Mastomys coucha (southern multimammate mouse): 116088071
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Entry
116088071 CDS
T07224
Symbol
Rad54b
Name
(RefSeq) DNA repair and recombination protein RAD54B isoform X1
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116088071 (Rad54b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcoc03400
]
116088071 (Rad54b)
DNA repair and recombination proteins [BR:
mcoc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
116088071 (Rad54b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
116088071
NCBI-ProteinID:
XP_031222458
LinkDB
All DBs
Position
Unknown
AA seq
913 aa
AA seq
DB search
MPRPPRLPLAGEQQVSAKRLALLKMRRSAAPSQMQGNSFKKTRFIPPGRSNTGVSKEVTK
MSPNTKLFQGAEQSQSDPDVCSSNPCPTEGSPRELGDGARVDPLLPVHSASKEIVESKAQ
EEAASRLLKYFSVVWCKASKKKHKKWEGDAILIVKGRSFTLKDLEGKDIGKGIGYKFKEL
ENVEEGQTLMIGGKEIEILGTVSPDDFNSGKCFQCGSGSPSVPSSQAARRCSSTPFKSVC
QSTQAKGNRWNDWQNCKPRHDPDTPNALVMPRPDKNHQWMFNRHCFPIVDVVIDPHLVRH
LRPHQKDGIVFLYECVMGMRAIGKCGAILADEMGLGKTLQCISLIWTLKCQGPYGGKPVI
NKTLIVTPGSLVNNWRKEFQKWLGSERIKIFTVDQDHKVKEFINSTFHSVLIISYEMLLR
SLDQIKTIPFGLLICDEGHRLKNSSIKTTAALSSLSCEKRVILTGTPVQNDLQEFFALVD
FVNPGILGSLSSYRKIYEEPIIMSREPSSPEEEKELGERRASELTRLTGRFILRRTQEVI
NKYLPPKIENVVFCRPGALQIALYRKLLSSQSVRSCLQGLLENSDHLVCIGALKKLCNHP
CLLFSSVKGKEFSSSCDENEERNLCQGLLTVFPAGYNSLQFSENESGKLQVLVKLLAVIH
ELRPTEKVILVSNYRQTLNVLEEVCKRHGYACGRLDGQTPVSQRQQIVDSFNSKYSTNFI
FLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIE
EKIYQRQISKQGLSGAVVDLTRSSEHIQFSVEELKNLFTLHENSHCVTHDLLDCECTGQK
GHTDDVSESPAASRQCQLGPQKSDSSRPLSMSQLKQWKHFSGDHLNLPDPFLERIRQNVS
FFFQNITNQGSAI
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgccgcggcccccgaggctgcccctggccggagaacagcaggtgtcagccaagaggtta
gcattgctaaagatgagacggtctgcagcaccaagtcagatgcagggaaattcctttaaa
aaaacaagattcatacctccaggaagaagtaatacaggtgtgagtaaggaggttacaaag
atgagtccaaatacaaaactgtttcagggtgctgaacagtcacagagtgatccagatgta
tgcagttcaaatccctgtcccactgagggaagccctagggaattaggtgatggggctaga
gtagatccacttcttccagttcattcggcctctaaagaaattgtagagtccaaggcacaa
gaagaagcagctagcagattgcttaaatatttcagtgttgtttggtgtaaagcgtcaaag
aaaaaacacaaaaaatgggaaggcgatgctattcttattgtaaaaggaaggtctttcaca
ttgaaagatttggaaggaaaagatattggaaaaggcattggatataaattcaaggagctt
gaaaacgtagaagaaggccaaacattgatgattggtgggaaagaaatagaaatcctgggt
acagtctctcctgatgacttcaacagtggcaagtgttttcagtgtggaagtggaagtcct
tctgtcccaagttctcaggctgccaggagatgctcttctacccctttcaaaagtgtgtgt
cagtcaacccaagcaaagggaaacagatggaatgactggcaaaactgcaaaccacgtcat
gacccggacacaccaaatgcccttgttatgcctcgaccagacaagaatcaccaatggatg
tttaataggcactgctttcccattgtggatgtggtgatagaccctcaccttgtacgccac
ctccgaccacatcagaaagatggaattgtcttcctctatgagtgtgtgatgggaatgaga
gcaattggcaaatgtggtgctattcttgctgatgaaatgggcttaggaaaaacattgcag
tgtatctcgctcatctggaccctaaagtgtcaggggccctatggtggcaagccagtgata
aataagacacttattgttactcctggaagcctggtgaataattggaggaaagaatttcaa
aaatggctgggaagcgaaaggatcaagatattcactgttgatcaggaccataaagtcaag
gagtttatcaattctacatttcattctgttcttatcatcagttatgaaatgttgcttcgt
tccctagatcaaattaagactataccatttggccttctgatctgtgatgaggggcaccgg
ttgaagaacagtagtatcaagacaacggcagccctttctagcctctcttgtgagaagaga
gtaattctcactggtactccagttcagaatgatttgcaagagttctttgcattagttgat
tttgttaatccaggaatattagggtctctgtcatcttataggaagatatatgaagaaccc
atcattatgtcaagagagccttcttctcctgaggaagagaaagagttaggggagagaaga
gcaagtgaactcacgcgtctcactggacgttttatccttagaagaactcaggaagtcatc
aataaatacctgccccctaagatagagaacgtagtcttttgccgaccaggagcattgcag
attgcactttaccgaaagctgctgagttctcagtctgtgaggtcctgtctgcaaggacta
ttggaaaatagtgatcacctcgtctgcataggagccctaaagaagctgtgcaaccaccca
tgcctcttgttcagctctgtgaagggtaaagaatttagctcgagttgtgatgaaaatgaa
gaaaggaatctatgccaaggcttgctgactgtgttccctgctggctacaactctctgcag
ttctctgagaatgaatcaggaaaactacaggtgttagtaaagctcctggcagtgatccat
gaacttcgtcccactgaaaaagtgattttggtatccaactacagacaaaccttgaatgtt
ttagaagaagtatgcaagcgtcatggatatgcttgtggaagacttgatggccaaacacca
gtctctcaaaggcagcaaattgttgacagtttcaatagtaaatactctactaattttatt
tttttattaagttcaaaagctggtggtgtgggacttaatcttattggaggatctcactta
attctctatgatatcgattggaacccagccactgacatccaggctatgtctagagtatgg
agagatggtcagaaacatcctgtacatatttatagactcctgactacaggtacgatagag
gaaaagatctatcagaggcagatcagtaagcaaggcctttctggggcagttgtagaccta
accagatcatctgaacatatccaattttctgtggaagagcttaaaaacttgttcacacta
catgaaaattcacattgtgttactcatgacctgcttgactgtgagtgcacagggcaaaaa
ggtcacactgatgatgtgtcagaaagccctgccgcctctagacagtgtcagctcggccct
cagaagtctgactcctcgagacctctgtccatgtcacagttgaagcagtggaaacacttt
tctggagaccatttaaatcttccagacccatttctcgaaagaataaggcaaaatgtgtcg
ttctttttccagaatataaccaaccaaggttctgccatttaa
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