Mastomys coucha (southern multimammate mouse): 116088543
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Entry
116088543 CDS
T07224
Symbol
Abca12
Name
(RefSeq) ATP-binding cassette sub-family A member 12
KO
K05646
ATP-binding cassette, subfamily A (ABC1), member 12
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116088543 (Abca12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mcoc02000
]
116088543 (Abca12)
Transporters [BR:
mcoc02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
116088543 (Abca12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
Rad17
DUF4162
DUF1846
Motif
Other DBs
NCBI-GeneID:
116088543
NCBI-ProteinID:
XP_031223714
LinkDB
All DBs
Position
Unknown
AA seq
2595 aa
AA seq
DB search
MASQFHQLRILVWKNWLGVKRQPLWTLVLILWPVIIFIILAITRTKFPPTAKPTCYLAPR
NLPSAGFFPFLQTLLCDTDSKCKDTPYGPRDLLRRKGIDETLFKESEILKKPSNPKRDSN
LSLRSTQVPERSHTSLVTAPPRPSYDLERMGTENFNGSQFLTRILDLEKLLKQNSTPEAI
RRELCETYPGYTANYAFSWITLGKNVFNKFCLSNMTLLESSLQELKYQVSQMSSDPDNQK
RVFQGLVQMLSFFSQVQQRREVWQLLSSLPDVFQNDTSLSSLFGVLQKANRVLLVVQKVY
PRAQADEGFSTLQKSVKHLLNTLDSPAQGDNSTHAWSDDDEQTLSPSSLAAQLLILENFE
DAILNISSKSPYSPYLACVRNMTDNLVKGSPDNLKLLQSTIHLRKSFLQNGSSEDSFPPF
LEILKSKLSQLRNLTELLCESETFSSIEKSCQFSNMNFKRLCGDHAFHVQLIEAAELGTD
LATGLLYHDNVVSAKLRDLLTGDPSKINLDMDWLLEQALQMNYLENITRLIPTVEAMLRV
NTSADASEQPGQLIEMFKNIDLLKEDLRAIGMSNTSIDKLLAIPIPDNRAEIISRVFWLH
SCDTNVTNPKLEDAMKEFCKLPLPERSHQSYLIGLTLLHYLDIYNFTYKVFFPRKDQKPM
ERMMELFIKLREILNQLASGTHPLLDKMRSLRQMHLPRSVPLTQAMYRNTRMNTPAGSFS
TISQALCSQGITTEYLTSMLPSSQKPKGNHTKDFLTYKLTKEEIASKYGIPLSATPFCFS
LYKDIIKMPAGPVIWAFLKPMLLGKILYSPYNPTTKAIMEKSNVTLRQLAELREKSQEWM
DKSPIFMNSFHLLNQTIPMLQNTLRNPFVQVFVKFSVGLDAVELLKQIDDLDVLRLKLVN
NIDIIDQLNTLSSLTVNISSCVLYDRIQAADTVEEMEMVAEQLYKSNELFGSVIFKLPSN
SSSPRGFDSEKVSLPPIVRYTIRMSLKTAQTTRSIRTKIWAPGPHNSPSHNQIYGRAFIY
LQDSIERAIIELQTGRNSQEVAVQVQAVPYPCFMKDNFLTSVSYSLPIVLMVAWVVFIAA
FVKKLVYEKDLRLHEYMKMMGVNSCSHFFAWLIESIGFLLVTIGILIVILKFGNILPKTN
GFILFLYFSDYSFSVIAMSYLISVFFNNTNIAALIGSLIYVIAFFPFIVLVTVEDELSYV
IKVFMSLLSPTAFSYASQYIARYEEQGVGLQWENMYKSPVQDDTTSFGWLCCLILADSFI
YFFIAWYVRNVFPGTYGMAAPWYFPVLPSYWKERFGCAEVKHEKSNGLMFTNIMMQNTNP
SANKTSPDCAFPSNIEPEPKDLQVGVALHGVTKIYGSKTAVDNLNLNFYEGHITSLLGPN
GAGKTTTISMLTGLFGATAGTIFVYGKDIKTDLNTVRKNMGVCMQHDVLFSYLTTKEHLL
LYGSIKVPHWTKKQLHEEVKRTLKDTGLYSHRHKRVGTLSGGMKRKLSISIALIGGSRVV
