KEGG   Mastomys coucha (southern multimammate mouse): 116088650
Entry
116088650         CDS       T07224                                 
Symbol
Col4a3
Name
(RefSeq) collagen alpha-3(IV) chain isoform X1
  KO
K06237  collagen type IV alpha
Organism
mcoc  Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04151  PI3K-Akt signaling pathway
mcoc04382  Cornified envelope formation
mcoc04510  Focal adhesion
mcoc04512  ECM-receptor interaction
mcoc04518  Integrin signaling
mcoc04820  Cytoskeleton in muscle cells
mcoc04926  Relaxin signaling pathway
mcoc04933  AGE-RAGE signaling pathway in diabetic complications
mcoc04974  Protein digestion and absorption
mcoc05146  Amoebiasis
mcoc05165  Human papillomavirus infection
mcoc05200  Pathways in cancer
mcoc05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:mcoc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    116088650 (Col4a3)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    116088650 (Col4a3)
   04518 Integrin signaling
    116088650 (Col4a3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    116088650 (Col4a3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    116088650 (Col4a3)
 09150 Organismal Systems
  09152 Endocrine system
   04926 Relaxin signaling pathway
    116088650 (Col4a3)
  09154 Digestive system
   04974 Protein digestion and absorption
    116088650 (Col4a3)
  09158 Development and regeneration
   04382 Cornified envelope formation
    116088650 (Col4a3)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    116088650 (Col4a3)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    116088650 (Col4a3)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    116088650 (Col4a3)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    116088650 (Col4a3)
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    116088650 (Col4a3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mcoc04147]
    116088650 (Col4a3)
   00536 Glycosaminoglycan binding proteins [BR:mcoc00536]
    116088650 (Col4a3)
Exosome [BR:mcoc04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   116088650 (Col4a3)
Glycosaminoglycan binding proteins [BR:mcoc00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   116088650 (Col4a3)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 116088650
NCBI-ProteinID: XP_031224034
LinkDB
Position
Unknown
AA seq 1670 aa
MHSEMAPRFLVLLLPILLLLLAAPPVASKGCICKGKGQCLCVGTKGEKGEKGFPGPPGFP
GQKGFPGPEGLPGPQGPKGASGLPGLTGPKGIRGITGLPGFAGPPGLPGIPGHPGPHGLA
GLPGCNGSKGEQGFPGIPGTPGYAGLPGPDGLKGQKGEPAQGEDREFNGKGDPGPPGAPG
FQGFPGLPGFPGPAGPPGPPGFFGFPGAMGPSGPKGRMGDNMIGQKGERGVKGLTGPPGP
PGTVIFTLTRPYNKSDFKGEKGDAGERGGPGHPGPPGPPGDSYGSEKGAPGEPGPRGKPG
KDGAPGFPGTEGAKGSRGFPGLRGEAGIKGWKGDIGPPGFPGPTEYYDAYLEKGDKGMPG
PPGPKGTRGPQGPRGPPGVPGSPGLSRPGLRGPPGWPGLKGRKGERGPPGKDTMGPPGPL
GCPGSPGPPGPPGPPGRPGDIVFQPGPPGEHGAPGNIGPPGFPGVDGPKGEPGSPCTECH
CFPGPPGVPGFPGLDGVKGIPGRRGVPGMKGNPGSPGSAGLPGFAGFPGDQGHPGLKGDK
GDTPLPWGQVGDPGDPGLRGLPGRKGFDGIPGGPGAKGTPGPRGEPALSGRKGDQGPPGP
PGSPGPPGPAGPAGPPGYGPQGEPGPKGAQGVAGAPGPPGEAGLKGEPSTSIPVLGPPGP
PGPPGRAGLRGLPGLPGPVGKCDPGLPGPDGEPGIPEAGFPGPPGPKGDQGFPGTKGSPG
