Mastomys coucha (southern multimammate mouse): 116088285
Help
Entry
116088285 CDS
T07224
Symbol
Arhgef4
Name
(RefSeq) rho guanine nucleotide exchange factor 4 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
116088285 (Arhgef4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116088285 (Arhgef4)
Membrane trafficking [BR:
mcoc04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
116088285 (Arhgef4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_2
SH3_9
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
116088285
NCBI-ProteinID:
XP_031222991
LinkDB
All DBs
Position
Unknown
AA seq
1841 aa
AA seq
DB search
MLSVVHFLRSFFKTPEPGAPPPGESESEDDQLHPCPADQEEQGWHRKTNPEDLETLSHKS
ESRSDTKTDAFESASDAESLPGDLTGEAGLSVEREAGWGCPEDSTVSLPQGQHSVFDEGL
HTEEELDLLSGLKAGSQLNKLHTLTAEKQDEACPCSCVTSLVQESVPAAVCFSKHASSNS
SPHLQKARSRGYLDVPVACPCFRQHCELGQSWPQIHSRTVAAKIPPIGSQDNDFPLWIRT
KKGLAPRPTVGTKLFWVRPFLDVACQPRLGTPCLLDTKCHQSAPENLGANAKTPQRYLCQ
EVMTLVRAHSIASFPLGCPKEPLKQKGPDWPYFQQGTEIEPDHLILHKTLPPGPTQLSCL
LPTSQSKAPPLQGKCKLSDCSFKRTSLDTPCVGLPLENQVEQAPRSCPDPSHLTSELLKL
NSQEEVPRPAECKPGHSSESRLEEPKGVHPDDIIGKQKCLLNISTKGALKEERKPPDRAS
SFPQHCCHGEVPVCSRRLLGSWEEETNSACAPKTALKSSVIDSSEAAEEEVVLDLQGKGN
NALQSLLDFPAVEVSYCNPGSECAQGPRDDPESLASGQPQAPEAYGVSRHSCKFIMIAVK
QEGRQTSTRKAHCLLETQCGDFSEKGTSSTTHESLRAPEMPACGNEHELPGCPGAEPVGG
APQLLAQGIEPVRVSVSRTASDDTLNSEETPEDELLGERLGVGSECVHTEQNQELPSSER
KQGRCGTEDAWMGEVEVPLPGVLASTTMLQFQKQCGGLQQGVLESEQRPTFLQITPLKTD
RPWTGEMPGGDTPYSQTLISEGLNPVFPSPEEGVPHSPCQREPPLHHVHQSVSLETQSGV
IQVGTSGDLSGEGPSPESYNIKRLKTTESRIRARLALAHKTFTNFFEAKVMEKTNTGSVK
GEKGKPRRAQGSWRAFLRNKDAEGSKRPALGSGVPGPDFPQLLCSSPPATRDHCEKWTID
TDSRVFGEPWAPLNSPATLSSSRLASPEHRRKSEPTIKCTATQESSTLVSSGVSPKSSWL
TSATSPGAAQTDISYTLPYSSACHLIYENQGMPCRPTSPKPRSPMAGAQRVDLCLGGRTS
AVSMVSLRSDRDANRCSEAPERPKASKARTSLLLSLQTLNQNDQKEGRSECQCHHGLGTV
PFLRDHPGNESYIAQENPPAKKLSCSHDQKTSAEPTQRPVSATEVVTWTLLSISAEQVPR
EVPFQFRRAPQHSHFSFDDLWIEKTQRRKRERQMLLRRHMGTGLVPVDPVQCWRKTPVTS
PESPHLPRRSHLLSQSAPMGLDHTGWPEPTPDTGMPDGTLDTVCAEETGSEEDLYEELHN
SGHHYSHPRGGGEQLAINELISDGSVVCAEALWDHVTMDDQELGFKAGDVIEVMDATNRE
WWWGRVADGEGWFPASFVRLRVNQDEPADDYEAPRAGAGEADDSGPEAQSCKDQMRTNVI
NEILSTERDYIKHLRDICEGYVRQCRKREDMFSEEQLRTIFGNIEDIYRCQKAFVKALEQ
KFNTERPHLSELGACFLEHQADFQIYSEYCNNHPNACVELSRLTKLSKYVYFFEACRLLQ
RMIDISLDGFLLTPVQKICKYPLQLAELLKYTHPQHRDFKNVEAALHAMKNVAQLINERK
RRLENIDKIAQWQSSIEDWEGEDLLVRSSELIHSGELTRVTQPQARSQQRMFFLFDRQLI
YCKKDLLRRDVLYYKGRLDMDDLEVVDVEDGKDRDLHVSVKNAFRLYCGTTGDSHLLCAR
KPEQKQRWLKAFAREREQVRLDQETGFSITELQRKQAMLNASKQQATGKPKAVGRPGYLT
RHKHPSLPASRPQQQVLVLAEPRRKPSNFWHSISRLAPFRK
NT seq
5526 nt
NT seq
+upstream
nt +downstream
nt
atgctcagtgtggtgcacttccttcgcagcttcttcaagactccagagccaggcgcgccc
cctccaggtgaaagtgagagtgaagacgaccagctccacccatgccctgcagaccaggag
gaacagggatggcaccggaaaacaaaccccgaggacttggagacactgtcccataagagt