ILDEPSTGVDPCSRRSIWDVISKNKTARTIILSTHHLDEAEVLSDRIAFLEQGGLRCCGS
PFYLKEAFGDGYHLTLTKKKSPNLDTNTICDTVAVTAMIQSHLPEAYLKEDIGGELVYVL
PPFSTKVSGAYLSLLRALDKGMGKLNIGCYGISDTTVEEVFLNLTKDSQKSGNMSLEHLT
QRKVGNPSANGISTPDDLSVSSSNFTDRDDKALTRSKKLDGFGLLLKKIMAILIKRFHHT
RRNWKGLVAQVILPIVFVATAMGLGTLRDSSNSYPEIMISPSIYGTSEQTAFYANFDPAT
DGLVSALWNFPGIDNVCLNTSDSQCLKKDDLGKWNTSGEAIDNFGVCSCSDNVQECPKFN
YSPPHRRTYSSQVIYNLTGKHMENYLISTANHFVQKRYGGWSFGLKLTNDLRFDVTAVPD
NRTLAKVWYDPEGYHSLPAYLNSLNNFLLRVNMSEYDAARHGIIMYSHPYPGVQDQEQAT
ISSLIDILVALSILMGYSVTTASFVTYIVREHQTKAKQLQHISGIGVTCYWVTNFIYDMV
FYLVPVAFSIGVIAIFKLPAFYSGNNLGAVSLLLLLFGYATFSWMYLLAGLFHETGMAFI
TYVCVNLFFGINSIVSLSVVYFLSKEKPNDPTLELISETLKRIFLIFPQFCFGYGLIELS
QQQAVLDFLKAYGVDYPSETFEMDKLGAMFVALVSQGTMFFLLRLLINEWLIKKLRLFFR
KFTSSPIMETVDEDEDVQAERLRVESGAAEFDLVQLHRLTKTYQLIHKKIIAVNNISLGI
PAGECFGLLGVNGAGKTTIFKMLTGDIIPSSGNILIRNKSGSLGHVDSHSSLVGYCPQED
ALDDLVTVEEHLYFYARVHGIPEKDIKETVHKLLRRLHLMPYKDRSTSMCSYGTKRKLST
ALALIGKPSILLLDEPSSGMDPKSKRHLWRIISEEVQNKCSVILTSHSMEECEALCTRLA
IMVNGRFQCIGSLQHIKSRFGRGFTVKVHLKNNKVSMETLTKFMQLHFPKTYLKDQHLSM
LEYHVPVTAGGVANIFDLLETNKTALNITNFLVSQTTLEEVFINFAKDQKSYENVDTSSQ
GSTISVDSQEDQLDS
NT seq
7788 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccagtttcatcagcttcggatcctggtgtggaaaaattggctaggtgtcaaa
aggcagccgctttggacacttgtcttgatcttatggccagtcattattttcataattctg
gctattacccggacaaaatttccaccaacagcaaaaccaacttgttacctcgcacctcga
aaccttcccagtgctggattcttcccattcctacaaaccctcctctgtgacacagactct
aaatgtaaagacacaccctatgggccacgagatctgctccgcaggaagggaattgatgaa
acactatttaaagaaagtgaaattctgaaaaagccatccaacccaaagagggacagcaat
ttatcacttcggagcacccaagttccagaaagaagtcacacatcattggtcacagcacct
cctagaccaagctacgatttggaaagaatgggcacagaaaatttcaacggtagccaattt
cttacacgcatccttgatttggaaaagctgctgaagcaaaattcaactccagaagccata
cgaagagagctctgtgagacctaccctgggtacactgcgaactatgccttttcttggatc
accctaggaaaaaatgtttttaacaaattttgcctttcaaacatgacacttttagagtcc
tcgctccaggaactaaaatatcaggtctctcagatgtcaagtgaccccgacaatcagaag
agggtgttccagggacttgtccagatgctgtccttcttctctcaagtgcagcagcgaaga
gaagtgtggcaacttctgtcaagcctaccagacgtgtttcagaatgacacctcgctgagc
agtctatttggtgttcttcaaaaggcaaacagggtgctgctggtagtgcagaaggtttac
ccacgtgctcaagccgatgaaggattcagcaccctccagaagtctgttaaacatctgctg
aacactctggactcgccagcacaaggtgacaattcaacgcacgcgtggagtgatgatgat
gagcagacactgtccccaagcagtctggctgcacagctcctgatcctggaaaattttgaa
gatgccatcttgaacatatcatcaaagagtccatactctccttacttggcttgtgtaagg
