Mastomys coucha (southern multimammate mouse): 116087903
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Entry
116087903 CDS
T07224
Symbol
Atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
116087903 (Atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcoc03000
]
116087903 (Atrx)
03036 Chromosome and associated proteins [BR:
mcoc03036
]
116087903 (Atrx)
Transcription factors [BR:
mcoc03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
116087903 (Atrx)
Chromosome and associated proteins [BR:
mcoc03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
116087903 (Atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
DTHCT
Motif
Other DBs
NCBI-GeneID:
116087903
NCBI-ProteinID:
XP_031222236
LinkDB
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Position
X
Genome browser
AA seq
2482 aa
AA seq
DB search
MVASTGSPPAALGVSELQSESKLNTLVQKLHDFLAHSSEESEETCSSPRLVMNQSTDKII
GSGLNSDIMENNKEEGTSTSEKSKSSGSSRSKRKPSVVTKYVESDDEKPTDENVNEKAAT
ENSENDITMQSLPKGTVIVQPEPVLNEDKDDFKGPEFRSRSKMKTENLKKRGEDGLHGIV
SCTACGQQVNHFQKDSIYRHPSLKVLICKTCFKYYMSDDISRDSDGMDEQCRWCAEGGNL
ICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICQPEPLLDLVTACNSVFENLEQ
LLQQNKKKIKVDSEKSSKVCDQTTKFSPKKNSSSCNGEEKKFEESCSGSGSVTSTYSAPA
VPKEMIKKTKKLIETTSNMNSSYIKFLKQAADNSEMTSAMKLRQLKAFKSVLADIKKAHL
ALEEDLNSEIQALHAVHKEKNTKELKFTDTKSETKMRKGERSYYPEKKEFLKLDARSSVK
VIDGEEHKAHKSTSGEHKGSSGRKDGPQYEPTNTSEDLDMDIVSVPSSVPEDIFDSLESA
MEVQSSADYQGDGNSGTEPELESSSVILNTSSKDSRGNIKSKVTAKVRKELYVKLTPVSL
SNSPIKGIDCQEVPQEENGRKSSGVSRSSEKCRPREEISDNEHSVENNVATLLEDSDLRR
SPRVKTTPLRRQTETNPAMSNSDEESNGTMKEKQKLSGPIRKKDKRNSSERAGKSHKVPK
AKQPGIGDQNSDSDEMLAVLKEASQMSHSSSSDTDINEPQTNHKSKTGKDENGKRKRKNS
TSGSDFDTEKGKSTETSIISKKKRQNYSESSNYDSELEREIKTMSRIGAARKSVSDKKEQ
DFSEDEKQSKKVVDNGGDERAKTAREGSAHERSATDNTGIAEGRQGGSRSEAECSSEKGR
SGVEFQERQKPGVSSDGAEKPSGKEGDVNSREDKRVTKTKEKTKHLRTRPGRKVKSGSSN
VAERFPKKEQSDESSDNEKRQKTPDLKGETVKREQECESSSDGTERLPEGEEISLFTKGI
KQSKNDTAGGEKKGRKWKDKSCEKKEELSDSVDRLPGKGDSCDSSEDKKTRSSVSLREKE
QFNLPRKSSGKRPECSSSDTERSLKGERCDSTEKRLKRIDLRERRNSNSKRNAKEVKRAS
SSSDAEGSSEDNKKQKKQRTSAKKKTGNTKEKKRNSLRKTPKKKQADITSSSSDIGDDDQ
NSAGEESSDEQKIKPVTENLVLPSHTGFCQSSGDEALSKSVPVTVDDDDDDNDPENRIAK
KMLLEEIKANFSSDVDGSSDDEPDGGEKKRIGKQSEETPGDDASNQVNSESDSDSEESKK
PRYRHRLLRHKLTLSDGESGEEKTANPKEHKEAKGRNRRKMSSEDSEDTDFQESGVSEEV
SESEDEQRPRTRSAKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSHSEEEKKEDDDEE
EEEEEDEEEEEEDENDDSKSPGKGRKKIRKILKDDKLRTETQNALKEEEERRKRIAERER
EREKLREVIEIEDASPTKCPITTKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMW
DCCCESVKKTKKSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTAL
NWMNEFEKWQEGLNDDEKLEVSELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQG
RNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIKSRRRIILTGTPLQ
NNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLA
GCVQRKDYTALTKFLPPKHEYVLAVRMTAIQCKLYQYYLDHLTGVGNSTEGGRGKAGAKL
FQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMDEFIASDSDETSMSLSSDEYAKKKK
TKGKKGRKDSSSSGSGSDNDVEVIKVWNSRSRGGGEGSVDDTGNNPSVSLKLDESKTTST
SNPSSPAPDWYKDFVTDTDAEVLEHSGKMVLLFEILRMAEELGDKVLVFSQSLISLDLIE
DFLELASREKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTNAQSRKKWAEEFNDETNVRGR
LFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTM
EDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDPNSEKKKKRDTPML
PKDTILAELLQIHKEHIVGYHEHDSLLDHKEEEELTEEERKAAWAEYEAEKKGLTMRFNI
PTGTNLPPVTFTSQTPYIPFNLGALSAMSNQQLEDLINQGREKVVEATNSVTAVRIQPLE
DIISTVWKENMNLSEAQVQALALSRQASQELDVKRREAIYNDVLTKQQMLISCVQRILMN
RRLQQQYSQQQQQQLTYQQATLSHLMMPKPPNLIMTPSNYQQIDMRGMYQSVAGGMQPPP
LQRAPPPPMRSKNPGPSPGKSM
NT seq
7449 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcctccactggaagtcctccggcggctctgggagtctcggagcttcagagtgaa
agcaagttgaatacattggtgcagaagcttcatgacttcttagcacattcatcagaagaa
tctgaggaaacctgttcttctccacggcttgtcatgaaccaaagcacagataaaatcatt
ggttctggacttaattctgatatcatggaaaataataaggaagagggaactagcacctca
gaaaaatccaaatcttcaggttcatcaagatcaaagaggaaaccttcagttgtgacaaaa
tatgtagaatctgatgatgaaaaacccacagatgagaatgtaaatgaaaaagctgctact
gagaattcagaaaatgacattactatgcaaagcttgccaaaaggtacagtgattgtacaa
ccagagccagtgctgaatgaagacaaagatgattttaaagggcctgaatttagaagcaga
agtaaaatgaaaactgaaaatctcaaaaaacgcggagaagatggacttcatgggatcgtg
agttgcacagcttgtggacaacaggtcaatcattttcaaaaagattccatttatagacac
ccttcactgaaagtccttatttgtaagacctgctttaagtattatatgagtgatgatatt
agccgtgactcagatggaatggatgaacaatgcagatggtgtgcagaaggtgggaacttg
atttgttgcgacttttgccataatgccttctgtaagaaatgcatcctgcgcaaccttggt
cgaaaggagttgtctacaataatggatgaaaacaatcaatggtattgctatatttgtcaa
ccagagcctctattggacttggttacagcgtgtaacagcgtatttgagaatttagaacaa
ttgttgcaacaaaataagaagaagataaaagttgacagtgaaaagagtagtaaagtctgt
gaccaaacaaccaaattttctccaaagaagaatagttccagttgtaatggagaagaaaaa
aaattcgaggagtcctgttctggttctggttctgtaacctccacttactcagcaccagcg
gtgcccaaagagatgattaagaagacgaaaaaactgattgagactacatccaacatgaac
tccagttacattaagtttctaaaacaggcagcagataattccgaaatgacttctgcaatg
aagttgcgtcaacttaaggcttttaaatccgtgttggctgatatcaagaaggctcatctt
gcattagaggaggatttgaattcagagatccaagctttgcatgctgtacacaaagaaaaa
aataccaaagagcttaaattcacagatactaagtctgaaacaaaaatgcgaaaaggggaa
agatcctattatccagaaaagaaagagtttttaaagttagatgctagatcatcagtaaag
gtcatagatggtgaagagcacaaagcacataagagtactagtggggaacataagggttct
tctggtaggaaagatggccctcagtacgaacccactaacacttctgaggatttagatatg
gatattgtgtctgttccttcctcagttccagaagacatttttgatagccttgagagtgct
atggaagttcagagttctgctgattatcaaggagacggtaacagtgggactgaaccagaa
ctggagagctcatctgtaatattaaatacttcttcaaaagacagcagaggaaatattaag
tcaaaagtcacagcgaaagtaagaaaagaattatatgttaaacttacccctgtttccctt
tctaattccccaattaaaggtattgactgtcaggaagttccacaagaggagaatggccgt
aaaagttctggggtgtcccgcagctcagagaaatgtaggcctagagaggaaattagtgat
aatgagcattcagttgaaaacaatgttgcaacacttttagaagactctgatcttcgaaga
