Mastomys coucha (southern multimammate mouse): 116088093
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Entry
116088093 CDS
T07224
Symbol
Chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcoc03036
]
116088093 (Chd7)
Chromosome and associated proteins [BR:
mcoc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116088093 (Chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
CHDCT2
HDA2-3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
116088093
NCBI-ProteinID:
XP_031222526
LinkDB
All DBs
Position
Unknown
AA seq
2988 aa
AA seq
DB search
MADPGMMSLFGEDGNLFSEGLEGLGECGYPENPVNPMGQQMPIDQGFPSLQPSLHHPSPN
QNQTKLTHFDHYNQYEQKMHLMDQPNRMMGSAPGNGLASPHSQYHTPPVPQVPHGGSGGG
QMGVYPGMQNERHGQSFVDGGSMWGPRAVQVPDQIRAPYQQQQPPQPAPSGPPAQGHPQH
MQQMGSYMARGDFSMQQHGQPQQRMSQFSQGQEGLSQGSPFIATSGPGHLSHMPQQSPSM
APSLRHPVQQQFHHHPAALHGESVAHSPRFSPNPPQQGAVRPQTLNFSSRNQTVPSPTVN
NSGQYSRYPYSNLNQGLVNSTGMNQNLGLTNSTPMNQSVPRYPNAVGFPSNSGQGLMHQQ
PIHSSGSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVRPGSAGMPMEVG
SYPNMPHPQPSHQPPGAMGIGQRNMGPRNMQQPRSFMGMSSAPRELTGHMRPNGCPGVGL
ADPQAIQERLIPGQQHPGQQPSFQQLPTCPPLQPHPGLHQSSPPHPHHQPWAQLHPSPQN
TPQKVPVHQHSPSEPFLEKPVPDMTQVSGQNAQLVKSDDYLPSIEQQPQQKKKKKKNNHI
AAGDPSKGFGKDDFPGGVDNQELSRNSLDVSQEEKKKKKRLKVKKDPKELKELKEKKEPK
TPKAPKIPKEPKEKKAKTVTPKPKSSKKSSNKKPDSDTSALKKKVNKGKTEGSENSDLDK
TPPPSPAPEEDEDPGVQKRRSSRQVKRKRYTEDLEFKISDEEADDADAAGRDSPSNTSQS
EQQESVDAEGPVVEKIMSSRLVKKQKESGEEVEVEEFYVKYKNFSYLHCQWASVEDLEKD
KRIQQKIKRFKSKQGQSKFLSEIEDDLFNPDYVEVDRIMDFAHSTDDRGEPVIHYLVKWC
SLPYEDSTWELKQDIDQAKIEEFEKLMSREPETERVERPPPDDWKKSESSREYKNNNKLR
EYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIP
NWEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFEMILT
DCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLH
FLEPSRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVE
LTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEF
KETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQR
RYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWN
PQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENAT
NGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHTITIESEGKGSTF
AKASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRVRKQTRLYSAVK
EDELMEFSDLESDSEEKPCAKPRRPQDKSQGYARSECFRVEKNLLVYGWGRWTDILSHGR
YKRQLTEQDVETICRAVLVYCLNHYRGDENIKSFIWDLITPTADGQTRALLNHSGLSAPV
PRGRKGKKVKAQSTQPVVQDADWLASCNPDALFQEDSYKKHLKHHCNKVLLRVRMLYYLR
QEVIGDQAEKILEGADSSEADVWIPEPFHAEVPADWWDTEADKSLLIGVFKHGYEKYNSM
RADPALCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDREDEDPEYKPTRAPFKDDID
EFANSPPEDKEDSLEVHSTGKHSESNAELGQLYWPNTSTLTTRLRRLITAYQRSYKRQQM
