Mastomys coucha (southern multimammate mouse): 116088329
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Entry
116088329 CDS
T07224
Symbol
Aff3
Name
(RefSeq) AF4/FMR2 family member 3 isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcoc03021
]
116088329 (Aff3)
Transcription machinery [BR:
mcoc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
116088329 (Aff3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
Motif
Other DBs
NCBI-GeneID:
116088329
NCBI-ProteinID:
XP_031223132
LinkDB
All DBs
Position
Unknown
AA seq
1330 aa
AA seq
DB search
MEIHTFRSQTGSSKYLSAVHGQQGPCTNVYLASGGLWSSAACSARAARGSAAAAAADTAA
AAADTAAAADTAAALTPPTMDSFDLALLQEWDLESLWGEDILSQRNDSLVLEVQASASRC
RSVYEPDRNALRRKERERRSQETQQDSGGFNSGYSLFSEPYKTNKGDELSNRIQNTLGNY
DEMKDFLTDRSNQSHLVGVPKPGVPQTPVNKIDEHFVAESRAQPQPSSVCSTASSTPAAV
PVQQGKRGTMGWQKAGHPSSDGQQRAAQQGSLRTLLGDGVGRQQTRAKQVCNMEAGLQTQ
ERPPTMAAKHGGSGHCVQNFPPSLASKPSLVQQKPTAYVRPMDGQDQAPDESPKLKSSTE
TAVHCTAYRGAPANKPESARAKAKLAKFSIPKQGEDSRSGESNSCVEEIIREMTWLPPLS
AIHAPAKVEPSKFPFPNKDSQLVSSGHSNPKKADAEPESPDNGTSNTSTLEDDLKLSSDD
EEGEQQAAQRTTLRALADSSVVQQTNCRGSAPSSKGGSSSSSGGSSSSSDSESTSGSDSE
TESSSSESESEGSKPPHCSSPEAEPASSNKWQLDKWLNKVNPHKPPILIQNESHGPERNQ
YYTPLVKDEGQDCGKLPEICQASLRDKELKTTCKEEQRPRTANKAPGSKSVKQKSPPAAV
AVTTAALPPVPSAPTESAPAPTRRSAGKKPTRRTERTSAGDGANCHRPEEPVAPDTLGAS
VVGPLEPPKTRPCGNSRTGHRKELRSSVTCEKRRTRGLSRIVPKSKEFIETESSSSSSSS
DSDLESEQEEYILSKAPTTTGSEQRLKEAASSSSSSSSSSTSRASVGSINARTTSDIAKE
LEEQFYTLVPFGRNELLSPLKDSDEVRSLWVKIDLTLLSRIPEHLSQEPGVLSAPAAKDT
DSAPASHALDTPAEKTLPKSKRKRKCDNEDDYREIKKAQGKKESASRLAASTNNTLSGSH
CNMTINSLAIPINKNEKMLRSPTSPLSDACKHKYSSEDLTSSNRPHGNGLLTSVASNKEP
KAESQQQTHAGDLTKASHNSSENGILHGKSRPQTEPWSPGSNGHRDCKRQKLIFDDMPRS
ADYFMREAKRMKHKADAMVEKFGKALNYAEAALSFIECGNAMEQGPMESKSPYTMYSETV
ELIRYAMRLKTHSGPNATPEDKQLAALCYRCLALLYWRMFRLKRDHAVKYSKALIDYFKN
SSKAAQAPSPWGSSGKSTGSPSPMSPNPSPASSVGSQGSLSSSSGLSPSTIVSIPQRIHQ
MAANHVSITNSILHSYDYWEMADNLAKENREFFNDLDLLMGPVTLHSSMEHLVQYSQQGL
HWLRSSAHLS
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atggagatacacactttcaggagccagacaggatcttctaagtacctctctgcagttcac
ggacagcaaggaccttgtacaaacgtgtacttggcaagtggaggcctgtggagttcagcg
gcatgcagcgcgcgggcggcccgaggctcggcggcggcggcggcggcggacacagcagcg
gcggcggcggacacggcggcggcggcggacaccgcggcggcgctgacacctcccaccatg
gacagcttcgacttagccctgctccaggaatgggacctcgagtcgctgtggggtgaagat
atcctaagccagaggaatgattctctagttctggaagttcaggcatcagccagcagatgc
aggagtgtctatgaaccagacaggaatgcgttacggaggaaagagcgagaaagaagaagt
caagaaacacagcaggacagtggcggctttaactccggttactcgctcttcagtgaaccc
tacaagactaacaagggggatgaactctccaaccggatccagaatacattaggaaattat
gacgagatgaaagactttttaactgatagatccaaccagagtcatcttgttggtgtcccc
aagccaggtgtccctcagactcctgtgaacaagatcgatgaacattttgtggcagagtcg
agagcacagccccagccctcatctgtctgcagcactgcgtcctccacacctgcagctgtc
cctgtgcagcagggaaagagaggcaccatgggctggcagaaggctgggcacccgtcgtcc
gatggccaacagagagcagcacaacagggctctctcaggaccttgcttggagatggtgtt
ggcagacagcagacaagggccaagcaagtgtgcaatatggaggcggggcttcagacccag
gagaggccacctacaatggcagccaagcacggcggcagtggacactgtgttcagaacttt
cccccatccctggcttcaaaacccagcctggtgcagcagaaaccaactgcctacgtgcgg
ccaatggatggccaggaccaggctcctgatgaatctcctaagcttaagtcatccacggaa