aacatgactgacaacttggttaagggatcgccagacaatctaaaacttctgcagtccaca
attcacctcagaaaatctttccttcaaaatggctcctctgaggacagcttccctccattt
cttgagatcctgaaatccaagctgtctcaacttcgaaacttgacggaacttctctgcgaa
tcagagactttcagttcgatcgagaagtcttgccagttctctaacatgaacttcaagagg
ctgtgtggagaccacgcctttcacgtgcaactgatcgaagcggcagagctgggcaccgat
ctcgccactggcttgctgtaccacgacaatgtagtatctgcaaagctgagggatttgctc
actggagatcccagtaaaattaatctcgacatggactggctcttggagcaggcgttgcaa
atgaattacttggaaaatatcacacggctaataccaaccgtagaggccatgctgcgtgtc
aacaccagcgcagatgcttccgagcagccaggtcaattaatagaaatgtttaaaaacata
gatttgctgaaggaagatctgagggccataggaatgtccaacacaagtatcgacaagctg
ctggccattcccatcccagacaacagagccgagataatttctcgtgtattctggttgcac
tcatgtgatacaaacgtcaccaaccccaaactggaagatgccatgaaggaattctgcaag
ctgccccttccggagagatcacatcagtcctacctcattggactcacccttctgcactac
ttagacatttacaatttcacatacaaggtgtttttcccaaggaaagatcaaaagccaatg
gaaaggatgatggagcttttcataaagctgagagagattctcaatcagttggcttccggc
acacatccactgctggacaaaatgagatccctgagacaaatgcatctgcccaggagtgtt
ccattaacacaggccatgtacagaaacaccaggatgaacacgccggcaggatctttcagt
accatctcccaagctctgtgttcccaagggatcaccaccgagtacttaacctctatgctg
ccttcttcccagaagccaaaaggcaaccacaccaaggattttctcacttataaattaacc
aaagaagaaattgcttcaaaatacgggattcctttaagtgctacaccattttgcttctcc
ctttacaaagacatcattaaaatgcctgctgggcctgtgatttgggccttcttgaaaccc
atgttgttgggaaagattttatattcaccatataacccaactacaaaggccattatggaa
aagtccaatgtaactctgagacagctggcggaattaagagaaaaatctcaggaatggatg
gataagtcaccaatcttcatgaattccttccacctgctgaaccagaccatcccaatgctc
cagaatactctgcggaacccctttgtgcaagtttttgtgaagttctccgtgggactcgat
gctgttgaactcctgaagcagatagatgaccttgatgttctcaggctgaaattagtgaac
aacattgacatcatcgatcagcttaacacgctgtcttccctgacagtaaatatttcctcc
tgtgtactttacgaccgtattcaggcggcagacacagtggaggagatggaaatggtggcc
gaacagctctacaagagcaacgagctctttggaagtgtcatttttaagcttccgtctaac
agcagttcacccagaggctttgactctgaaaaagtctctcttcctcctatcgtaagatat
accatccgcatgagtctgaagacggcacagaccactaggagcataagaacaaagatttgg
gccccggggccacacaactctccatcacacaaccagatctatggccgggctttcatttat
ctgcaagacagtattgaaagagcaatcattgagttacaaacaggaaggaactcacaggaa
gtcgcagtccaggtccaagcggttccctatccgtgcttcatgaaggacaacttcctcacc
agcgtctcctattccctcccgatcgtgcttatggtcgcctgggttgtatttatagctgcc
tttgttaaaaagcttgtctatgagaaggacctgcggctccatgagtacatgaagatgatg
ggcgtgaactcctgcagtcatttctttgcctggcttatagaaagtatcgggttcttactg