RQEALMKTDRRRRRPREEVRALEAEREAIISEKRQKWTRREEADFYRVVSTFGVIFDPVK
QQFDWNQFRAFARLDKKSDESLEKYFSCFVAMCRRVCRMPAKPEDEPPDLASLIEPITEE
RASRTLYRIELLRKIREQVLHHPQLSDRLKLCQPSLDLPEWWECGRHDRDLLVGAAKHGV
SRTDYHILNDPELSFLDAHKSFAQNRGASTVPSLNTLAMGFGQTPPVISSAHAHEEKVME
PAEGKAEECERSPAKERSDGKEEEEEASGAKDGKQECEAEASSVKGELKGVEGSGDPGSK
SASEKGSEEDEEEKLEDDDKSEESSQPEAGAVSRGKTFDEESNASMSTARDETRDGFYIE
DGDPSVAQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGKWPVNRRQMFDFQGLVPGYP
PSTVDSPLQKRSFAELSMVSQASISASEDIATPSPQLSKDDALNLSVPRQRRRRRRKVEI
EAERAAKRRNLMEMVAQLRESQVVSENGQEKVVDLSKASREATSSTSNFSSLTSKFILPN
VSTPVSDAFKTQMELLQAGLSRTPTRHMLNGSLVDGEPPVKRRRGRRKNVEGLDLLFMSH
KRTPLSAEDAEVTKAFEEDIETPPIRNIPSPGQLDPDTRIPVINLEDGTRLVGEDAPKNK
DLVDWLKLHPTYTVDMPSYVPKNADVLFSSFQKPKQKRHRCRNPNKLDINTLTGEERVPV
VNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTDIVKQSGFVPESMFDRLLTGPVV
RGEGASRRGRRPKSEIARAAAAAAAVASTSGINPLLVNSLFAGMDLTSLQNLQNLQSLQL
AGLMGFPPGLATAATAGGDAKSPAAVLPLMLPGMAGLPNVFGLGGLLNNPLSAATGNTTT
VSSQGEPEDGTSKVEEKGNDNEDENRDSEKSTDAVSAADSANGSVGAATAPAALPSNPLA
FNPFLLSTMAPGLFYPSMFLPPGLGGLTLPGFPALAGLQNAVGASEEKAADKAEGGPCKD
GETLEGSDAEENLDKTVESSILEDEVAQGEELDSLEGGDEIENNGNDE
NT seq
8967 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccaggaatgatgagtctttttggcgaggatgggaatctattcagcgaaggt
cttgaaggcctcggggaatgtggctaccctgaaaacccagtgaaccccatgggtcaacag
atgcccatagaccaaggttttccctccttacagccatccctccatcatccttcccctaat
cagaatcaaaccaagttgacccatttcgatcactataatcagtatgaacaaaagatgcat
ctgatggatcagcctaaccgaatgatgggcagcgcccctgggaatggattggcatctccg
cactcacagtatcatactcctcccgttccccaggtgccccacggaggcagtggtggcggt
cagatgggagtctatcctggcatgcagaacgaaaggcatgggcaatcttttgtggatggc
ggctccatgtggggcccccgggccgttcaggtaccagaccagatacgagccccctaccag
caacagcagccgccacagccagctccgtcaggccccccggcacagggccacccccagcac
atgcagcagatgggcagctatatggcacgtggggatttctccatgcagcagcatggccag
ccacagcagaggatgagccagttttcccaaggccaagagggcctcagtcaggggagccct
ttcatcgccacctcaggacccggccacctgtcgcacatgccccagcagagccccagcatg
gccccctccctgcgccacccagtgcagcagcaattccaccatcaccctgctgctctccac
ggagaatccgttgcccacagtcccagattctcccccaaccctcctcaacaaggggctgtc
aggccacaaacccttaactttagttctcggaaccagacagtcccctcccctactgtaaac
aactcagggcagtattctcgatatccttacagtaacctaaatcagggattagttaacagt
acagggatgaatcaaaatttaggccttacaaacagtactccaatgaatcagtccgtacca
agataccctaatgctgtaggattcccgtcaaacagtggtcagggactcatgcaccagcag
cccatccactccagtggctcactgaaccaaatgaacacacaaactatgcacccttcgcag
cctcagggaacttacgcctctccacctcccatgtcacccatgaaagcaatgagtaaccca
gcaggcacgcctcctccgcaagtcaggcccggaagtgctgggatgccaatggaagttggc
agttatccaaatatgccccaccctcagccatctcaccagccccctggtgccatgggaatt
ggacagaggaatatgggccccagaaacatgcagcagcctcgttcattcatgggcatgtct