CPGEMGKPGRPGEPGVPGAKGEPSVGRPGEPGKPGFPGERGDSGENGDIGLPGLPGIPGT
PGRDGLDGPPGDPGQSGPPGAKGPPGRCIPGPRGTQGLPGLNGLKGQPGRRGDTGPKGDP
GIPGMDRSGVRGDPGLPGMPGHPGEMGPPGQKGYPGAPGFPGPPGEKGEVGMMGYPGTTG
PPGLPGTPGSQGQRGSLGIPGIKGERGLPGAKGERGEKGKPGPSQAPHLKGDKGDPGLKG
FVGNPGEKGNRGNPGIPGPKGLEGLPGLPGPPGPRGYPGSRGNPGRPGPPGMPGSMGNMG
VPGPKGRKGTSGLPGLTGRPGLPGIHGLQGEKGEPGYSEGARPGPPGPKGDPGLPGDKGK
KGERGLPGPPGQPGPAGPDGAPGSPGSPGHPGKPGPDGDLGLKGQKGFPGPPGSTGPPGP
PGLPGLPGPMGMRGDQGRDGIPGPPGEKGETGLLGGYPGPKGSPGVPGAKGDRGVPGLSG
LPGRKGAMGDVGPQGPPGAAGLPGSPGLPGAIVPGPKGNRGLPGLRGNPGEPGPPGPPGP
VGKGIKGDKGFMGPPGPKGLPGTVGDMGPPGHPGAPGTPGLPGVRGDPGFPGFPGIKGEK
GSPGFLGPIGHPGPVGPKGPPGPRGKPGTLKVISLPGSPGPPGAPGQPGMKGDPGPLGPP
GIPGPCGPRGKPGKDGKPGTPGPAGAKGDKGSKGQQGPPGLDGLPGLKGKPGDRGTSATG
TRMRGFIFTRHSQTTANPSCPEGTQPLYSGFSLLFVQGNEHAHGQDLGTLGSCLQRFTTM
PFLFCNINNVCNFASRNDYSYWLSTPALMPMDMAPITGRALEPYISRCTVCEGPAMAIAV
HSQTTAIPPCPQDWVSLWKGFSFIMFTSAGSEGAGQALASPGSCLEEFRASPFIECHGRG
TCNYYSNSYSFWLASLNPERMFRKPIPSTVKAGDLEKIISRCQVCMKKRH
NT seq 5013 nt   +upstreamnt  +downstreamnt
atgcactccgagatggctccaaggttcctggtgctcctgctgcctatcctgctgttactc
ctggctgccccgcctgtggctagcaagggctgtatctgtaagggcaaaggacaatgcctc
tgcgtgggcaccaaaggggagaagggggagaaaggctttcctgggccccctggatttcct
ggccagaaaggatttccaggtcccgaaggcttgcctggaccacagggacccaagggtgcc
tcaggacttccaggactcactggccccaaaggcatcaggggaataactggattaccaggg
tttgcaggtcctcctggacttccaggcatcccaggccaccctgggcctcatgggctggct
ggtttaccaggatgcaacgggtctaagggtgaacaaggattcccaggcattccgggcaca
ccaggctatgcagggctcccaggtcctgatggcttgaaaggacaaaagggtgagcctgct
caaggagaagacagggaattcaatggaaaaggtgaccctgggcctccaggagctccaggc
ttccagggttttccaggactcccaggttttccagggcctgccggaccaccaggtcctccg
ggattttttggttttccaggagcgatgggacccagcggacccaaaggtcgtatgggcgat
aacatgataggacaaaaaggagaaaggggtgtgaaaggattaacaggacctcctgggcca
ccaggaacagtaatttttacactcacccgcccatacaacaaatcggacttcaagggagag
aaaggagatgcgggagagaggggtggacctggacatcctggacccccggggccacctgga
gactcctatggatcagaaaagggtgcgcctggagagcctggtcctcggggaaaacctgga
aaagatggtgctcctggcttccctggcactgagggagccaagggcagcaggggctttcct
gggttgaggggtgaagccggcattaagggatggaaaggagacattggccctcctggattt
cctggtccaacagaatattacgatgcatacctggaaaagggagataaaggaatgccaggc
ccgcctgggcccaaaggcacccgtggtccacagggtcccagaggtccccctggagttcct
ggaagtcctggactgtcaaggcctggcctcagaggacctcccggttggccaggcttaaaa
gggcgtaaaggggagagaggaccccccggaaaagacactatgggccctcctggacccctg
ggatgtcctggctcaccaggtccaccaggccccccaggacctccaggacgtccaggtgac
attgtttttcagccaggtcctcctggtgagcatggagcaccaggcaatatcggacctcca
gggtttccaggagttgatggacccaaaggagaaccaggcagtccatgcaccgagtgtcac
tgcttcccaggcccccctggagtcccaggatttccaggattagatggtgtcaaaggaatc
ccaggaagacgaggtgtgcctggcatgaagggaaacccagggtccccaggaagtgcaggt
ctcccaggatttgcaggattcccaggtgaccaagggcatccaggacttaaaggggacaaa
ggggacacacctctaccgtgggggcaagtgggtgacccaggtgatcctggactcagaggc
ctgcctgggagaaagggcttcgatggaattcctggaggtccaggagcaaaaggaacacca
ggacctagaggagaaccggccctgagtggaaggaaaggggaccagggacctccaggacct
cctggatcccctggacccccaggacctgcaggaccagctggaccaccgggctatggaccc
caaggagagccaggtccaaagggagcccagggagtcgctggagccccgggaccacccgga
gaagccggccttaaaggagaacccagcacatcaattccagttctagggcccccaggccct
ccagggccccctggtcgggctggccttagaggtctacctggtttgcccggacctgtggga
