKHKSSPHMPLLIFHNICFSPANKPKILANVLSIWIQLERSHFSSSLT
LDLNGLSRHRSEKVVTLLASCLESESQNAQRIGAASLWALTYNYQKAKATLKNPSIKRKV
DEAYSIAKRTISNSEEDPLNSYYLKCLENLVQLLNYS
NT seq
6774 nt
NT seq
+upstream
nt +downstream
nt
atggttctggcggggctcatcaggaaactcggccatcagctggcggagatcagggaacgt
gccctcaaaagtatactgtgcaagatcgagcacaacttgatctgctatgctgacttgatt
caggaaaggttgctttttctccatttgctcgaatggttcaatttcccatctgtcccaatg
aaagaggaggttctgaacttgttaagcagattggttaagtatcctccagctgtccaacac
ttgattgaccttggtgcagtagaattcttatctaagctccgtccaaatgtggagccagca
atacaggctgagattgatggcattctcgatggacttttcattcttccttcagaagttcct
gcactgtgttcttccacttaccacactgatcaaattgaattgtcacaacaacctgaagtt
ttaacaggatatttcccccaagacaaaagtaatttccagcagatggaagtaccatcaggg
ccagcaggaaacccgacgactgtgaagtggctgaggttctctgtgttcccttggctaccc
ctgaccacaacagacagacatgttctttcttccaatgaaagctctttgagaagtagtaac
cacactctgatctggaacacctgtgaacttctgaaggacgtgatcatgcaagactttcct
gctgagatttttcttcagaggccaaagattgttcagggtcttttgggtctggtgaagctt
gcctttggaggagatgggaagcatcgtctggcattacagtcagtgtcctgtttgcagcag
ctgtgcacaagcttaagaaacagactcaacttttacagagaccccaacctttttgcgaat
aaacaagacacaatctcccagaattcttctttgtcttactgtcatgaagcaagaggtcct
taccattccccaaacccatccccaggaagcagtagctctcggccttctgtggttgggcgc
acaggccagcgaccccgaggagatggccaggactgggatgcggtatcttccagtggaagt
agtagtcacgcacatgtgaactctaggatatctgtgcattctcctttggacgtggcacat
gtagatctgccagagctggaagcagaggatgcactggagctgcagttccagcagcttagt
cttcctcagttctgcatctccatcctggaggcagcagttcctctgctgagaacaggcagc
agagagatgataataagagttctggaacttcttgcagaggatatgctactcattggacaa
gcaatttcatctgaaatctgggatgataacaacctctttgctatagatgtgaaagagaaa
ctactccaagtgttggagtcccttggagaaaccatgtgctaccgtaaaaccagttttaac
ttggagcaagcagaggctgtactagtgcaccacaggatggcttttgtcagcatctcactg
ttcacagttcgactgttgcaaattcttctccctgttgaaaaggcgagtgagtttttgcca
gagtccatgtcagcagcattattttttgtctcgttggacatgcctatttctttggaatat
ccagagattcatgatactgttgtggcttacttggaacagctggattctgaaaattacagc
atttataagcgaactgcagaggctgtttattcaattgagtgtacctgtaacttcctgtct
gatgtggggaaagagggagaaaagaatcttctggaattagtggagctggcggaccaagcc
ttgcgtagcttttcctatcatcagcattctcccctaataaaggaaatcatctacatttgt
tcaaagatctggaaatctgcacaggctagtccattactccagggagagagtcagaaggtg
tttcttcatatgctgtctcacccattgccacaggtgaaggtggagacttaccagtgctgc
ctggagattgtgaaggaatgtttaggtgtccataatgtcactaaacctgtgtcttcactt
tgtagtggaattcattttctgcttcatccaaaagttctatatgaaatctctgcatttggt
atgcaagaatccaaaaatgagcaggtgaatgttgctgccaagaccattctgctatatctg
cttcagggacgattgatgatgacagctctgacctggaacaagtttatcgaatctctctgt
cctgtcattccagtgctacagggctatgctgatacagaagatcctttaggcaactgcatt
ctccttctaagcaacgtgagttctgaggcagaagaaggcattctcccctgcactacccag
ctgaagtctgtgctacgacttttgctagtaaaaaaacctgcggttcgttcactagcatta
aaacttttagcatctcatcttagcagtgaagaaggggctgataaaaagcgcccattcata
gatgctagagttctctccagagttactaatttgtttattgtgaaaagacctattgacctt
aagttggatgacagaagagaactagttattaagttggagactgttaaaaaggtgtatgaa
atcttcacctcagatgatgttgatcttgttttaagaaagtcagctgcagagcaactagct
gtgataatgcaagatattaaaatgcatgctgtggtgaaaaagttatgcttagttgagaag
attattcaatatttaaatgaattcgtgagtcaagatggcaaggttatagaatgcttgatt
cagccatgcctcacactcctgaggaaggttttgtatgctgacccagttatccgtgtttcc
ttgtcacagcaggcctctctcttgaccctgttactcagagtttccttgatacttcatgaa
gattgtactgtggtggctgaagtcggggcattgttttgtcttctattgtttgatgaagta
tcaagaatggatacgtggtccgataatctttctaataagccttctttgtcaccagtcttc
agtttgcctgtttcagtctttagaagatatcatctaccagttcatgtgattggccaccat
gctgtgagtccttactcaatagttttgccattatctactgaatgtttggccctgaagcct
gtgtcagatatgctgagaatagcttggaacctggcatggtatcatgggagtgataattta
ttgaaacaaatgacctctgaagctaaaattcaagaatttgtagatacactgcagctgtcc
acagaagatattctgacactgaagatcacatacacagatagtgggctgaaggactgcctt
cagtccatcgttcaggctggaggccacagggatgtgagggctgctattaccaggatgagt
ttttatcttttgaatgacaaactgtctttgaaggatgatattggtccatgtggagttact