tcggcacccagggagctgaccggacacatgagaccaaatggttgtcctggtgttggtctt
gcggatccacaagcaatccaggaacgactgatacctggccaacagcaccctggtcagcag
ccatctttccagcagttgccaacctgtcctccactgcagccccacccaggcctgcatcag
tcttcacctccacacccccatcaccagccttgggcacaactccacccgtcaccccagaat
accccgcagaaagtgcctgtgcatcagcattctccgtcggagccctttctagagaagcca
gtgccggatatgactcaggtcagcggacagaacgctcagctagtgaagagcgatgattac
ctgccgtcgatagagcagcagccacagcagaaaaagaagaaaaagaaaaacaaccacatt
gctgcaggggatcccagtaaaggttttggtaaagatgacttccctggtggggttgataac
caagaactgagtaggaactcactggatgtgtcccaggaagaaaaaaagaaaaagaaaagg
ctgaaggtcaaaaaagatccgaaggaattgaaggagctgaaggagaagaaagagcccaag
accccaaaagccccgaagatccccaaagagccaaaggaaaagaaagcaaaaactgtcacg
ccaaaacccaaatccagcaaaaagtcaagtaataagaaaccggattcagacacaagtgct
ttgaagaaaaaggtcaacaaaggaaaaacagaaggttctgagaattcagacttggacaaa
acacccccaccatcccctgcccctgaagaggacgaagacccaggtgtccagaagaggcgg
tccagcaggcaggtgaagaggaagcgatacactgaagatttggagttcaagatttctgat
gaggaggcagatgatgcagatgctgctgggagagactccccatccaacacctcgcagtca
gagcagcaggaatctgttgatgcagaaggcccagtggtggagaagattatgagcagtcgc
ctagtgaaaaagcagaaggaatctggtgaggaggtagaagttgaggaattttatgtgaag
tacaaaaacttctcctatcttcattgtcagtgggcatcagtagaagatctggaaaaagac
aagagaattcagcaaaagataaaacggtttaagtcaaaacagggccagagcaaattcctt
tcagagattgaggatgatctttttaatccagattatgtggaagttgaccggataatggac
tttgcacatagcacagatgaccggggcgagcctgtgattcactatctggtgaagtggtgc
tcactcccttacgaagacagcacatgggagctgaagcaggacatagatcaagcaaagatc
gaagagtttgaaaaactcatgtccagggagccagaaaccgagcgtgtggagcgacctcct
cctgatgactggaagaaatcggagagttccagggagtataaaaacaataacaaactcagg
gaataccagttggagggagtaaactggctacttttcaattggtacaacatgcgaaactgc
attttagcagatgaaatgggtttgggaaaaaccatccagtccattacgtttctctatgag
atatatttgaaaggaatccatggcccttttttagtaattgccccattgtccacgatcccc
aactgggaaagggaattccgaacctggacggagttgaacgtggttgtgtaccatgggagc
caagctagtcgtcggaccattcagttgtatgaaatgtacttcaaagatccccagggtcga
gtgataaaggggtcctataagtttcacgccatcatcactacgtttgagatgattctgacg
gactgtcctgagctgcgtaatattccctggcgctgtgtggtcatcgacgaagcccacagg
ctgaagaacaggaactgcaagctactggaaggactgaagatgatggacttggaacacaaa
gtgctgctgactgggaccccgctgcagaacactgtggaagagctcttcagcctgcttcat
ttcttggagccaagtcgcttcccttcagaaacaacctttatgcaagaatttggtgatctg
aaaacggaagagcaggtgcaaaaactacaggctattctaaagccaatgatgttgagacgc
ctgaaagaggatgtagaaaagaacttggcccccaaagaagagactattattgaagttgag
ctaacaaacattcagaagaaatattaccgagccatccttgagaagaattttacatttctt
tccaaaggtggtggacaagctaacgtacctaaccttttaaacactatgatggaactgaga
aaatgctgcaatcatccctacctaatcaatggtgctgaagagaaaattttggaagagttt
aaagaaacacacaatgcagagtctccagattttcagctccaggcaatgatccaggctgct
ggcaagctggtgctgattgacaagctgctgccaaagctgaaggctggtggccacagggtg
ctgatcttttcccagatggtgcgctgcttggacatcctggaagactatctcattcagaga
