Mastomys coucha (southern multimammate mouse): 116088551
Help
Entry
116088551 CDS
T07224
Symbol
Smarcal1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcoc03036
]
116088551 (Smarcal1)
Chromosome and associated proteins [BR:
mcoc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116088551 (Smarcal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
116088551
NCBI-ProteinID:
XP_031223757
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MSLPLTEEQRKKIEENRQKALARRAEKSADQPQSTASGSSAAGPSQSKQASLLNLLAGPS
KPAGHAAIFNQQNLNNSFATDQRPHSSHCSQPSPAAEAKGLWKIQGEMSTACPNPNPSPP
EVSNQQLLGYKSSEGHPQAAQDTAASSAGPFPRDPELEAKAVRPSTSGQSISDTFYALGV
KTPRTEGRPPKTLQASSQNASCLRGTCIRTGSRFRVKIGYNQELIAVFKSLPTRRYDPFT
KTWDFSMSDYKALMKAVERLSTVSLKPLEEVGGTVGIQTSLPSAPSLSFVTGRCMLISRA
RFEVDIGYSEVVIGLFKQMESRSYDARTRKWNFLLEEHNKLIARSRELKQVQLDPLPKTV
TLAFASQLEKTSPKLKVDVPEADLSGVDAKLVSNLMPFQREGVSFAISKRGRLLLADDMG
LGKTIQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFLRWLPSLSPENINVVVTGKGRLTA
GLVNIVSFDLLCKLERQLKTPFKVVIIDESHFLKNSKTARCRATVPILKVAKRVILLSGT
PALSRPAELYTQIIAVKPTFFPQFHAFGLRYCDAKRLPWGWDYSGSSNLGELKLLLEEAI
MLRRLKSDVLSQLPAKQRKMVVVNPGRISSRAKAALDAAAKEMTKDKTKQQQKEALLVFF
NRTAEAKIPCVVDYILDLLESGREKFLVFAHHKVILDAVVKELERKNVQHVRIDGSTPSA
DREALCQRFQLSKGHTVAVLSITAANMGLTFSSADLVVFAELFWNPGVLMQAEDRAHRIG
QTNSVAVHYLVAQGTADDYLWPLIQEKIKVLGEAGLSETNLSQMTEAAADYLYKDPEQKT
IYDLFQQSFEDDGNDMEFLQAAESFELGSTSGTSGSGSQDLGDLLDEDEGSPPKKSRFEF
FDNWDSFTSPF
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgccacttacagaggagcagaggaaaaagattgaagagaatcggcaaaaggct
ttggcccgtcgggctgagaagtcagcagatcagccacagagcacagcttcaggctcctct
gctgcggggccatcccagtccaagcaggcctctctcctgaatctcctagcagggccttca
aagccagcaggccatgctgctattttcaatcaacagaatctcaataattcatttgctact
gatcagagacctcacagctcccactgttctcagcccagcccagcagcggaagcaaaggga
ctatggaagatccaaggagagatgtccacagcctgcccaaaccctaaccccagtcctcca
gaagtctctaaccaacagcttttgggttataaatccagtgagggacatccccaagcagcc
caggatacagcagcttcctctgctggcccatttcccagggatcctgagttagaggccaag
gcagtgaggccttccacctctgggcagagcatttcggacaccttttatgccttaggggtg
aaaacacctaggacagaagggagacctccaaaaacactgcaagcctcatcccaaaacgca
agctgtctacggggaacgtgcataaggactgggagtcgcttccgggtaaagatcggctac
aaccaagagctcattgccgtgtttaagtctctgcccaccaggcgctatgatccttttaca
aaaacctgggacttcagcatgagcgactacaaagccttgatgaaggcagttgagcggctc
tccacggtctccctgaagccattggaagaggttggtggcactgttgggattcagaccagc
cttccctcagctccatccctttcctttgtgacagggagatgcatgctcatctcccgagcc
cgctttgaggtcgacatcggctattcggaggtggtgattggcctgtttaaacagatggag
tccaggagttacgatgccaggaccaggaagtggaactttctcttggaagagcacaacaaa
ctaattgcaaggtcacgtgaactcaagcaagttcagctggaccctctgcccaagacagtg
accctggcatttgcctctcagctggagaaaacgtctcccaaactgaaagtagacgtgcca
gaagctgacctttctggagtggatgccaagcttgtgtctaacctcatgccctttcagaga
gagggagttagctttgccatatcaaaaagaggccgcctgctacttgccgatgacatgggc
ctagggaagaccatccaagccatctgcatagcagctttttaccgaaaggagtggccactg
ctggtggtcgtaccttcctctgtgcgcttcacctgggagcaggcctttcttcggtggctt
ccatctcttagcccagagaacatcaacgtggtggtgaccgggaagggccgcctaacagct
ggcttggtcaacattgtcagctttgaccttctttgcaagttggagaggcagctgaaaacc
ccttttaaagtcgtcattattgatgaatcacacttcctcaaaaacagtaagactgcccgc
tgccgagccactgtgcctatcctaaaggttgccaagagggtgatcctgctgtcgggcaca
cctgccctgtctcggcctgcagagctctacacacagatcattgctgtcaagccaaccttc
ttccctcagtttcatgcctttggacttcgctactgtgatgccaagcggctcccttggggc
tgggattactcaggctcctccaacctgggtgagctgaagctgctgctagaggaggcaatc
atgctgcggcggctcaaatcggacgtgctttcccagcttccagccaagcaacgcaagatg
gtggtggtcaaccctggtcggatcagctccagggctaaggcagccctggatgcagcagcc
aaagaaatgaccaaggacaaaactaagcagcagcagaaggaagctctccttgtcttcttc
aacagaacggcagaagctaaaatcccgtgtgtcgttgactacatcctggacctgctggag
agcggacgagagaagtttctagtgtttgcacaccataaggtgattctggatgcagttgtt
aaggaacttgagaggaagaacgttcagcacgtccggattgatggctccaccccctcagca
gaccgggaggctctgtgccagcggttccagctgtccaaagggcacacagtagcagtgctg
tccatcacagctgccaacatgggcctcaccttctcctcagctgatctggtggtgtttgct
gagctgttctggaacccaggggtgctgatgcaggctgaggaccgtgcccaccgcattgga
cagacaaactctgtggccgtccactacctagtggcacaaggcacagcagatgactacctt
tggcctctgattcaagagaagattaaagttctgggggaagctgggctttctgagaccaat
ctctcgcaaatgacggaagctgcggcggactacctctacaaggacccagagcagaagacg
atctacgacctgttccagcagtcctttgaagacgatggaaatgacatggaattcctgcaa
gcagcagagtcctttgaactaggaagtacttcaggcacctctggaagcggttcccaggat
ctgggagatctcttagatgaagatgaaggcagtccaccaaagaaaagcagatttgaattc
tttgataactgggacagctttacctctcccttttga
DBGET
integrated database retrieval system