gaaagtcggtcggacacaaaaacagatgcctttgaaagcgcttctgatgcagagtccctc
ccaggtgacctcacaggtgaagctggcctctccgtcgaaagagaagcaggctggggatgt
cctgaggactcaacagttagtctccctcaaggacagcactctgtctttgatgaagggctc
cacacagaggaagagctggatctactctcaggcttaaaggcaggttcccagctaaataaa
ttgcacacgttgactgctgaaaaacaggatgaggcatgcccctgcagctgtgtgactagc
ttagtacaggagtctgtgccagccgctgtgtgcttctcaaagcatgccagcagcaacagc
agtccccacctgcaaaaggctaggtctaggggctatctggatgtcccggtggcctgtcct
tgctttcgccaacactgtgaacttggtcagagctggccacaaatccatagcaggactgta
gcagcaaagatacctcccataggctcacaggacaatgacttccctctgtggatcaggaca
aagaagggccttgctccaaggcccacagtgggcacaaagttgttctgggttcgtcccttc
ctagacgtagcctgtcaacctcgattgggtacaccttgtctcttagacaccaagtgtcat
cagagtgccccagaaaatcttggtgccaatgctaagacaccccaaaggtacctttgccag
gaggtaatgactctggtcagggcccattctatagcttcgtttcctttaggttgtcctaaa
gagcctttgaagcagaaaggtccagattggccttactttcagcaagggacagaaatagaa
cccgaccacctgatccttcataagacccttccccctgggcccacccagctgtcttgttta
cttcctacttctcaaagcaaggcccctcctttgcagggcaagtgcaagctgagtgattgt
agctttaagaggacatctctagacacaccctgtgtaggccttccactggaaaaccaggta
gaacaggctcctaggtcatgcccggacccttcccaccttacttcagaattgctaaagctc
aacagccaagaggaagtgcccaggccggctgaatgcaagccagggcacagctcagaaagc
agacttgaggagcccaaaggtgtccaccctgatgatattatcggtaaacaaaagtgcctg
ctaaacatctccacaaagggtgctctcaaggaggagagaaagccacctgatagggcctcc
tccttcccacaacactgctgccatggtgaggtacctgtgtgcagcagaaggcttttgggt
tcctgggaagaagagaccaatagcgcctgtgccccaaagacagccctgaaatcaagtgta
attgactcttcagaagcagccgaagaggaagtggttctagatctccaaggaaaagggaat
aatgccttgcaaagtcttttggatttcccagcagtggaagtatcttactgcaaccctgga
agtgagtgtgcacaggggcctagggatgacccagagtctctcgcttctggccagccgcag
gctccagaagcctacggggtctctaggcacagctgcaaattcattatgatagcagtaaag
caggaaggtaggcagacctctacaaggaaggctcactgtctcctagaaacacagtgtggg
gacttttcagagaaggggacaagctccacgactcatgagtctctcagggccccagaaatg
ccagcgtgtggcaatgagcatgagctaccaggatgtccaggggcagagccagttggtggg
gctcctcagctgctggcccaaggcatagagcctgtgagagtgtcagtctctaggactgct
tcggatgacacattgaactcagaggagacaccagaggacgagctgcttggggaaagatta
ggcgtagggtcagagtgtgtacatactgagcagaaccaggagttgcccagctcagaacgc
aaacaaggaaggtgtggtacagaggatgcatggatgggcgaggtagaggtcccccttcca
ggagtcttggcttcaaccacaatgctgcagttccagaaacagtgcggcgggcttcagcag
ggtgtgctggagtcagagcagcgcccaacctttcttcagataacccctttaaaaactgac
aggccctggactggggaaatgcctggaggggacacaccctacagccagaccttaatctca
gagggcttgaacccagttttccctagccccgaagaaggggtcccacacagtccctgccag
cgggaaccacctctacaccacgtgcaccagagcgtatctctggagacccaatctggtgtg
attcaagtagggacatctggggacctcagcggtgaaggaccttccccagaaagctacaac
atcaagagactgaaaacaacagagagcaggatcagggcaaggctggccttagcccataag
acctttacaaatttttttgaggccaaagttatggagaaaacgaatactggctctgtcaaa
ggtgagaaagggaagcccaggcgagcccagggctcctggcgtgcatttctgagaaacaaa
gatgcagaaggctccaaacgacctgcattagggagtggggttccaggaccagactttcct
caactcctctgctcttccccaccagccaccagagaccactgtgagaagtggacaatcgac
