Mastomys coucha (southern multimammate mouse): 116088545
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Entry
116088545 CDS
T07224
Symbol
Fn1
Name
(RefSeq) fibronectin isoform X1
KO
K05717
fibronectin 1
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04151
PI3K-Akt signaling pathway
mcoc04510
Focal adhesion
mcoc04512
ECM-receptor interaction
mcoc04810
Regulation of actin cytoskeleton
mcoc04820
Cytoskeleton in muscle cells
mcoc04933
AGE-RAGE signaling pathway in diabetic complications
mcoc05100
Bacterial invasion of epithelial cells
mcoc05135
Yersinia infection
mcoc05146
Amoebiasis
mcoc05165
Human papillomavirus infection
mcoc05200
Pathways in cancer
mcoc05205
Proteoglycans in cancer
mcoc05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
116088545 (Fn1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116088545 (Fn1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116088545 (Fn1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
116088545 (Fn1)
04810 Regulation of actin cytoskeleton
116088545 (Fn1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
116088545 (Fn1)
05205 Proteoglycans in cancer
116088545 (Fn1)
09162 Cancer: specific types
05222 Small cell lung cancer
116088545 (Fn1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
116088545 (Fn1)
09171 Infectious disease: bacterial
05135 Yersinia infection
116088545 (Fn1)
05100 Bacterial invasion of epithelial cells
116088545 (Fn1)
09174 Infectious disease: parasitic
05146 Amoebiasis
116088545 (Fn1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
116088545 (Fn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116088545 (Fn1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mcoc04147
]
116088545 (Fn1)
00536 Glycosaminoglycan binding proteins [BR:
mcoc00536
]
116088545 (Fn1)
04990 Domain-containing proteins not elsewhere classified [BR:
mcoc04990
]
116088545 (Fn1)
Membrane trafficking [BR:
mcoc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
116088545 (Fn1)
Exosome [BR:
mcoc04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
116088545 (Fn1)
Glycosaminoglycan binding proteins [BR:
mcoc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
116088545 (Fn1)
Domain-containing proteins not elsewhere classified [BR:
mcoc04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
116088545 (Fn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
fn1
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
fn2
Fn3_Dep-1_2nd
Interfer-bind
NDNF
FN3_Tor_3rd
DUF4959
Motif
Other DBs
NCBI-GeneID:
116088545
NCBI-ProteinID:
XP_031223716
LinkDB
All DBs
Position
