Mastomys coucha (southern multimammate mouse): 116088542
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Entry
116088542 CDS
T07224
Symbol
Bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116088542 (Bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcoc03019
]
116088542 (Bard1)
04121 Ubiquitin system [BR:
mcoc04121
]
116088542 (Bard1)
03036 Chromosome and associated proteins [BR:
mcoc03036
]
116088542 (Bard1)
03400 DNA repair and recombination proteins [BR:
mcoc03400
]
116088542 (Bard1)
Messenger RNA biogenesis [BR:
mcoc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
116088542 (Bard1)
Ubiquitin system [BR:
mcoc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
116088542 (Bard1)
Chromosome and associated proteins [BR:
mcoc03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
116088542 (Bard1)
DNA repair and recombination proteins [BR:
mcoc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
116088542 (Bard1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_6
Ank_4
Ank
Ank_2
Ank_3
Ank_5
BRCT
BRCT_2
zf-RING_5
zf-C3HC4
zf-C3HC4_2
ANK_LRRK2
zf-C3HC4_4
zf-rbx1
zf-C3HC4_3
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
116088542
NCBI-ProteinID:
XP_031223710
LinkDB
All DBs
Position
Unknown
AA seq
764 aa
AA seq
DB search
MPRRTPRVCSGNKPPPVPAMEPATDGLWAHSRAALARLEKLLRCSRCANILKEPVCLGGC
EHIFCSDCISDCVGSGCPVCDTPAWILDLKINRQLDSMIQLYSKLQNLLHDNKVSDSKDD
TSRASLFGDAERKNNKIKMWFSPRSKKIRCVVNKASEQTKPQKAKDGQAQEVSVYNFVSA
TPPVVVSKRAKAASRTSVKKHPKKSVAKVNREEDFRPETKGRFDSNEELKEEKVVSYSQM
PVMESSRVNGEIDLLASGSVESECSGSLTEVSLPLAEHIVSPDTVNDSEETPEKKVCVKD
LRSVGSNGNRKGSHRPPTSTSKNCGNNIPRISRDIGEPTLLAENVVLVDCSSLPSGRLQV
DVTLRRKSNASDDSLSLSPGTPPPLVNNSTHKRMMSSPSTVKLSSGIPTQKRNHRGETLL
HIASIKGDIPSVEYLLQNGNDPNVKDHAGWTPLHEACSHGHLKIVELLLQHNALVNTTGY
QNDSPLHDAVKNGHIDIVKVLLSHGASRNAVNIFGVRPVDYTDNEHIRSLLLLSEKNESF
STSQCSVVSAGRRKDGPLVLIGSGLSSQQQKMLSQLEAVLKAKRCAQFDSTVTHVIVPDE
AQSTLKCMLGILNGCWILKFDWVKACLDSKVREKEERYEVPGGPQRSRLNREQLLPKLFD
GCYFFLGGNFKHHPKDDLLKLIAAAGGKVLSRKPKADSDVTQTINTVAYHAKPDSDQRFC
TQYIVYEDLFNCHPERIRQGKVWMAPSTWLISCIMAFELLPLDS
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgccggacgccgagggtctgctctgggaacaagcctcctcccgtgcccgccatg
gagccggctaccgacgggctctgggcccacagccgcgcggcgcttgcccgcctggagaag
ctgctgcgctgctcccgctgtgctaatattctgaaggagcccgtgtgcttaggaggatgt
gagcacatcttctgtagtgattgtataagtgactgtgttggatcaggatgcccagtgtgt
gacaccccagcctggatcctagacctcaagataaatagacagttggacagcatgatccag
ctttatagtaagcttcaaaatttgctacatgacaataaagtttcagattcaaaagatgac
acctctagggcaagtttatttggtgatgcagaaaggaagaataataaaataaaaatgtgg
tttagtcctcgaagtaagaagattagatgtgttgtgaataaagcgtcagaacaaacgaag
cctcagaaggcaaaggatggccaagcccaggaagtctcagtgtataactttgtttctgca
actccccctgtagttgtttctaagagggctaaagcagcttctagaacatctgtgaaaaag
catccgaagaagtcggtagctaaggtcaaccgggaggaggatttcaggccagaaacaaag
ggtagatttgattccaacgaggagctgaaggaagagaaggttgtctcctatagccaaatg
ccagttatggagagttcacgggtaaatggcgaaatagacttattagcaagtggctctgta
gaatctgaatgttctggaagcttgactgaagtctctttaccgttggctgagcatatagtg
tctccagacactgtgaacgacagtgaagagactccggagaagaaggtctgtgtcaaagat
cttcgttctgtagggagtaatggaaatcgtaaaggcagccacagacctcccacttctact
tctaagaattgtgggaacaacattccaaggatcagcagagacattggtgagcccacgttg
cttgcagaaaacgtagtgttggttgactgttcctcactgccttcaggccgacttcaggtt
gatgtcacactcaggagaaagagtaacgcatcagatgactcccttagcctttcaccgggc
acacccccacctctggtgaacaattcaactcacaaacgaatgatgtcaagcccctccaca
gtgaagctgtcttctggtattccaactcagaaaagaaatcatagaggagagactttactt
catattgcttctattaagggtgatataccttctgttgaatacctcttgcaaaatggaaac
gaccccaatgttaaagaccatgctggatggacaccgttgcatgaagcctgcagtcatggg
cacctgaagatagtggagttgctgctccagcataatgccttggtgaacaccactggctat
cagaatgactcgccactccacgatgctgtcaagaacggccacattgatatagtcaaggtg
ttactgtctcacggtgcttccaggaatgctgttaacatatttggtgtgcgaccggtggat
tatacagacaatgagcatataagatcattgctgctgctgtcagagaagaatgaatcgttc
tcaaccagccagtgctctgttgtgagcgctgggcggcggaaggatgggccgctggtgcta
ataggcagtggactctcttcccagcagcagaagatgctcagccagcttgaggcggtgctt
aaggctaaaaggtgtgctcagtttgacagcacagtgactcatgttattgttcctgatgaa
gctcagagtactttgaagtgtatgcttggcattctcaatggatgctggatcctgaaattt
gattgggtgaaagcctgtctggacagcaaagtacgcgagaaggaagaaaggtacgaagtt
ccaggagggccacagaggagcaggctcaacagagagcagctgttgccaaagctgtttgat
ggatgctacttctttttgggaggaaacttcaaacatcacccaaaggatgacctcctgaag
ctcattgcagcagcaggaggcaaagtcctcagtagaaagcccaaggcagacagcgatgtg
actcagaccatcaacacagttgcataccatgccaagcctgattctgatcagcgcttctgt
acgcaatacatcgtctatgaagatctgtttaactgtcacccagagaggattcggcagggc
aaagtctggatggctccttccacctggcttatcagctgtataatggcctttgaattgctt
cctcttgacagctga
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integrated database retrieval system