actgctgtgcactgcacagcctacagaggggccccagccaataaaccagagtcagccaga
gccaaggccaagcttgctaagttcagcatccccaagcaaggagaggacagtagatctgga
gaaagcaacagctgtgtggaagaaataattcgggagatgacctggcttcctccactttcc
gctattcatgctcctgccaaagtggaaccaagcaagttcccattcccaaataaggactcg
caacttgtatcttctggacacagtaatccaaagaaagctgatgcggagccagagagtcca
gacaatggcacatcgaacacttcaactctggaagatgaccttaagctaagcagtgatgat
gaagagggtgagcagcaggcagcccagagaacaactctccgcgctctagctgacagctcc
gtggtacagcagaccaactgtagaggttcggcgccatccagcaagggcggcagcagcagc
agcagcggcggcagcagctcctccagcgactcagagagcacttccggctccgactccgag
acggagagcagctccagcgagagcgagagcgagggcagcaagcctccgcactgctccagc
cccgaggccgaacctgcatcctctaacaagtggcagctggataaatggctaaacaaagtt
aatcctcacaagccgccaattctgatccaaaatgaaagccacggcccggaaaggaatcaa
tactacacgccgctggtgaaagatgaagggcaagactgcgggaaacttcccgagatctgc
caagccagcctgcgggacaaggagctcaagaccacctgcaaggaggagcagcggccgagg
accgcaaacaaggcccctggcagcaaaagtgtaaagcaaaagtccccacccgctgcggtg
gctgtgaccacagctgccctgccgcccgtgcccagcgcacccacggagagcgcgcccgcg
cccacccgcaggtcagcaggcaagaagcccacccggcgcacggagcggacttcagccggg
gacggtgccaactgccaccggcctgaagagccagtggccccagacacgctgggggcaagc
gtggtgggacccctagagccccccaaaaccaggccctgcggtaacagcaggacaggccac
cgcaaggagctgcgctcctcagtgacctgtgagaagcgacgcacacgggggctgagcaga
atcgtccctaaatccaaggagtttattgaaacagaatcttcgtcttcctcttcctcctcg
gactcagacctggagtcagagcaagaggagtacatcctgtccaaagctccgaccaccact
gggagtgagcagcggctgaaggaggctgccagcagcagcagcagcagcagcagcagcagc
acctctcgggcttctgtgggctccatcaacgccaggaccaccagtgacattgccaaggag
ctagaggaacagttctacacgctggtcccctttggcaggaatgaactgctttctccgcta
aaggacagcgatgaggtcaggtctctctgggtcaaaattgacctgaccctcctgtccagg
atcccagaacacctgtcccaggagcctggggtcttgagtgctcctgcagccaaggacact
gatagtgccccagccagccatgcattagacacacctgctgaaaagactttgccaaaatcc
aagagaaaacgcaagtgtgacaatgaagatgactacagggagataaagaaggcccaggga
aagaaggagagtgcttcacgcctcgccgcctccactaataacaccttgtccggcagccac
tgcaacatgaccatcaacagcttggcaataccaataaacaaaaatgaaaagatgctccgg
tcgcccacttcgccactctctgacgcatgtaaacacaaatactccagtgaggatttgact
tcttccaaccgacctcatggcaatgggttgttgacttcagtggcttccaacaaagagcct
aaggctgagagccagcagcagacgcatgctggggacctcacgaaggcatctcacaacagt
tccgaaaatggcatcctccatggcaagtcacggccccagactgagccgtggtctccaggt
tccaatggccacagggactgcaagagacagaaactgatcttcgatgacatgcctcgaagt
gctgattactttatgcgagaagctaagcggatgaaacataaagcagacgccatggtggag
aagttcgggaaagccctgaactatgcagaagcagccttgtccttcatcgagtgtggaaac
gccatggaacaagggccaatggaatccaagtctccatacaccatgtactcagagacagtg
gagctcatcaggtatgctatgagactaaaaacccactcaggccccaatgccacgccagag
gacaagcagttagctgcactttgttaccgatgcctggccctcctatactggcggatgttt
cgactcaaaagggaccatgctgtaaaatattcaaaagcacttatcgactatttcaagaat
tcatcgaaagctgcccaagccccatccccatgggggtccagtggcaagagcactggaagc
ccatcccccatgtctcccaacccttctcccgccagctccgtggggtctcagggcagcctc
tccagctccagtggcctgtccccttcgaccatcgtcagcatcccccagcgcattcaccag
atggcggccaatcacgtcagcatcaccaacagcatcctccacagctacgactactgggag
atggctgataacctggccaaggaaaacagagagttcttcaatgacctggatttgctcatg
ggacctgtcaccctgcacagcagcatggaacacctggtccagtactcccagcaaggcctg
cactggctgcggagcagcgcgcacctgtcctag
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integrated database retrieval system