Unknown
AA seq
2477 aa
AA seq
DB search
MLRGPGPRRLLLLAVLCLGTSVRCTEAGKSKRQAQQIVQPQSPVAVSQSKPGCFDNGKHY
QINQQWERTYLGNALVCTCYGGSRGFNCESKPEPEETCFDKYTGNTYKVGDTYERPKDSM
IWDCTCIGAGRGRISCTIANRCHEGGQSYKIGDKWRRPHETGGYMLECLCLGNGKGEWTC
KPIAEKCFDHAAGTSYVVGETWEKPYQGWMMVDCTCLGEGNGRITCTSRNRCNDQDTRTS
YRIGDTWSKKDNRGNLLQCVCTGNGRGEWKCERHALQSASAGSGSFTDVRTAIYQPPTHP
QPAPYGHCVTDSGVVYSVGMQWLKSQGNKQMLCTCLGNGVSCQETAVTQTYGGNSNGEPC
VLPFTYNGRTFYSCTTEGRQDGHLWCSTTSNYEQDQKYSFCTDHAVLVQTRGGNSNGALC
HFPFLYNNQNYTDCTSEGRRDNMKWCGTTQNYDADQKFGFCPMAAHEEICTTNEGVMYRI
GDQWDKQHDLGHMMRCTCVGNGRGEWACIPYSQLRDQCIVDDITYNVNDTFHKRHEEGHM
LNCTCFGQGRGRWKCDPIDQCQDSETRTFYQIGDSWEKFVHGVRYQCYCYGRGIGEWHCQ
PLQTYPGTTGPVQVIITETPSQPNSHPIQWNAPEPSHITKYILRWRPKTSTGRWKEATIP
GHLNSYTIKGLTPGVIYEGQLISIQQYGHREVTRFDFTTSASTPVTSNTVTGETAPFSPV
VATSESVTEITASSFVVSWVSASDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIPDLL
PGRKYIVNVYQISEEGKQSLILSTSQTTAPDAPPDPTVDQVDDTSIVVRWSRPQAPITGY
RIVYSPSVEGSSTELNLPETANSVTLSDLQPGVQYNITIYAVEENQESTPVFIQQETTGT
PRSDNVPPPKDLQFVEVTDVKVTIMWTPPDSAVSGYRVEVLPVNLPGEHGQRLPVNRNTF
AEITGLSPGVTYLFKVFAVHQGRESNPLTAQQITKLDAPTNLQFVNETDRTVLVTWTPPR
ARIAGYRLTTGLTRGGQPKQYNVGPLASKYPLRNLQPGSEYTVTLVAVKGNQQSPKATGV
FTTLQPLRSIPSYNTEVTETTIVITWTPAPRIGFKLGVRPSQGGEAPREVTSDSGSIVVS
GLTPGVEYTYTIQVLRDGQERDAPIVNRVVTPLSPPTNLHLEANPDTGVLTVSWERSTTP
DITGYRITTTPTKGQQGTSLEEVVHADQSSCTFENLNPGLEYNVSVYTVKDDKESVPISD
TVVPEVPQLTDLSFVDITDSSISLRWTPLNSSTIIGYRITVVAAGEGIPIFEDFVDSSVG
YYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVPPPTDLRFTNIGPDTMRVTWAPP
PSIELTNLLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYLVSVSSVYEQHESIPL
RGRQKTGLDSPTGFDSSDITANSFTVHWVAPRAPITGYIIRHHAEHSVGRPRQDRVPPSR
NSITLTNLNPGTEYVVSIIAVNGREESPPLIGQQSTVSDIPRDLEVIASTPTSLLISWEP
PAVSVRYYRITYGETGGNSPVQEFTVPGSKSTATINNIKPGADYTITLYAVTGRGDSPAS
SKPVSINYQTEIDKPSQMQVTDVQDNSISVRWLPSTSPVTGYRVTTTPKNGLGPSKTKTA
SPDQTEMTIEGLQPTVEYVVSVYAQNRNGESQPLVQTAVTNIDRPKGLAFTDVDVDSIKI
AWESPQGQVSRYRVTYSSPEDGIHELFPAPDGEDDTAELQGLRPGSEYTVSVVALHDDME
SQPLIGIQSTAIPAPTNLKFTQVTPTSLTAQWTAPSVQLTGYRVRVTPKEKTGPMKEINL
SPDSSSVIVTGLMVATKYEVSVYALKDTLTSRPAQGVVTTLENVSPPRRARVTDATETTI
TISWRTKTETITGFQVDAIPANGQTPVQRTISPDVRSYTITGLQPGTDYKIHLYTLNDNA
RSSPVIIDASTAIDAPSNLRFLTTTPNSLLVSWQAPRARITGYIIKYEKPGSPPREVVPR
PRPGVTEATITGLEPGTEYTIYVIALKNNQKSEPLIGRKKTDELPQLVTLPHPNLHGPEI
LDVPSTVQKTPFITNPGYDTENGIQLPGTTHQQPSVGQQMIFEEHGFRRTTPPTAATPVR
LRPRPYLPNVDEEVQIGHVPRGDVDYHFYPHVPGLNPNASTGQEALSQTTISWTPFQESS
EYIISCQPVGTDEEPLQFQVPGTSTSATLTGLTRGVTYNIIVEALQNQRRHKVREEVVTV
GNAVSEGLNQPTDDSCFDPYTVSHYAIGEEWERLSDSGFKLTCQCLGFGSGHFRCDSSKW
CHDNGVNYKIGEKWDRQGENGQRMSCTCLGNGKGEFKCDPHEATCYDDGKTYHVGEQWQK