accgacagccgtgtgtttggggagccctgggcacccctaaactcccctgcaactctgtcc
tccagccgtctggcttctccggaacacaggaggaaaagtgaaccaaccataaaatgcact
gctacccaggaaagcagtacgctcgtctcttctggggtctccccaaagtcctcctggctg
acttctgctaccagccccggagcagcgcagactgacatcagttatactctcccctacagc
tctgcctgccacttgatctatgagaaccaaggtatgccctgcagacccacaagccccaag
cccaggagtcctatggctggagcgcagagggtggatctctgccttggaggcaggactagt
gcagtctccatggtctctctcagaagcgacagggacgccaacagatgttcagaagcccct
gaacggcccaaggcatccaaggccaggacgagcctcttactatctctgcaaacattaaac
cagaatgaccagaaggaaggcaggagcgagtgccagtgtcaccatggcctgggcacagtg
cccttccttagggaccatcctgggaatgagagctacatcgcccaggaaaacccaccagcc
aagaagctcagttgttcccatgatcagaaaacttccgcagagcctactcagaggccagta
tctgccactgaagtagtgacctggaccctcctctccatctccgcagagcaagtccccaga
gaggtcccttttcagttcaggagggcccctcagcactcacacttcagcttcgatgaccta
tggatcgagaagactcagagaaggaaacgggagagacagatgctgcttagaagacacatg
ggcacagggttagtgcccgtggacccagttcagtgctggaggaagacacctgtcacctct
ccagagtctccgcacctccctagaagaagccacctgctctcccagagtgccccaatggga
ctggaccacacaggctggccagagcccacgcccgacactgggatgcccgatggaactctg
gacactgtgtgcgcagaggaaacaggcagtgaggaggacctgtatgaagagcttcacaac
tctggccaccactacagccaccctaggggaggtggagagcaactggccatcaatgagctc
atcagtgatggcagtgtggtatgtgctgaagccctgtgggaccatgtcaccatggatgac
caggagctgggcttcaaagctggggatgtcattgaagtgatggatgccaccaacagagaa
tggtggtggggccgagtggcagatggcgaggggtggttccctgccagctttgtacggctg
agggtgaaccaggatgagcccgcggacgactacgaggccccgcgggccggggctggagag
gccgatgacagcggtccagaggcccagagctgcaaggatcagatgcgtacaaatgtcatc
aatgagatcctcagcactgagcgggactacatcaagcaccttcgcgacatctgcgagggc
tatgtccgccagtgccgcaagcgggaggatatgttcagtgaagagcagctccgcaccatc
tttgggaacatcgaggacatctaccgctgccaaaaggcgtttgtgaaggctttggagcag
aagttcaacacagagcggccacacctgagcgagctgggtgcctgctttctggaacaccaa
gcagacttccagatctattctgagtactgcaacaaccaccctaatgcctgcgtggagctc
tcccggctcaccaagctcagcaagtacgtgtacttcttcgaggcctgccggctgctgcaa
agaatgattgacatctcgctggatggctttctactgaccccggtgcagaagatctgcaag
tatcccctccagttggcggagctgctcaagtacacacacccccagcacagggactttaag
aatgtggaagccgccttgcacgccatgaagaatgtggcccagctcattaacgaacggaaa
cgaagacttgaaaacatagacaagatcgctcagtggcagagctccatagaggactgggag
ggggaagatctcctggtcaggagctcggaactcatccactcgggggaactgacccgcgtg
acacagcctcaagccaggagtcagcagagaatgttttttctctttgaccgccagctcatc
tactgtaaaaaggatctgctccgccgggacgtgctgtactacaagggccggctggacatg
gatgacctggaggtggtagatgtggaagacgggaaggacagagacctccatgtgagcgtc
aagaatgctttccgtctgtactgtggtaccacgggggacagccacttactgtgtgccagg
aaaccagaacagaagcagcgctggctgaaggcctttgccagagagagggagcaggtgcgg
ctggaccaggagacaggcttctccatcaccgagctgcagaggaagcaggccatgctgaat
gccagcaagcagcaggccacagggaagcctaaagctgtcggcaggccaggatacctgacc
cgccacaagcatccatcattgcctgccagccggccgcagcagcaggtgttggtgctagca
gagcccaggcggaagccatctaacttctggcacagcatcagccgactggcacccttccga
aagtga
DBGET
integrated database retrieval system