gtcaccattggcatcctcatcgttatcctcaagtttggcaatattcttcccaagacaaac
ggcttcattttgttcctgtacttttcggactacagcttctcagtgattgccatgagctat
ctcatcagtgtcttcttcaacaacaccaacattgcagctctgattggaagcctcatctac
gtcattgcctttttcccgtttattgttctggttacagttgaggatgagttgagctatgtt
atcaaagtattcatgagcctgctgtccccaacagcattcagctacgcaagccaatacatt
gcacgatatgaagaacaaggcgttggtcttcagtgggagaacatgtacaaatcccctgtt
caggatgataccacctcatttggctggctgtgctgtctaatcctggcagactctttcatt
tatttctttattgcttggtacgtcaggaatgttttcccagggacatatggcatggcagca
ccatggtattttccggtccttccttcctattggaaagagcgattcggatgcgcagaggtg
aagcatgagaaaagcaatggcctaatgtttactaatatcatgatgcagaacaccaaccct
tctgccaataagacaagtcctgactgtgcatttccctccaacattgaacctgaacctaaa
gatctccaagttggagttgcccttcacggggtcacaaagatctatggctcgaaaacagct
gttgataacctcaatctgaacttctacgaagggcacattacatcactgttggggccaaat
ggagctggcaaaaccacaacaatctctatgctgaccgggctgtttggtgccacagcaggt
accatttttgtatacggaaaagatattaagacagacctgaatactgttcggaaaaacatg
ggggtctgcatgcaacatgacgtcttgttcagttacctcaccaccaaggagcaccttctc
ttgtatggctccatcaaagtccctcactggaccaaaaaacaactccatgaggaggttaaa
aggactttaaaagacactggactgtacagtcatcgccataagagagttggaacattgtca
ggaggaatgaagagaaaattgtccatatccatagctctcatcggtggatcaagggtagtg
attctggatgaaccatccactggcgttgacccatgttctcgccgaagtatatgggatgtc
atatctaagaacaaaactgcaagaacaatcatcctatcaacgcaccacttggatgaggcc
gaagtgctgagtgaccgcattgccttcctggaacagggtggactccggtgctgtggatca
ccattttacctcaaggaagcttttggggatggctaccacctcacactcaccaagaagaag
agtccaaatctagacacaaatacaatctgtgacacagtggccgtgacagcaatgatccag
tcacatctccctgaagcctacctcaaggaggatattgggggagagcttgtatatgtgctc
cctccatttagcaccaaagtctcaggagcttacctgtcactcctgagagcactggacaag
ggtatgggtaaactcaacatcggctgctatggcatttcagacaccactgttgaagaggtc
ttcctaaacttgacaaaagattcacaaaaaagtggtaatatgagtctagagcacttgaca
cagaggaaagttgggaatcccagtgctaatggcatttcaactcctgacgacttgtccgtg
agcagcagcaacttcaccgacagagatgacaaagccctgacaagaagcaagaagctggat
ggctttggactgttactgaagaagataatggctattctcatcaagaggttccaccacacc
cgcaggaactggaaaggtctcgtggctcaggtcattctccccatcgtctttgtagccacg
gccatgggcctcggcacactgagagattccagcaacagttaccccgagatcatgatctct
ccatccatttatggcacctctgaacagacagccttctacgcgaattttgatccagccact
gatggcctggtctcggctctatggaatttccctggcattgacaacgtgtgtttgaatact
agtgactcgcagtgtttaaaaaaagacgatctgggaaagtggaacacaagtggagaagct
atcgacaactttggtgtttgctcctgttcagacaatgtccaggaatgccccaaattcaac