cggtacccatatgaaaggattgatggccgagtcagaggcaacctccgccaggcagctatt
gacagattctccaaacctgattccgataggtttgtgttcctcctgtgcacacgggcagga
gggctaggcattaatctcactgctgctgatacctgcatcatctttgattcagactggaat
ccacagaatgacctccaggctcaagctagatgccacagaatagggcagagcaaatctgtg
aaaatctacaggctgattacaaggaactcctacgaaagggaaatgtttgacaaggctagt
ctgaagctgggtttggataaagccgtgttgcagtccatgagtggaagagaaaatgccacc
aacggggtacaacaactctccaagaaggaaatagaagacctcttacgaaagggggcttat
ggtgcacttatggatgaagaagatgaagggtctaagttttgtgaagaagatattgaccag
attctccttcgacgaacccacactattaccattgagtcagaaggaaaaggttccacgttt
gctaaggccagttttgttgcgtctggaaataggacagatatttctttggatgacccaaat
ttctggcagaagtgggctaagaaggccgaattggacatcgatgcattaaacgggaggaac
aacctggttattgacactccgagagtgaggaagcagacccggctatacagcgcagtgaag
gaagacgagctgatggagttctctgacctggaaagcgactctgaagaaaagccttgtgca
aagccacggcgcccccaggataagtctcagggctatgcccggagcgagtgcttcagggtg
gagaagaatctcctggtttacggctggggccgctggacagatatcctgtcccatggacgc
tacaaacgtcagctgactgaacaagatgtagagaccatctgcagagccgtcctggtgtat
tgtctcaatcactacagaggggacgagaacatcaagagctttatctgggacctgatcacg
cccacggcggatggccagactagggccctgctcaaccattccggtctgtcggcccccgtg
ccgaggggccggaaggggaagaaggtgaaggcccagagcacgcagccggtagtgcaggat
gctgactggctggcaagctgcaacccagatgccctgttccaggaggacagctacaagaag
cacctgaaacaccactgcaacaaggtcctgctgcgtgtccgcatgctgtactacctaaga
caagaagtgataggagaccaggcagagaagatcctcgagggcgctgactcaagtgaagca
gacgtgtggatccctgagccattccatgctgaagttcctgcagattggtgggatacggaa
gcagacaaatccctcttaattggagtgtttaaacatggctatgagaagtacaattccatg
cgagccgaccctgccctgtgcttcctggaacgagtcggtatgcccgatgccaaggccatc
gctgctgagcaaagagggacagacatgctagcagatggtggtgacggtggagaatttgat
agagaagatgaagatccagaatataaaccaacgagagcaccattcaaagatgacatagat
gaatttgcaaattctcccccagaggataaggaagactctctggaggtgcacagcacaggc
aagcacagcgagagcaatgctgagttaggtcaactctactggccgaacacgtcaacccta
actacgcgtctgcgccggctcattactgcctatcagcgcagctataaaaggcaacaaatg
aggcaagaggccctaatgaagacggaccggcgcagacggaggccccgggaggaagtgaga
gcactggaggcggaaagggaagctattatatctgagaaaaggcaaaagtggacaagaaga
gaagaagcggatttttaccgggtggtgtccacctttggggttatttttgaccctgtgaaa
cagcagtttgattggaaccaattccgagcctttgccagactagacaaaaagtctgatgag
agtctggagaagtattttagctgctttgtggccatgtgcaggcgggtgtgtcgaatgcct
gccaagcccgaggatgagccgcctgacctcgcctcccttatcgagcccatcacagaggaa
cgggcatccaggacactgtaccgcattgaactgcttcgcaagatccgagagcaggtcctc
catcatccacagctgagtgacaggctgaagctctgccagcccagcctagacctgcctgag
tggtgggagtgtggacggcatgacagggacctgctggtgggtgctgctaagcacggcgtc
agccggacagactaccatatcctcaacgaccctgagttgtccttcttagatgcacacaaa
agctttgctcagaaccgtggggctagtactgtcccttctttgaatactctggccatgggc
tttggccagactcctccagtcatttcctctgctcatgctcatgaagaaaaggtaatggag