EYLGAICSCTCFGGQRGWRCDNCRRPGAAEPSPDGTPGHTYNQYTQRYHQRTNTNVNCPI
ECFMPLDVQADRDDSRE
NT seq
7434 nt
NT seq
+upstream
nt +downstream
nt
atgctcaggggtccgggaccccggcggctgctgctgctggcagtcctgtgcctggggacg
tcggtgcgctgcacggaagcggggaagagcaagaggcaggctcagcaaatcgtgcagcct
cagtccccggtggctgtcagtcagagcaagcctggctgttttgacaatgggaagcactat
cagataaaccagcagtgggaacggacctacctaggcaacgccctagtctgtacctgctat
ggaggaagccgaggtttcaactgcgagagcaaacctgagcctgaagagacttgttttgac
aaatacactgggaacacttacaaagtgggtgacacttacgagcgccctaaagattccatg
atctgggactgtacttgcatcggggctgggcgaggcaggatcagctgcaccattgcaaat
cgctgccacgaaggggggcagtcctacaagattggtgacaagtggaggaggccacatgag
actggtggctacatgttagagtgtttgtgtctggggaatggaaaaggggaatggacctgc
aaacctatagctgaaaagtgttttgatcatgctgctgggacttcctacgtcgtgggggag
acctgggaaaagccctaccaaggctggatgatggtggactgtacttgtctaggcgaaggc
aatggacgcatcacctgtacctccagaaacagatgcaatgatcaggacacccggacgtcc
tatagaattggagacacgtggagcaagaaggacaaccgaggaaacctgcttcagtgtgtc
tgcacaggcaacggcagaggggagtggaagtgtgagcgacacgctctacagagtgcttca
gccggatctggctccttcacagatgtccgaacagccatttaccaaccgccgactcatcct
cagcccgctccttacggccactgtgtcacagacagtggtgtggtctactctgtgggaatg
cagtggctgaagtctcaagggaacaagcaaatgctgtgcacttgcctgggcaatggagtc
agctgccaggagacagctgtgacccagacttatggtggcaattcaaacggggagccctgt
gtcctcccgttcacctacaacggtaggaccttctattcctgcaccaccgaagggcggcaa
gacggacatctgtggtgtagcacaacttcaaattacgaacaagaccagaagtattctttc
tgcacagaccatgcggttttggttcagactcgaggcggaaattccaacggtgctctgtgc
cacttccccttcctgtacaacaaccagaattacaccgactgtacttctgagggtcggaga
gataacatgaaatggtgcggcaccacccagaactacgatgccgatcagaagtttggattc
tgtccaatggctgcccatgaggagatctgcacaaccaatgaaggggtcatgtaccgcatt
ggggaccagtgggataagcagcatgacctgggccacatgatgaggtgcacgtgtgttggg
aacggtcgtggagaatgggcctgcatcccttactcccagctccgagatcagtgcatcgtt
gatgacattacttacaatgtgaacgacacgttccacaagcgtcacgaggagggacatatg
ctgaactgtacctgcttcggtcagggccggggcagatggaagtgtgaccccattgaccag
tgccaagattcagagacccggacattttatcagattggtgactcctgggagaagtttgtg
catggtgtccgataccagtgttactgctatggccgtggcattggggaatggcactgccag
cctctgcagacctacccaggcacaaccggacctgtccaagtaattatcacagagaccccc
agccagcccaattcccaccccatccagtggaacgccccggagccttcacacatcaccaag
tacattctcagatggagacccaaaacctctactggtcgctggaaggaagcgaccattcca
ggccaccttaactcctataccatcaagggcctgaccccaggtgtgatctatgagggacag
ctcatcagcatccagcagtacgggcacagagaagtgacacgctttgacttcacgaccagc
gccagcacacccgtgaccagcaacacggtgaccggagagactgctcccttttctcctgtt
gtggccacttctgaatccgtaactgagatcacagccagcagctttgtagtctcctgggtc
tcggcttccgacaccgtgtcaggattccgagtggagtatgagctgagcgaggaaggagat
gaaccacagtaccttgatcttccaagcacagccacttccgtgaacatccctgacctgctc
ccgggcagaaagtacattgtcaacgtctatcagatatctgaagagggaaagcagagtttg