tattctccacctcatagaagaacttactcttcccaagttatttataacctcactggaaaa
cacatggaaaattatctgatatcaaccgcaaatcattttgtacagaaaagatatggaggt
tggagttttgggctgaaattgactaacgaccttcgttttgatgtgacagctgtccctgac
aatagaactcttgctaaggtgtggtatgatccagaaggctaccattccctcccagcttac
ctcaacagcctcaacaacttcctcctgagagttaacatgtcagagtacgatgctgcccga
cacgggatcatcatgtatagccacccttatccgggggtgcaagaccaggaacaagccaca
atcagcagtttaatcgatattttagtggcgctgtccatcctgatgggctactctgtcacc
actgccagctttgtcacctacattgtcagggagcatcagaccaaagccaagcagttgcag
cacatttccggcatcggtgtgacatgctactgggtgacaaatttcatctatgacatggtc
ttctatttggttcctgtagcattttcaattggtgtcatagcaattttcaagctccctgca
ttctacagtggaaacaatctaggcgctgtatccctcctacttttgctgtttggctatgca
acattttcttggatgtacctgctggctggcctcttccatgaaacaggaatggccttcatc
acttatgtgtgtgtcaacctattctttggcatcaattccattgtttccctgtcggtggta
tactttctttccaaggaaaagcctaatgatccgactctagaacttatttctgaaaccctc
aagcgaattttcctgatcttcccccaattctgttttggctacggtttgattgaactttct
cagcaacaggcagtcttggatttcttaaaagcctatggtgtggattatccaagtgagacc
tttgaaatggataagctaggagcaatgtttgtggccttggtttctcagggtaccatgttt
ttcttattgcgactcctcatcaatgagtggctgataaagaagctcagactcttcttcagg
aaatttacatcttctcctatcatggagacagtggatgaagatgaagatgtgcaggctgag
agattaagagttgagagtggtgcagctgagtttgatctggtccagctccatcgtctcaca
aagacctaccagctcatccacaagaagattatagcggtcaacaacatcagcctgggcata
cctgccggagagtgttttggcctccttggtgtgaacggagcagggaaaaccacgatattt
aagatgctgactggagacataattccttccagtggaaacattctgatcagaaacaagagc
ggatccctgggacatgtggattctcacagctctttggttggctactgccctcaggaggat
gccttagatgacctggtaacggtggaagaacacttgtatttctatgccagagtgcatggg
attccagagaaggacatcaaagaaacggttcataaactccttaggaggcttcacttgatg
ccctacaaggacagatctacctccatgtgcagttacggcacaaagaggaagctgtccacg
gcactggccttgatagggaaaccgtccatcctcctgctggatgagccgagctccgggatg
gatcccaagtcaaaacgacacctctggaggatcatttcggaagaggtgcagaacaaatgc
tctgtcatcctcacatctcacagcatggaagaatgtgaagccctttgtacccggctggcc
attatggtgaatggaaggttccagtgcattgggtctctacaacacataaaaagcaggttt
ggacgtggatttactgtcaaggttcacttgaaaaataataaagtgagcatggaaaccctc
acgaagtttatgcagctacactttccaaaaacatacttaaaagatcagcacctgagcatg
ctagagtaccatgtgcccgtcacagcaggaggagtagcaaacatctttgaccttctggaa
accaacaagactgctctaaatatcacaaatttcctcgtgagccagaccactttggaggag
gttttcatcaactttgccaaagaccaaaagtcctacgaaaatgttgataccagtagccaa
ggttccaccataagtgtagactcacaggaagaccagctagactcttag
DBGET
integrated database retrieval system