aaatgtgatcctggtcttcctggacctgatggtgaaccaggaattccagaagctggattc
ccagggcctccaggacctaagggagaccaaggtttcccagggacaaaaggatcacctggt
tgtcctggggaaatgggaaagcctggccgtcctggagagccaggtgtccccggagccaag
ggagaaccatcagtaggcaggcctggggaaccgggaaaaccaggctttccaggagaaaga
ggcgattctggggaaaatggagatattggactccccgggcttccaggcatccctggaact
ccaggcagagacgggcttgatgggcctccaggagacccaggacagtctggaccacctgga
gcaaaaggacccccagggagatgcataccaggacccaggggcacccaaggacttccaggc
ttgaatggattgaaagggcaaccaggtagaagaggtgataccgggccaaagggagaccct
ggcatcccaggcatggacaggtctggagtccgtggagaccctggactaccaggaatgcca
ggtcatccgggtgagatgggcccacctggccaaaagggatacccgggagctccaggattc
ccagggccaccaggcgagaaaggagaagttggaatgatgggctatcctgggaccactggc
cctccggggcttcctgggacaccaggctcacaagggcagagaggtagccttggaatccca
ggaataaaaggggaaagaggactccctggagccaaaggggaacgaggcgagaagggcaag
cctgggccttcccaagctccacacttaaagggagacaaaggagaccctggacttaaagga
tttgtaggaaatccaggtgaaaaaggaaacagaggcaatccagggataccaggtccgaaa
ggcctagaggggttgcctgggctaccaggccctccaggccctaggggatatcccgggagc
aggggaaatcctggaagaccaggaccacccggcatgccaggaagcatggggaacatgggg
gtgccaggccctaaagggagaaaaggaacttcaggacttccaggtctcactgggagacca
ggcctgccagggatccatggtctccaaggagagaagggggagccaggttattcagaaggt
gcaaggccaggaccaccaggaccaaagggcgatccaggattgccaggtgacaaaggaaaa
aaaggagagagaggtctacctgggccacctggacaacctgggcctgctggacctgacgga
gcccctgggagtcctgggagtcctggccacccaggaaaaccaggtcctgatggtgatttg
ggtcttaaaggacagaaaggcttcccgggccctccaggaagcactggccctccaggccct
ccaggactcccagggcttcctgggccaatgggtatgagaggtgatcaaggacgtgatgga
attcctggtcctccgggagagaagggagaaacgggcttgctggggggctacccaggccca
aaagggagccctggtgtaccaggtgccaaaggagacaggggagttccaggcctgtctggc
cttcctggcagaaagggggccatgggagatgttgggccccaaggacccccaggagctgct
ggactcccaggatcaccaggtctccctggggcaattgtccctggcccgaaaggaaacaga
ggtctccccggcttaagaggaaatccaggtgagccaggtcccccaggacctccaggacct
gtcgggaaaggcataaaaggtgacaaaggatttatgggcccacctggccccaaaggtctg
cctggaactgtaggggacatgggcccaccaggtcacccgggagcaccaggtacccccggt
cttcctggtgtcagaggtgatccaggattccccggatttccaggcataaaaggagaaaag
ggtagtcccggatttcttgggccaattggacatccaggaccagttgggccaaaaggacca
ccaggtccacgtggaaaacctggtacacttaaggtcatctcgcttccgggaagcccaggg
ccacctggtgcacctggacagccaggaatgaaaggagaccctggacccctgggaccaccg
ggaatcccaggaccctgtgggccaagaggtaaaccaggcaaggatgggaagccaggaact
ccaggaccagctggtgcaaagggcgacaagggctcgaaaggacagcaaggcccacctggt
ctggatggattgccaggtttaaagggaaaacctggcgacaggggaacatcggccactgga
acaagaatgcgaggcttcatctttacccgacacagtcaaaccacagccaatccttcatgt
cctgaaggaacacagccactctatagtgggttttctcttctttttgtacaaggaaacgaa
catgcacatggacaagaccttggtactctgggcagctgcctgcagcgattcaccacaatg
ccattcttattctgtaacatcaataatgtatgtaactttgcatcacgaaatgattattct
tactggctgtcaacaccggctctgatgccaatggacatggctccaattactggtagagct
ctcgaaccctatattagcagatgcaccgtctgtgaaggtcctgcaatggccatagccgtt
cacagtcaaactactgctatccctccatgtccccaggactgggtttctctctggaaaggt
ttttcttttattatgttcacaagtgcaggctctgagggggctggacaagcacttgcctca
cccggctcctgtctggaggaattccgagccagtccatttatagaatgccatggacgaggg
acatgtaactactactcaaactcctacagtttctggctggcttcactaaacccagaaaga
atgttcagaaagcctattccatcaaccgtgaaagctggagacttagagaaaatcataagc
cgttgtcaggtgtgcatgaagaaaagacattga

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