Mastomys coucha (southern multimammate mouse): 116088297
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Entry
116088297 CDS
T07224
Symbol
Chm
Name
(RefSeq) rab proteins geranylgeranyltransferase component A 1 isoform X1
KO
K23460
Rab proteins geranylgeranyltransferase component A
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mcoc01006
]
116088297 (Chm)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116088297 (Chm)
Prenyltransferases [BR:
mcoc01006
]
Protein prenylation
Rab geranylgeranyltransferase
116088297 (Chm)
Membrane trafficking [BR:
mcoc04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
116088297 (Chm)
Endosome - Lysosome transport
Rab GTPases and associated proteins
116088297 (Chm)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GDI
RAE1_2_domI_C
NAD_binding_8
FAD_oxidored
Motif
Other DBs
NCBI-GeneID:
116088297
NCBI-ProteinID:
XP_031223031
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Position
X
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AA seq
650 aa
AA seq
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MADNLPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLK
DYQENSDVVTENSMWQEQILENEEAILLSSKDQTIQHVEVFCYASQDLHKDVEEAGALQK
NHASVTSTHSTEAAEAAEPACLPTAEESLSTGSCEIPAEQSQCSGPESSPEGNDAEEAGE
KETQCDAKSSTEESSENVLKVQDNIETPKKNRITYSQIIKEGRRFNIDLVSKLLYSRGLL
IDLLIKSNVSRYAEFKNITRILAFREGTVEQVPCSRADVFNSKQLSMVEKRMLMKFLTFC
MEYEDHPDEYKAYEETTFSEYLKTQKLTPNLQYFVLHSIAMTSETTSSTVDGLKATKKFL
QCLGRYGNTPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESGKCKAMIDQ
FGQRIISKHFVIEDSYLPENTCSRVQYRQISRAVLITDGSVLKTDSDQQVSILTVPAEEP
GGFAVRVIELCSSTMTCMKGTYLVHLTCMSSKTAREDLERVVQKLFAPYTEIEAEKERVE
KPRILWALYFNMRDSSDISRDCYDLPSNVYVCSGPDCGLGNDNAVKQAETLFQRICPNED
FCPAPPNPEDIILDGDSSQQEVSESSVISETNSEIPKESTVLGNPEEPSE
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcggataatctcccttcggactttgatgtgatcgtaatagggacgggtctgcctgaa
tccatcattgcagctgcatgttcaaggagtggccagagggttctgcatgttgattcaaga
agctactatggaggaaactgggccagtttcagcttttcaggactgttgtcctggctaaag
gactatcaggaaaatagtgatgttgtgactgaaaattcaatgtggcaagaacagatcctt
gaaaacgaagaagctattcttcttagtagcaaggaccaaacaattcaacatgtagaagta
ttttgttatgccagtcaggatttgcacaaagatgttgaagaagctggtgcactgcagaaa
aatcatgcttctgtgacatccacacactccacagaggctgcagaggctgcagagcctgct
tgccttcctactgcagaggagtcattaagcacggggagctgtgaaatacctgccgaacaa
agtcagtgcagtggtccagagagttcaccagaaggaaatgatgctgaagaagcaggagag
aaggaaactcagtgtgacgctaaaagttcaacagaagaatcaagtgaaaatgtgcttaaa
gtacaagacaacatagagacaccaaagaaaaatagaattacttattcacagattattaaa
gaaggcagaagatttaacattgatttagtttcaaaacttctctattctcggggattacta
attgatcttctaatcaaatcaaatgttagtcgatatgcagagtttaaaaatattacgagg
attcttgcatttcgagaaggaactgtggaacaggttccctgttccagagcagatgtcttc
aatagcaagcaacttagtatggtagaaaagcgaatgcttatgaaatttcttacattttgt
atggaatatgaagaccatcctgatgagtacaaagcatatgaggaaactacattttctgaa
tacttaaagactcaaaaattaacccccaacctacagtactttgtcctgcactcaattgca
atgacatcagagacaacaagctctactgtagatggtctcaaagctactaaaaagtttctt
caatgtcttgggcggtatggcaacactccttttctgtttcctttatatggccaaggagaa
cttccacagtgtttctgcagaatgtgtgctgtgtttggtggaatctattgtcttcgccat
tctgtacagtgccttgtagtggacaaagaatccggaaaatgtaaagcaatgatagatcaa
tttggtcaaaggataatctctaaacatttcgtgattgaagatagttaccttcctgagaat
acatgttcccgtgtacagtacaggcaaatttccagggcagtcctgattacagatggatct
gtactaaaaacggattcagatcaacaggtctccattttgacggtgccagcagaagagcca
ggaggttttgctgttcgagtcattgagttatgctcttcaaccatgacatgtatgaaaggc
acatatttggtacatttgacttgcatgtcttctaaaacagcaagagaagacttggaacga
gtagtccagaaattatttgctccatatacagaaatagaagcagagaaagaacgggttgaa
aagccaagaattctttgggcactctacttcaatatgagagactcttctgatatcagcaga
gattgttatgatttaccgtccaatgtctatgtgtgctctggccctgactgtggtctagga
aatgataatgcagtcaaacaggcggaaacacttttccagcgaatctgcccaaatgaagac
ttctgtccagccccgccaaatcctgaagatattattcttgatggagacagctcacaacaa
gaagtttcagaatccagtgtcatatcagaaaccaactcagagattcccaaagaaagtaca
gtcctaggaaacccagaagagccctctgaatag
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