Mastomys coucha (southern multimammate mouse): 116088669
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Entry
116088669 CDS
T07224
Symbol
Trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116088669 (Trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcoc04121
]
116088669 (Trip12)
Enzymes [BR:
mcoc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
116088669 (Trip12)
Ubiquitin system [BR:
mcoc04121
]
Ubiquitin ligases (E3)
HECT type E3
116088669 (Trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
UNC45-central
HEAT_2
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
116088669
NCBI-ProteinID:
XP_031224062
LinkDB
All DBs
Position
Unknown
AA seq
2068 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDSIGGRSHLGQAKRKGFIPPESRKSNFKAPKVQ
SNTTSELSRGHLSKRSCSSSSAVIVPQPEDPDKANTSERQKTGQVPKKDNSRGVKRSASP
DYNRTNSPSSAKKPRAFQHIESLSETNKPHSKSKKRHLDQEQQLKSAQLPSTSKAHTRKS
VAAGSSRSQKRKRTESSCVKSGSGSESTGAEERSAKPTKLASKSATSAKAGCSTITDSSS
PASTSSSSSAVAPAPSTVPAGARVKQGKDQNKARRSRSASSPSPRRSSREKEQSKTGGSS
KFDWAARFSPKVSLPKTKLSLPGSSKSEASKPGPSGLQAKLASLRKSTKKRSESPPAELP
SLRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPESNQETVNSSAARTDEAPQ
GAAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIG
SGASSKAQQLLQGLQASDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQME
HNFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRR
HSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLT
HQDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNVQQLLVVTPPILSSGMFIMVV
RMFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSLIC
ELMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEVAAHQVGE
DEISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNTSGYSELKKDDARAQLM
KEDPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVS
SHIASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKHLAESESLLTSPP
KACTNGSGSLGTTTPASSGSATAATNASADLGSPSLQHSRDDSLDLSPQGRLSDVLKRKR
LPKRGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGRLSAQSNSNNIEP
ARTAGVSGLARAASKDTISNNREKIKGWIKDQAHKFVERYFSSENMDGSNPALNVLQRLC
AATEQLNLQVDGGAECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKSEKDAVSREI
RLKRFLHVFFSSPLPGEEPVGRVEPVGHAPLLALVHKMNNCLSQMEQFPVKVHDFPSGNG
AGGSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLVV
RGYGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGEHLLPYNMTVYQAVR
QFSVQAEDERESTDDESNPLGRAGIWTKTHTIWYKPVREDEESTKDCVGGKRGRAQTAPT
KTSPRNAKKHDELWHDGVCPSVANPLEVYLIPTPPENITFEDPSLDVILLLRVLHAISRY
WYYLYDNAMCKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPF
DTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNREELLKQAES
VMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLSNPKGSQ
EGTKYIQNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYK
WMLRQETSLTSHDLFDIDPVVARSVYHLEDIVRQKKRLEQDKSQTKESLQYALETLTMNG
CSVEDLGLDFTLPGFPNIELKKGGKDIPVTIHNLEEYLRLVIFWALNEGVCRQFDSFRDG
FESVFPLSHLQYFYPEELDQLLCGSKADTWDAKTLMECCRPDHGYTHDSRAVKFLFEILS
SFDNEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLK
LPDYSSIEIMRDKLLIAAREGQQSFHLS
NT seq