ccggctgaaggtaaggcagaggagtgtgaacgctcaccggccaaagagaggtcggatggg
aaagaggaggaagaagaagccagcggggccaaggacggcaagcaggaatgtgaggccgag
gccagctctgtgaagggcgaactcaaaggggtggagggcagtggagaccctgggtccaag
tctgcctcagagaaaggctcagaagaggatgaagaggaaaagctggaggatgatgataag
tccgaggagtcgtcgcagccagaagcaggagctgtctctagagggaagactttcgatgaa
gaaagcaatgcttctatgagcactgctagggatgaaacccgagatggattctacatagag
gatggagatccttcggtggctcagctccttcacgagagaacatttgccttctccttttgg
cccaaggacagagtaatgataaaccgattagacaacatctgtgaagctgtactgaaaggc
aaatggccagtaaatcgacgccagatgtttgacttccagggcctcgtccctggttatccg
ccctccaccgtggacagtcccctgcagaagaggagctttgctgagctctccatggtcagc
caggccagcatcagtgcaagcgaggacatcgccaccccatctcctcagctgtccaaggat
gatgccctcaacctgtctgtccctcgccagcggcggcggaggaggaggaaagttgaaatc
gaggctgaaagagctgccaagaggcgaaaccttatggagatggtcgctcagcttcgagag
tctcaggtggtctcagaaaatggacaagaaaaagttgtggacttatcaaaggcctcgaga
gaggcaacaagctctacctcaaatttttcatctcttacttcaaagtttatcttgcctaat
gtctccacaccagtgtctgatgcctttaagactcaaatggagctgctccaagcaggcctt
tcacgcacacctacaaggcacatgctcaatggctccctggtggatggcgagccccccgtg
aagaggaggcgaggcaggaggaaaaacgtggagggcctcgacctacttttcatgagccac
aaacggacgccgttaagtgcagaggatgctgaggtgaccaaagcttttgaagaagatata
gagaccccaccaataagaaacattccttctcctggacagttggaccccgacacccggatc
cctgtgataaaccttgaagatgggactaggctggtgggagaagatgctcctaaaaacaag
gacttggttgactggctgaagctgcaccccacctacactgtcgatatgccgagttatgta
ccaaagaatgcagatgtgctgttttcctcgtttcagaaaccgaaacaaaaacgacataga
tgtcgaaatcctaataaattggatataaacactttgacaggagaagaaagggttcctgtt
gttaacaaacgaaatgggaagaagatgggtggagccatggcccctccgatgaaggacctg
cccaggtggctggaggagaaccctgagtttgcagttgctccagactggaccgatatagtc
aagcagtctggatttgttcccgagtcaatgtttgaccggctcctcactgggcctgtggtg
cgaggagaaggagccagcaggagaggacgaaggcccaagagtgagatcgcccgagcagcc
gcagcggctgctgctgtcgcctctacttcagggatcaaccctctgttggtgaacagcctg
tttgctgggatggacctgacaagcctgcagaatctccagaacctccagtctctccagctg
gcagggctcatgggcttccctccaggactggccacagctgccaccgccggaggcgatgcg
aagagccccgctgcagtgctgcccctgatgctgccagggatggcgggcctgcccaacgtg
ttcggcctgggcgggctgctgaacaaccctctctcagctgctactggaaacaccactact
gtttcgagtcaaggagagccagaggacggcacttcaaaagtggaagagaaaggaaacgac
aatgaagatgagaaccgagactctgagaaaagcacagacgccgtttcggctgctgactct
gcgaacggatctgttggtgctgctactgccccggctgcattgccctccaacccgctggcc
ttcaaccctttcctcctgtccaccatggccccaggcctcttctacccatctatgtttcta
cctccaggactggggggattgacactgcctggcttcccagcactggcgggactccaaaac
gccgtgggtgccagcgaagaaaaggctgctgacaaggccgagggaggcccctgtaaagac
ggagagaccctggaaggcagcgatgctgaggagaacctggacaagactgtagagtcctcc
atcttggaagacgaggttgcacagggtgaagagctggactccctcgaaggcggggatgag
atagaaaacaacggaaatgacgagtaa
DBGET
integrated database retrieval system
