Mastomys coucha (southern multimammate mouse): 116088152
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Entry
116088152 CDS
T07224
Symbol
Vcpip1
Name
(RefSeq) deubiquitinating protein VCIP135
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mcoc01002
]
116088152 (Vcpip1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcoc04121
]
116088152 (Vcpip1)
Enzymes [BR:
mcoc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116088152 (Vcpip1)
Peptidases and inhibitors [BR:
mcoc01002
]
Cysteine peptidases
Family C64
116088152 (Vcpip1)
Ubiquitin system [BR:
mcoc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
116088152 (Vcpip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
Motif
Other DBs
NCBI-GeneID:
116088152
NCBI-ProteinID:
XP_031222671
LinkDB
All DBs
Position
Unknown
AA seq
1221 aa
AA seq
DB search
MSQPPPPPPLPPPPPPPEAPQTSSSLAAAATPGGLSKRRDRRILSGSCPDPKCQARLFFP
ASGSVSIECTECGQRHEQQQLLGVEEVTDPDVVLHNLLRNALLGVTGAPKKNTELVKVMG
LSNYHCKLLSPILARYGMDKQTGRAKLLRDMNQGELFDCALLGDRAFLIEPEHVNTVGYG
KDRSGSLLYLHDTLEDIKRANKSQECLIPVHVDGDGHCLVHAVSRALVGRELFWHALREN
LKQHFQQHLARYQALFHDFIDAAEWEDIINECDPLFVPPEGVPLGLRNIHIFGLANVLHR
PIILLDSLSGMRSSGDYSATFLPGLIPAEKCTGRDGHLNKPICIAWSSSGRNHYIPLVGI
KGAALPKLPMNLLPKAWGVPQDLIKKYIKLEEDGGCVIGGDRSLQDKYLLRLVAAMEEVF
MDKHGIHPSLVADVHQYFYRRTGVIGVQPEEVTAAAKKAVMDNRLHKCLLCGALSELHVP
PEWLAPGGKLYNLAKSTHGQLRPDKNYSFPLNNLVCSYDPVKDVLLPDYGLSNLTACNWC
HGTSVRRVRGDGSIVYLDGDRTNSRSTGGKCGCGFKHFWEGKEYDNLPEAFPITLEWGGR
VVRETVYWFQYESDPSLNSNVYDVAMKLVTKHFPGEFGSEILVQKVVHTILHQTAKKNPD
DYTPVNIDGAHAQRVGDVQGQDLESQLPTKIILTGQKTKTLHKEELNMSKTERTIQQNIT
EQASVMQKRKTEKLKHEQKGHPRTVSPSTIRDGPSSAPATPTKAPYSPTTSKEKKIRITT
NDGRQSMVTLKPSTTFFELQESIAREFNIPPYLQCIRYGFPPKELMPPQAGMEKEPVPLQ
HGDRITIEILKGKAEGGPSTAAHSAHTVKQEEIAVTGKLSSKELQEQADKEMYSLCLLAT
LMGEDVWSYAKGLPHMFQQGGVFYNIMKKTMGMADGKHCTFPHLPGKTFVYNASEDRLEL
CVDAAGHFPIGPDVEDLVKEAVSQVRAEATTRSRESSPSHGLLKLGSGGVVKKKSEQLHN
VTAFQGKGHSLGTASSNPHIDPRARETLAVRKHNTGTDFSNSSIKTEPPVFTAASSNSEL
IRIAPGVVTMRDGRQIDPDVVEAQRKKLQEMVSSIQASMDKHLRDQSTEQTPSDLSQRKG
EVVSSSVRPGNLQTGLPESFSLTGDTENLNTETTDSRVADVLGAAFATRSKAQKENSMEE
PEEMDSQDAETTNTTEPMDHS
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagccgccgcctcctcctccgctgccgccgccgccgcctccccccgaggctccg
cagacttcgtcgtctctggcggcggcggctactccggggggcctttcgaaacgaagggac
cggagaatcctttccgggagttgcccggatcccaagtgccaggcgcggctcttcttcccg
gcctccggttctgtcagcatcgagtgtaccgagtgcggacagcggcacgagcagcaacag
ctgctgggagtggaggaggtgaccgacccggacgtggtgctgcacaatctgctgcggaac
gcgcttctcggagtgacgggggctcccaagaagaacacggaactggtaaaggtgatgggc
ctctccaactaccactgcaaattattgtcgcccatattggcacgctatggaatggacaaa
caaacgggccgggccaagcttctccgggacatgaaccaaggcgaactgttcgattgcgcg
ttactcggtgaccgggccttcctcatcgaaccagagcacgtcaacactgtgggctatggc
aaggaccgctccggaagcctcctatatttgcatgacactctcgaggatatcaaacgggcc
aataaaagtcaagaatgcctcattccagtgcatgtggatggggatggacactgcctagtg
catgctgtgtctagggctctagtaggccgagagctcttctggcatgccctgagggagaat
cttaagcagcactttcagcagcacctagcccgatatcaagccctgtttcatgactttatt
gatgctgccgagtgggaggacattatcaatgaatgcgatcctctgtttgtgccacctgaa