6207 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gccggggcccaaccacaagacgactcaataggaggaaggtcacatttagggcaggcaaaa
cgtaagggatttatccctcctgagagtagaaaatctaattttaaggcacccaaagtgcaa
tctaatactacttctgaactgtcaaggggacacctttctaaaagaagctgcagttcatca
tctgctgtcatagttccacaaccagaggatccagacaaagccaatacttcagaaaggcag
aaaacggggcaggtgcctaaaaaagacaattctcgaggagtgaaacgcagtgctagtcca
gactacaacaggaccaactctcctagctctgcgaaaaagcccagagcatttcagcatatt
gagtctctctcagaaaccaataagccacatagtaagtcaaagaagagacatttagaccag
gagcaacaactgaaatctgcacaattgccgtcaacaagtaaggctcacaccagaaagagt
gtggctgctggtagttcacggagtcagaaaagaaagaggacagagagttcttgtgttaag
agtggttctgggtccgaatcaactggtgccgaagagagatctgcaaaacccaccaagctg
gcttcaaaatcggccacctcagccaaagctgggtgtagcaccatcactgattcttcttct
cctgcctctacttcctcctcatcttcagctgtagccccggccccttcgactgtaccagca
ggtgccagggtgaaacaaggaaaagaccagaacaaggccaggcgttcccgttctgcatcc
agccccagtcccagaagaagtagcagggaaaaggaacagagtaaaactggtggctcttca
aaatttgattgggctgctcgcttcagccccaaagttagcctacctaaaacaaaactgtct
cttccagggtcttctaagtcagaggcatcaaaacctggaccttcaggattacaggccaaa
ttagcaagtttaagaaagtctaccaagaagcgcagtgagtccccacctgctgagctcccc
agtttgaggaggagcacacgccaaaagaccacgggctcctgtgctagtaccagtcggcga
ggctctggcctgggcaagagaggagcagctgaggcccggcggcaagagaaaatggcagac
cctgaaagcaaccaggagacagtaaattcctcagctgcccggacagatgaagctccccaa
ggagctgcagcctctagttctgttgcaggggctgttggcatgaccacctctggggagagt
gaatcggatgattctgagatgggacgattacaagctctgttagaggccaggggtcttcct
cctcacctgtttggtcctctcggtcctcggatgtcacaacttttccatagaacgattgga
agtggagctagttctaaggcccagcagcttcttcaaggactacaagccagtgatgaaagc
caacagcttcaggcagtcattgaaatgtgtcagctattggtcatgggcaatgaggagaca
ctaggagggtttcctgtgaagagtgttgttccagctttgataacattactgcagatggaa
cataattttgacattatgaatcatgcttgccgagccttaacatacatgatggaagcgctc
cctcggtcatctgctgttgtagttgatgctatccctgttttcttagaaaagctgcaagtt
attcagtgtattgatgtggcagagcaggccttgactgccttggagatgttgtcacggcga
cacagtaaagccatcttacaggcgggtggtttggcagactgcttgttatatctagaattc
ttcagcataaatgcccaaagaaatgcactagcaattgcagcgaattgctgccagagtatc
acaccagatgaatttcattttgtggcagattctctaccattgcttacccaaaggctaact
catcaggacaaaaagtcagtagaaagcacttgcctttgttttgcacgtttagtggacaac
tttcaacatgaggagaacttactgcaacaggttgcttccaaagatctacttacaaatgtt
caacaattgttggtagtgactccaccgattttaagttctgggatgtttattatggtggtt
cgcatgttttctctgatgtgttccaactgtccaacattagctgttcaacttatgaaacaa
aacattgcagaaacacttcacttcctcctatgtggtgcctccaatggaagttgtcaagag
cagattgatcttgtcccacgaagccctcaagaactgtatgaactgacgtctttgatttgt
gaacttatgccatgtttaccaaaagaaggcatctttgcagttgataccatgttgaaaaag
ggaaatgcgcagaacacagatggtgcaatatggcagtggcgggatgaccgaggcctctgg
catccctataacaggatcgacagccggatcattgaggtagcagcccatcaggtcggtgag
gatgagataagcttgtccactctgggacgagtttatactattgattttaattctatgcag
caaatcaatgaggacacgggaacagcacgtgccattcagagaaaacctaaccccttagcc
aatactaacactagtggatattcagagttaaagaaggatgatgctcgagcacagctaatg
aaagaagatccggaactggctaagtctttcattaagaccttatttggtgttctctatgaa
gtatatagctcctcagcaggacctgcggtcagacataagtgccttagagcaattcttagg
ataatttattttgctgatgctgaacttctcaaggatgttctgaaaaatcatgctgtttca
agtcacattgcttccatgctatcaagccaagacctgaagatagtagttggagctcttcag
atggcagaaatcctaatgcaaaagttacctgatatttttagtgtttacttcaggagagaa