ttaaaatccttggcctggcacactgtgctgaacaggtttttacaagttcttcctgcttgc
actgaagatgagaaactgctaatagatatcatacattttttgaataagttaataaaggaa
caaaggaaaaacccatcaatagaacttttaaactggattctggaattacttcttaggcat
aatccaaacccactattagacctgctggttctgacagagtcacatgcccgagaagaaaca
gatgacgtccagactgctgtcagacagcaactccagaaagaactgattagtcttctcaat
tccttgttgctggttttcatgacagtctctgacagaaaatgcttggaactgttttccgtt
ttccaaacacagctgtctctgaagctactccagtgcctcagagtcacagatgctccccat
ttctatggcttaccttcattggagcggaccttagcaggcatggctcacctcacttccttc
cctgggtggagtgcacactctcctctttcaaagccacttgagatttgtgggaagtacttg
tcaggtctcctggaggtaattacttctttttatgttgaacggggaggaaatgctatgtcc
ttcatggggaaaggtgttacgaagagcacaattctttgcttacttcacttatcccatgag
atgatagtccaggcaccaagttcggagtggatgccactttggttcttgcctttgggtagt
cacagtgaagaacatgcccctactcagcaaggattggcctggctgattcccttatgggtt
gatcgagacccagaggtgagattcacttcactggggttgggatcagcactgactactatt
gaagctggctgtgttgccttggcagacagttgtcagaatatttctggtgggctgtgggga
acggtggtgaacattcttctggatcagtcagaatgcagtatggtacgccgggaggctgcg
tttattcttcagaatctccttgtaattccaatgccttcagaagttacaaaggattatact
tggcagggtccctgtgtccatgatgaggattctggcctgtcactttcaggaaaacctgcc
ctccaggcccttttgtatcactgccgtttctatgaacatttgactcacatggtaaaacat
tgttacataggaagatatatgtttgattttaatttttctgcttttactgaaacttcagaa
tacagtgatttaaatggtttagatgactcattcaagttttggagggccccctctgggaca
tctagtcagaatcatgagccaagctctctttccacctcagaaacaatggtggcggcctct
gtggtcaatgctgagattcaacccccgctgccatcaacacttcttcctgaaactgcactt
gaccagtttgtcacgcaaggtcaacgtgaactcagaccagtgcaacctcatgactcatcg
atgtctgcttccctgcacaggcagtatgtgttggttactccgtctctgctgtcagcaatc
tgtagccttttagacaacctcttggcagttactccaagagatgctgcaaatgcttttcaa
caagctcatctcatagaactcctctgtagcactgtggatgcctccctcatagaaatgtgc
atccaggacctcaagacccctcagcctttaccatctgctgttgaacatactcaggctcag
gcttcctttttcttggaatacctttcctctttgtcccagcttttaaagtcctgtctgttg
gtagaacctgaacttgtgacacaagatgagctcttgaaacctcttatgactaatgtcatc
cgagttctcattgtgtgcaccaaagatgtattggatgtacagttagtgttgactttttat
cgcacatggacgcatttatttgaccttctggccacactactgaggaaagctggtgctgtc
tcccttgttcctcttacctcagctcttgccaagcactgggaggcagtgactgatacactg
tgtagatgtgtgggcctctcagtccagtgccctgccctgagtattgccagcctccagttc
ctgtctgttctcttggctgaggaagaaaagaggcgtgtccagtacaaagagaaaataaat
gattgccaggccccagcagtggcctcacttcttgatggaactcagggaagccttagatct
tcagagcaacttaatgaaacaattctacagtgctatgaaggaatatcccctaaagatgtc
ctgaaaagagttgctgcaaatgccctgatgtcacttctggctgtcagcagaagagcgcag
aagcacgctttgagatctgatctcatagaaaactgtatggagcagatgaagcacatcaat
gcacaactgaacttagatttgctgaggcctgggaaagcagcactgaaaaaaaaggaggat
ggcttcattaaagagttaagcatcgctatgcagcttctaagaaactgcctttatcaaaat
gaagaatgtaaagtagcagctcttgaagcacgtcttgtacctgtactgcactctctctgg
ccttggcttttgatggaagattcattgatgcaaattgccttgcagttgctttgtgtctat
actgcaaattttccaactggctgcagttccctttgttggtcaaattatggacagtatatt
caaactgcacacagaggcacccccagtagctccctgatactgtgtatcctgaaactggct
tctcagatgcctgcagagaacaccaccattcagcagatggtttttatgtttctttcaaac
ttggccttatctcatgactgcaagggaataattcagaagagcaactttctacagcacttc
ctgtctctgacattgcctaaaggaggaaatcaacatctcagcaatgtggccattctgtgg
ttgaagttactcctgaatatgtcatttggagaagatggacagcaaatgatcctgaggctg
gatggctgcttagacttactcatagagatgagcaagtacaagcacaagagcagccctcac
atgcctctgctgatctttcataacatttgcttcagtcctgctaataagcctaaaatcctg
gctaatgtattaagcatatggatacagttggagagaagtcatttctccagctctctcact
cttgacctcaatggactttctagacacaggtcagaaaaagttgttacccttctggcttcc
tgtttagaaagtgagagtcaaaatgcccagaggattggagcagcttcactttgggctcta
acttacaattaccaaaaggcaaaagcaactttgaaaaatccatcaataaaaagaaaagta
gatgaagcgtattccatagcaaagagaactatctcaaactcagaagaagaccctctaaat
tcctactatttgaaatgccttgaaaatcttgtacaactgcttaactattcctga
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integrated database retrieval system
