KEGG   Mastomys coucha (southern multimammate mouse): 116088128
Entry
116088128         CDS       T07224                                 
Symbol
Sox17
Name
(RefSeq) transcription factor SOX-17
  KO
K04495  transcription factor SOX17 (SOX group F)
Organism
mcoc  Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04310  Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:mcoc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    116088128 (Sox17)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mcoc03000]
    116088128 (Sox17)
Transcription factors [BR:mcoc03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    116088128 (Sox17)
SSDB
Motif
Pfam: HMG_box Sox17_18_mid HMG_box_2 HMG_WDHD1 HTH_24
Other DBs
NCBI-GeneID: 116088128
NCBI-ProteinID: XP_031222602
LinkDB
Position
Unknown
AA seq 422 aa
MSSPDAGYASDDQSQPRSAQPAVMAGLGPCPWAESLSPLGDVKVKGEVVASSGAPAGTSG
RAKTESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEE
AERLRVQHMQDHPNYKYRPRRRKQVKRMKRVEGGFLHALAEPQAGALGPEGGRVAMDGLG
LPFPEPGYPAGPPLMSPHMGAHYRDCQGLGAPALDGYPLPTPDTSPLDGVEQDPAFFAAP
LPGDCSAAGAYTYAPVSDYAVPSEPPAGPMRVGPDPSGPAMPGILAPPSALHLYYGAMGS
PAASAGRGFHAQPQQPLQPQAPPPPPPPPQQQQHPHGPGQPSPPPEALPCRDGTEPNQPT
ELLGDVDRTEFEQYLHFVYKPEMGLPYQGHDCGVNLSDSHGAISSVVSDASSAVYYCNYP
DI
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgagcagcccggatgcgggatacgccagtgacgaccagagccagccccggagcgcgcag
cccgcggtgatggccgggttgggcccctgtccctgggccgagtccctgagccccctcggg
gatgtaaaggtgaaaggcgaggtggtggcgagtagcggagcgccagccgggacctcgggc
cgagccaaaactgaatctcgcatccggcggccgatgaacgcctttatggtgtgggccaaa
gacgaacgcaagcggctggcacagcagaacccggatctgcacaacgcagagctgagcaag
atgctaggcaaatcctggaaggcgttgaccttggcagagaagcggcccttcgtggaagag
gccgagcggctgcgcgtgcagcacatgcaggaccaccccaactacaagtatcggccgcgg
cggcgcaagcaggtgaagcgcatgaagcgggtggagggaggcttcctacacgctctcgcc
gagcctcaggccggcgcgcttggtccggagggcggccgcgtggccatggatggcctgggt
ctgcctttcccggagccgggctatccggccgggccgccgctgatgtctccgcacatgggc
gcccactaccgcgactgccagggactgggcgcgcccgcgctcgacggctaccctctgccc
accccggacacatccccgctggatggcgtggagcaggacccggctttctttgcagccccg
ctgccaggggactgctcggcggccggcgcctacacttacgctcctgtctcggactacgct
gttccctcagagccgcccgctggccccatgcgagtggggccggatccctcgggccctgcg
atgccggggatactggcgccccccagcgctctgcacctgtattacggcgcgatgggctcg
cccgccgcaagcgcagggcgcggtttccacgctcaaccccagcagccgctgcaaccgcaa
gcaccgccgccgccgccgccgccaccgcagcagcagcagcacccgcacggcccggggcag
ccttcgccccctcccgaggctctgccctgccgggatggcacggaacccaaccagcccact
gagctcctaggggacgtggatcgcacggaattcgaacagtatctgcactttgtgtataag
cccgagatgggtcttccctaccagggacacgactgtggagtgaacctctcagacagccac
ggagccatttcctccgtggtgtccgacgctagctcagcggtctactactgcaactaccct
gacatttga

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