tccccacgtgtaaaaacgacaccactgaggcgacagacagaaaccaaccctgcaatgtcc
aattcagatgaagaaagtaatggaactatgaaggagaaacaaaagctgtccggtccaata
agaaaaaaggataagcgaaactcatctgagcgtgctggtaaatctcataaggtacccaaa
gctaagcaaccagggattggggatcagaattcagattctgatgaaatgctagcagtcctc
aaagaggcaagtcagatgagtcatagttcttcctcagatactgacattaatgaaccacag
acaaaccataaaagcaaaacagggaaagatgagaatggaaaaaggaaacggaagaattct
acttctgggtcagattttgacactgaaaaaggaaaatcaactgaaacctctattatctct
aaaaagaaacgccaaaactactcagagtcctctaattatgactcagagttagaaagagag
attaaaaccatgagcagaattggggctgccagaaaaagtgtttcagataaaaaagagcaa
gacttttctgaagatgaaaaacaaagcaaaaaagtagtggataatggaggggatgagagg
gcaaagacagcacgtgaagggtcagcacatgaaaggtcggctactgacaacactggcatc
gctgaaggcaggcagggagggagtcgctccgaagcagaatgttcctctgagaaaggcagg
agtggagtggaattccaagagaggcagaagcctggtgtttcctctgatggtgctgaaaag
ccttcagggaaagagggggatgtcaattcccgtgaagacaaaagagttactaaaactaaa
gaaaaaactaaacatctaagaaccagaccaggtagaaaagtaaagagtggatcatctaat
gttgctgaaagatttccaaagaaagagcagagtgatgagtcttctgacaacgaaaagaga
cagaaaactccagacttaaaaggagaaacagtgaagagagagcaggagtgtgagtcatcc
tctgatgggactgagagattgcctgagggagaagagattagtctgttcactaaaggcata
aagcaaagtaaaaatgacacagctggaggagaaaagaaaggcagaaaatggaaagataaa
tcatgtgaaaagaaggaagaattatctgatagcgtcgatagattgccaggaaaaggagat
agttgtgactcttccgaagataagaagaccaggagttcagtgtctctgagagagaaggaa
caattcaacttgcctagaaagagttcagggaagaggccagagtgttcatcgtcggatact
gagagatccttgaaaggagagcgttgtgactccactgagaagagactgaaaagaattgac
ttgagagaaagaagaaactccaattcaaagagaaatgccaaggaagtaaagcgtgcttca
tcatcatctgatgctgagggaagctcagaagataataaaaagcagaagaaacaaagaact
tcagccaaaaagaagacaggcaataccaaggagaaaaaaagaaactccttaagaaaaaca
cctaaaaagaagcaagcagacattacttcttcatcttctgatataggagatgatgatcag
aattctgcaggcgaggaaagcagcgatgaacagaaaatcaagcccgtgactgagaatcta
gtgctgccttcacacacgggattttgtcagtcttcaggagatgaagccttatctaaatca
gtgcctgtcacagtggatgatgatgacgacgacaatgatcctgagaatagaattgccaag
aagatgcttttagaagaaattaaagccaatttttcctctgatgtggatggatcttcagat
gatgaacctgatggaggagagaaaaaaagaattggaaaacagagtgaggaaacaccaggc
gatgatgcctcgaatcaagtcaattctgaatcagattcagattctgaagaatctaagaag
ccaagatatagacatagacttttgaggcataaactgactctgagtgatggagaatctgga
gaagagaaaacagcaaatcctaaagagcataaggaagccaaaggaagaaatagaaggaag
atgagcagtgaggattcagaagacactgactttcaggagtcaggagttagtgaggaagtc
agtgaatctgaggatgaacagcggcctagaacacggtctgcaaagaaagcagaattggaa
gaaaatcagcggagttataaacaaaagaagaaaagacggcgcattaaggttcaagaggat
tcctccagtgaaaacaagagccattctgaggaagaaaaaaaggaagatgatgacgaggag
gaggaggaggaggaagacgaggaggaggaggaggaagatgaaaatgatgattctaagtca
cctggaaaaggcagaaagaaaattcggaagattcttaaagatgataaactaagaacagaa
acacagaatgcccttaaagaagaggaagagaggcgaaaacgtattgcagagagggaacgt
gaaagagagaaattaagagaggtgatagaaattgaggatgcttcacctactaagtgtcca
ataacaaccaaattggttttagatgaagatgaagaaaccaaagaaccgttagtacaggtt
catagaaacatggttataaaattgaaaccccatcaagtagatggtgttcagtttatgtgg
gattgctgctgtgagtctgtgaaaaagacaaagaaatctccaggttcaggatgtattctt