atcctttctacgtcacagactacggcacctgacgctcctccagaccctactgtggatcag
gttgatgatacttccattgttgttcgatggagtagaccccaggcacctatcacagggtac
aggattgtctactcaccttcagtagaaggcagtagcacagaactcaacctccctgagacg
gccaactccgtcaccctcagtgacctgcagcccggtgttcagtacaacatcactatctac
gccgtcgaggaaaaccaggagagcactcctgttttcatccaacaagagaccactggcacc
ccaagatctgataatgttccccctccgaaggacctacagtttgtggaagtgacagacgtg
aaagtcaccatcatgtggacccctccagatagtgccgtgtctggataccgtgtggaggtc
ctgcctgtcaacctgcctggggaacatggacagaggctgcctgtcaacaggaacaccttt
gctgaaatcaccgggctgtcccccggggtcacgtacctcttcaaagtctttgctgtgcac
cagggcagggaaagcaaccctctgacagcacaacagatcaccaaactcgacgctcccact
aacctccagtttgtcaacgaaactgacagaacagttctggtaacgtggactccacctcga
gcccgcatcgcaggctaccggctgaccacaggcctgacccgaggaggccagcccaagcag
tacaatgtgggacccttggcctccaagtatcccctgagaaatctgcagcctggttctgag
tacacggtgaccttggtggctgtgaaagggaaccagcagagtcccaaagctactggagtc
tttactaccctgcagcctctgcgctccattccatcttacaacaccgaggtgacagagacc
acaattgtgatcacatggacccctgctccaaggattggcttcaagctgggtgtacgacca
agtcagggaggtgaagcaccccgagaagtgacttcagactcaggaagcatcgttgtgtct
ggcttgactccaggcgtggaatacacttacaccatccaggtcctgagagatggccaggag
agagatgcaccgattgtcaacagagtcgtgacaccgttgtctccacctacgaacttgcac
ctggaagcaaaccccgacaccggagtgcttaccgtctcctgggagaggagcaccacccca
gatattactggctacagaataaccactacccccacgaaagggcagcaagggacctctctg
gaagaagtggttcatgcggatcagagttcctgcacttttgaaaacctgaaccctggcctg
gagtacaatgtcagtgtttacactgtcaaagatgacaaggaaagtgtccctatctctgat
accgtcgtcccagaggtgccccagctcactgacctaagctttgttgatataactgattca
agcatcagcctgaggtggaccccgctaaactcttccaccattatcgggtaccgaatcaca
gtagttgcggcaggagaagggatccctatttttgaagattttgtggactcctcagtagga
tactacacagttacagggctggagcccggcattgactatgacatcagcgttatcactctc
attaatggcggagagagtgcccctactacactgactcagcaaacggctgttcctcctccc
acggatctgcgattcaccaatatcggtccagacactatgcgggtcacttgggccccgcct
ccgtccatcgagctgaccaacctcttggtgcgctactcacccgtaaagaatgaagaggac
gttgccgagttatccatctcaccttcagacaacgccgtggtcctaacaaatctcctgcct
gggacagaatacttagtcagtgtctccagcgtctacgaacaacacgagagcatccctctc
cgaggaaggcagaaaacaggtcttgattccccaactggttttgattcttctgatatcact
gcaaactcattcaccgtccactgggtggctcctcgggcccccatcaccggctacataatc
cgccatcatgccgagcattctgtcggaagacccaggcaagatcgagtgccgccctccagg
aattctatcaccctcaccaaccttaatccgggcactgagtatgttgtcagcatcattgct
gttaatggccgagaggagagccctccactgattggccagcaatccacagtttctgatatt
ccgagggatctggaggtcattgcctccacccccaccagcctgctcatcagttgggaaccc
cctgctgtctctgtgcgctattacagaatcacctatggagagacaggaggaaatagccct
gtccaggagttcactgtgcccggaagcaagtccacagccaccatcaataacattaagcca
ggagcagactacaccatcaccctgtatgctgttactggccgtggggacagtccagcaagc
agcaagccagtttccatcaattatcaaacagaaattgacaagccatcccagatgcaggtg
acggatgtccaggacaacagtatcagtgtccggtggctgccttcaacttctcctgtgaca
