Mastomys coucha (southern multimammate mouse): 116088627
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Entry
116088627 CDS
T07224
Symbol
Farsb
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit isoform X1
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
116088627 (Farsb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mcoc01007
]
116088627 (Farsb)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mcoc03016
]
116088627 (Farsb)
Enzymes [BR:
mcoc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
116088627 (Farsb)
Amino acid related enzymes [BR:
mcoc01007
]
Aminoacyl-tRNA synthetase
Class II (U)
116088627 (Farsb)
Transfer RNA biogenesis [BR:
mcoc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
116088627 (Farsb)
Prokaryotic type
116088627 (Farsb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
Motif
Other DBs
NCBI-GeneID:
116088627
NCBI-ProteinID:
XP_031223981
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MPTVSVKRDLLFQALGRTYTDEEFDELCFEFGLELDEITSEKQIISKEQGNVKAQGASDV
VLYKIDVPANRYDLLCLEGLARGLQVFKERIKAPVYKRVMPKGEIQKLIITEETAKVRPF
AVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRTLVAIGTHDLDTLSGPFTYTAKRPSD
IKFKPLNKTKEYTACELMNIYKTDNHLKHYLHIIESKPLYPVIYDSNGVVLSMPPIINGN
HSKITVNTRNIFIECTGTDFTKAKIVLDIIVTMFSEHCEHQFTVEAVEVVSPNGKSSTFP
ELPYRKEMVRADLINKKVGIRETPANLAKLLTRMCLKSEVIGDSNQIEVEIPPTRADVIH
ACDIIEDAAIAYGYNNIQMTLPKTYTIANQFPLNKLTELLRLDMAAAGFTEALTFALCSQ
EDIADKLGLDISATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISDI
VVKDSSKDVGAKNYRHLCAVYYNKNPGFEIIHGLLDRIMQLLDVPPGEESGGYVIKASAG
SAFFPGRCAEIFVGGQSIGKLGVLHPDVITKFELTMPCSSLEINIEPFL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgtcagcgtgaagcgagacctgctgttccaagccctgggccggacttacact
gatgaagaatttgacgaactgtgttttgaatttggtctggaacttgatgaaattacttct
gagaagcaaatcataagcaaggaacaaggtaatgtgaaggcacagggggcctcggatgtt
gtgctttataagattgatgtccctgccaacagatatgatctcctgtgtctggaaggattg
gctcggggactccaagtcttcaaagaaaggataaaagctccagtatataaacgagtaatg
cctaagggagagatccaaaagctgattatcaccgaagagacagctaaagtgcgccctttc
gctgtagctgcagttctccggaatatcaagtttactaaagaccgatatgacagcttcatc
gaacttcaggagaaactacaccagaatatttgcaggaaaagaacattggttgctattgga
actcacgacttggacactctatcaggcccatttacttacactgcgaaacgtccttcagat
atcaaattcaagcctctgaataagaccaaggagtatacagcttgtgaactaatgaacata
tacaagactgacaatcaccttaaacattatttacatatcattgaaagtaagcccctgtat
ccagttatctatgacagcaatggtgtggtcctgtcgatgcctccaattataaatgggaat
cattcaaaaataacagtaaatactaggaatatatttattgaatgcacagggactgacttc
actaaggcaaaaatcgtgcttgacatcattgtcaccatgttcagtgaacactgtgaacat
cagtttacagttgaagcagttgaagtagtttcccctaatggaaaatcaagtacatttcca
gagctgccttacagaaaggagatggtgagagctgatttaattaacaagaaagttggaatc
agagaaactcctgcaaatcttgccaagctcctgaccaggatgtgtctgaagtcagaagtc
ataggtgacagcaatcagattgaggtggaaatacctccaaccagagcagatgtcatccat
gcatgtgacatcatagaggatgcagctattgcttatggctataacaacattcagatgact
ttgccgaaaacatacaccatagctaatcaatttcctctcaacaagctcacagagctcctc
agacttgacatggctgccgctggcttcaccgaagcactgacttttgctctgtgctcccaa
gaagatattgctgataaacttggcctggatatctctgcaacaaaggcagtccacataagt
aatcccaagactgctgagttccaggtggcgcgcactacccttcttcctggccttctgaag
accattgcagcaaaccggaagatgccccttcctctcaaactgtttgaaatctctgacatt
gtagtaaaagattctagcaaagatgtaggtgcgaaaaactacaggcatctctgtgctgtt
tattacaacaagaatcctgggtttgagatcatccatggcttgctggacagaattatgcag
ctgcttgatgtgcctcccggtgaggaaagcgggggctacgtgatcaaagcatctgcaggt
tctgcattcttccctggacggtgtgctgagatctttgtcgggggtcagagcattgggaag
ctgggtgtccttcatcctgatgttatcaccaaatttgagctgaccatgccctgttcctct
ctggagatcaatattgagccctttttatga
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