gcccactgtatgggccttggtaagaccctccaggtggtcagttttcttcacacagttctt
ttgtgtgacaaattggatttcagtacagctttagtggtttgtcctcttaacactgctttg
aattggatgaatgaatttgagaagtggcaggaaggattaaatgatgatgaaaagcttgag
gtctctgaattagcaactgtgaaacgtccccaggagagaagttatatgcttcagagatgg
caagaagatggtggtgttatgatcatagggtatgaaatgtacagaaatcttgctcaagga
aggaatgtgaagagtcggaaacttaaagaaatatttaataaagctttagtagacccaggc
cctgattttgttgtttgtgatgaaggccatattctaaaaaatgaagcatctgctgtttca
aaagctatgaactctataaaatcgaggaggaggattattttaacaggaacaccacttcaa
aataacctaattgagtatcattgcatggttaactttatcaaggaaaatttgcttggatcc
atcaaggaattcaggaatagatttataaatccaatccaaaacgggcagtgtgcagattct
accatggtagatgtgagagtgatgaaaaaacgtgctcatattctctatgagatgttagcc
ggatgtgttcagaggaaagattacacagcgttaacaaagttcttgcctccaaaacatgag
tatgtgttagctgtgagaatgactgctattcagtgcaagctctatcagtactacttagat
cacttaacaggtgtaggcaatagtactgaaggtggaagaggaaaggcaggtgcaaagctc
ttccaagatttccagatgttaagtagaatctggactcatccttggtgtttacaactggac
tatattagcaaagaaaataaggggtattttgatgaagatagtatggatgaatttatagct
tcagattctgatgaaacctctatgagtttaagctcagatgagtatgcaaagaagaagaaa
acaaaggggaagaagggcaggaaggacagcagctcaagtggaagtggcagtgataacgat
gttgaagtcatcaaagtctggaattcaagatctagaggaggtggagaaggcagtgtggat
gacacaggaaacaacccttcagtttctctgaagctagatgaaagtaaaactacttccact
tctaacccaagtagcccagctccagattggtacaaagattttgttacagatactgatgct
gaggttttagaacattctggaaaaatggtacttctttttgaaattcttcgaatggcagaa
gaacttggggataaagttcttgttttcagccagtcgctcatatctctggacttgatcgaa
gattttcttgagttggctagtagggagaaaacagaagataaagataaacctcttatttat
aaaggtgaaggaaagtggctccgaaatattgactattaccgcctggatggctctactaat
gcacagtcaaggaagaagtgggctgaagaatttaatgatgaaaccaatgtgagagggcga
ttgtttatcatttctactaaagcaggatctcttggaattaacctggtagctgctaataga
gtgattatatttgatgcttcttggaatccatcttatgacatccaaagtatattcagagtt
tatcgctttggacaaactaagcctgtttatgtatataggttcttagctcagggaaccatg
gaagataagatttacgatcgtcaggtaacaaagcagtcactatctttccgagttgttgat
caacagcaggttgagcgtcattttaccatgaatgagcttactgaactttatacttttgag
ccagacttattagatgaccctaattcagaaaagaagaagaaaagggatacccccatgctg
ccgaaggacaccatacttgcagaacttcttcagatacataaggagcacattgtaggatat
catgaacatgattctcttttggaccacaaagaagaagaagagctgactgaagaagaaaga
aaagcagcttgggctgaatatgaagccgaaaagaagggactgaccatgcgtttcaacata
ccgactgggaccaatttaccccctgtcactttcacctctcaaactccttatattcctttc
aatttgggagccctgtccgcaatgagtaaccagcagctggaggaccttattaatcaagga
agagaaaaggttgtagaagcaacaaacagtgtgacagcagtgaggattcagcctcttgaa
gacatcatttcaactgtatggaaagaaaacatgaatctctccgaggcccaagtacaagca
ctagcattaagtagacaagccagccaggagcttgatgtgaaacgaagagaagcaatctac
aatgatgtattgacaaagcaacagatgttgatcagctgtgttcagcgaatacttatgaac
agacggctccagcagcagtacagtcagcagcaacagcaacagttgacttatcagcaagca
acactgagtcacctcatgatgccaaagcctccaaatttaatcatgactccttctaactac
cagcagattgatatgagaggaatgtatcagtcagtggctggtggtatgcagccaccaccc
ttacagcgagcaccgccgcccccaatgagaagcaaaaatccaggaccttccccagggaaa
tcaatgtga
DBGET
integrated database retrieval system