ggttacagagtgaccaccactcccaaaaatggcctaggaccatcgaaaactaaaactgcc
agtccagatcaaacagaaatgaccattgaaggtctgcagcccaccgtggagtatgtggtt
agtgtctatgctcagaaccggaacggagaaagccagcccctggttcaaactgcagtaacc
aacattgaccgccctaaaggactggcattcactgatgtggatgtcgattccatcaaaatt
gcttgggaaagcccacaggggcaagtttccaggtacagggtgacctactcgagccctgag
gatggaatccatgagcttttccctgcacctgatggtgaagacgacactgcagagctgcaa
ggcctcagaccgggttctgagtacacagtcagtgtggttgccttgcacgatgatatggag
agccagcccctgattggaatccagtcgacagccatccctgcgccaaccaatctgaagttc
actcaggtgacacccaccagcttgactgcccagtggacagcgcccagtgtccagctcact
ggctaccgagtgcgggtgaccccgaaggagaaaacaggaccaatgaaagaaatcaacctt
tctccggacagctcatcagtgattgtgacagggctcatggtggccaccaagtatgaagtc
agtgtctatgctctcaaggacacactgacaagccgaccagctcagggggtcgtcacaacg
ctggagaatgtcagtcctccaagaagggcccgtgtgacggacgctacagagactaccatc
actattagctggagaacgaagacggagacaatcactggcttccaggtcgatgccatcccc
gccaatgggcagaccccagtccagaggaccatcagcccggatgtcagaagctatactatt
acaggtttacagccaggcactgactacaagatccacctatacactctgaacgacaatgcc
cggagctctcctgtgatcattgacgcctccaccgccattgacgcgccatccaacctgcgg
ttcctgaccaccacacccaactccttgctggtatcatggcaggcaccccgtgccaggatt
actggctacattatcaagtatgagaagcctggatcccctcccagagaagtggtccctcgg
ccccgccctggtgtcacggaggccaccattactggtctggagccaggaaccgagtacacc
atctacgtcattgccctgaagaacaatcagaagagtgagcccctgattgggaggaaaaag
acagatgagcttccccaactggttacccttccacaccccaatcttcatggaccggagatc
ttggatgttccctccacagttcaaaagacccccttcatcaccaaccctgggtatgacacc
gaaaatggtattcagcttcctggcacaacccaccaacaacccagtgttgggcaacaaatg
atctttgaggaacatggctttaggcggaccacgccacccactgcggccaccccggtcagg
cttaggccgagaccatacctgccgaatgtagatgaggaggtccaaatcggtcatgtcccc
agaggagacgtagactaccacttctatcctcatgttccggggctcaatccaaatgcctcc
acaggacaagaagctctttctcagacaaccatctcttggacgccgttccaggagagttct
gagtacatcatttcatgccaacctgttggcaccgacgaagagcccttacagttccaagtt
cctggaacttctaccagtgcaactctgactggccttaccagaggggtcacctacaacatc
atagtggaggcactgcagaaccagaggaggcacaaggttcgggaagaggtggttactgtg
ggcaacgctgtcagcgaaggcctgaaccagcctacggatgactcatgctttgacccttac
acggtttcccattacgccattggagaggaatgggagcggctatctgactctggctttaag
ctcacctgccagtgcttgggctttggcagtggtcatttcagatgcgattcatctaaatgg
tgccatgacaacggtgtcaactacaagatcggagagaagtgggatcggcagggagaaaat
ggccagcggatgagctgcacgtgcctcgggaacggaaagggagaattcaagtgtgatccc
catgaagcaacatgttatgacgacgggaagacctaccacgtaggagaacagtggcagaaa
gagtatcttggagccatttgctcctgcacgtgtttcgggggccagcggggctggcgctgt
gacaactgccgcagacccggggctgctgaacccagtcccgatggcacccctggccacacc
tacaaccagtatacacagagataccatcagagaacgaacaccaacgtaaactgcccaatc
gaatgcttcatgccgttggatgtgcaggctgacagagacgactccagagagtaa
DBGET
integrated database retrieval system