ggtgtccccttaggcctgaggaatatccacatattcggccttgccaatgtgttacatcgt
cccataattcttttagattccctcagtggcatgagaagctctggtgattattcagccaca
tttctacctgggctcatacctgcagagaagtgcactgggagagatggtcatttgaacaag
ccaatctgtattgcgtggagtagctctggaagaaaccattatattcccttggtaggcata
aagggggctgccttgcccaaactacccatgaatttgctacctaaagcatggggtgtgcct
caggaccttattaaaaagtacatcaagcttgaggaggatggtggctgtgttattggagga
gacagaagtttgcaggataagtacttacttaggctggttgctgctatggaagaagtcttt
atggacaaacatggtattcatcctagtttggttgctgatgtacatcagtatttctacaga
agaactggggtgataggagttcagcctgaggaagttacagcagctgctaaaaaagcagta
atggataatcgccttcacaagtgtttgctttgtggtgccctttctgaacttcatgtccct
cctgagtggttggctccaggagggaaactgtataacttggcaaaaagtactcatgggcag
ctgaggcctgacaaaaattacagctttcccttaaacaatttggtttgttcatatgaccca
gtgaaagatgttctgctaccggactatggattgagtaatctaacagcttgtaattggtgc
catggcacatctgtgcgaagagtcagaggagatggctctattgtgtatttggatggagac
agaactaattctaggtctactggtggcaaatgtggttgtggattcaaacacttttgggaa
ggtaaagaatatgacaatctgccggaagcttttcctatcactttggagtggggaggaaga
gtagtcagagaaacagtatattggttccagtatgaaagtgatccatctttgaatagtaat
gtttatgatgttgcaatgaaacttgttaccaagcactttccaggtgaatttgggagtgag
atcctagttcagaaagttgtccacactatattgcatcagactgcaaaaaaaaatcctgac
gattacactcctgtaaatatagatggtgctcatgctcagagagttggagatgtgcaagga
caagatttggagtctcagctaccaactaaaattattcttactggacagaaaacaaaaact
ttgcacaaggaagaattaaacatgagtaaaactgaaagaactattcaacagaacatcaca
gaacaagcttctgtgatgcagaaacggaaaacagagaaattaaaacacgagcaaaagggc
catcccagaactgtttctccaagtactattcgagatgggccatcatctgcacctgccacc
cccaccaaggctccctactcacctaccacttctaaggagaagaagattcgaataacaact
aatgatggacggcagtccatggttactcttaagccttcaacaaccttttttgaacttcag
gaaagtatagccagagagttcaacattcctccatatttacagtgtattcgatatggcttt
cctcctaaagagttaatgccaccccaggcaggaatggaaaaggagccagttccattacag
catggtgacagaattacaatagagatcttaaaaggaaaagcagaaggtggtccatccact
gctgcacactcagcccacactgtgaaacaagaagagattgctgttactggtaaactgtcg
tccaaggaacttcaggagcaagctgacaaagagatgtactccttgtgtcttttagcaaca
ttaatgggagaagacgtgtggtcttatgcaaagggacttcctcacatgttccagcagggt
ggtgtattctacaatattatgaagaaaactatgggcatggctgatggcaaacattgtact
tttccacatctacctggcaaaacctttgtttataatgcttctgaagatagactggagttg
tgtgttgatgctgcaggacatttccccattggtcctgatgttgaagatttagttaaagag
gctgtaagtcaggttcgagcagaggctaccacaagaagtagggaatccagcccttcacat
gggttattaaaactaggtagtggtggagtagtgaaaaagaaatctgagcaacttcacaat
gtaactgcctttcaggggaagggccattctctaggaactgcatccagtaaccctcacatt
gatcccagagctagggaaactctggctgtaagaaagcataacacagggacagattttagt
aatagttccattaaaacagagcctcctgtgttcacagctgcttctagtaatagtgagctt
attcgaatagctcctggagtagtaacaatgagagacggtaggcagattgatcccgatgtg
gttgaggcccagcgaaaaaaattgcaggaaatggtttcttctattcaggcttcaatggac
aagcacttgcgggatcaaagtacagagcaaacaccatctgatctttctcaaagaaaagga
gaagttgtgagttcttctgtgaggcctgggaatcttcagactggcttgcctgaatctttt
tctttaactggtgacactgagaatttgaatactgaaacaactgatagtcgtgtagcagat
gtactgggagcagcgtttgccacaaggtcaaaagcacaaaaagaaaattccatggaggaa
cctgaagagatggatagtcaagatgctgagacaactaacacaactgagccaatggatcac
tcgtga
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integrated database retrieval system