ggtgtgatgcatcaagtaaaacatttagcagaatcagagtctttgttgacaagtccccca
aaggcatgtacaaatgggtcaggatccctggggactacaacaccagccagcagtgggagt
gccacggcagcaaccaatgcctctgctgatctagggtcacctagcttgcagcatagcaga
gatgattctttggatctgagccctcaaggtcgattaagtgatgttctcaagagaaaacga
ctgccaaaacgagggccaagaaggccaaaatattcccccccaagagatgatgacaaagta
gacaatcaagctaaaagccccaccactactcagtcacctaaatcctccttcctggccagc
ttgaatccaaaaacatggggaaggctaagcgcacagtccaacagcaacaacatcgaacca
gcgcggactgcaggagttagtggtcttgccagggcagcctcaaaagacaccatatccaat
aatagagaaaaaattaaaggctggattaaggatcaggcacataaatttgttgagcgttat
tttagttctgagaatatggatggaagcaaccctgccctgaatgtccttcagagactttgt
gctgcaactgaacaactcaacctccaggtggatggtggagctgagtgccttgtagaaatc
cgtagcattgtctcagagtcagatgtttcgtcatttgaaatccaacatagtgggtttgtg
aaacaactgttgctgtatttgacatctaagagtgaaaaggatgctgtcagcagagagatc
cggttaaagcgtttccttcatgtatttttttcttctccacttcctggagaagagcctgtt
ggaagagtagaaccagtgggccatgcccctttgttagcattggtccacaagatgaacaac
tgtcttagccaaatggagcagtttccagtcaaagtgcatgatttccctagtggaaatgga
gctggaggcagcttttctcttaacagaggatcacaagctttaaaatttttcaacacacat
cagttaaaatgtcaattacaaagacacccagactgtgcaaatgtgaagcagtggaaaggc
gggcctgtcaagattgatcccctggctctggtgcaagctattgagagataccttgtggtt
agaggatatggaagagtaagagaagatgatgaagacagtgatgatgatgggtcagatgaa
gaaatagatgagtctctggctgctcaattcttaaattcgggaaatgtaaggcacaggcta
cagttttatattggagaacatttactaccatataacatgaccgtgtatcaggcagtccgc
cagttcagtgtacaggctgaagatgaaagagaatctactgatgatgagagcaatcctctg
ggaagagctggaatttggacaaagactcatacaatatggtacaaacctgtgagggaggac
gaagaaagtactaaagattgtgttggtggcaaaagggggagagcccaaacagctccaaca
aaaacttcccccagaaatgcaaagaagcacgatgagttatggcatgatggagtgtgcccg
tcagtagcaaatcctttagaagtttacctcattcccacgccacctgaaaatatcaccttt
gaagacccatccttagatgtgatactactattaagagttttacatgccatcagtcgatat
tggtattacttatatgataatgcgatgtgcaaggagattattccaactagtgaatttatt
aacagtaaattaacagcaaaagcgaataggcagcttcaagatcctctagtgatcatgaca
ggaaacatcccaacatggctcaccgagctaggaaagacctgcccttttttctttcctttt
gatacccgacaaatgcttttttatgtaactgcatttgatcgggaccgggccatgcaaaga
ttacttgataccaacccagaaatcaaccaatctgattctcaagacagcagagttgcacct
agattggatagaaaaaaacgtactgtgaacagagaggagctactaaaacaagccgagtct
gtgatgcaggaccttggcagctctcgggccatgttagaaatccagtatgaaaatgaggtt
ggtacaggtctggggccaacactggagttttatgcacttgtttctcaggaactacagaga
gctgacttgggtctctggagaggtgaagaagtaactcttagcaatccaaaaggaagccaa
gaagggaccaagtatattcaaaacctccagggcctgtttgcacttccctttggtaggaca
gctaagccagctcacatcgcgaaggttaagatgaaatttcgcttcttaggaaaattaatg
gctaaggctatcatggatttcagattggtggatcttccacttggcctgcccttttataag
tggatgctacgccaggaaacttcattgacatctcatgatttgtttgacattgatcctgtt
gtagccagatcagtatatcacctagaagacattgtcagacagaagaaaagactggagcag
gataaatcccagaccaaagagagtctacagtatgccttggaaactcttacaatgaatggc
tgctcagtggaagatctgggattggattttacgctgcctgggtttcccaatattgaattg
aagaaaggagggaaggatattccagttactatccacaatttggaagaatacctaagattg
gtgatattctgggcactaaatgaaggtgtttgtcggcagtttgactcattcagagatgga
tttgaatcggtcttcccactcagccatcttcagtacttctacccagaagagctggaccag
cttctgtgtggcagtaaagcagacacttgggatgcaaagacattgatggaatgctgcagg
cctgaccatggctacacccacgacagtcgggctgtgaagttcttgtttgagattctcagt
agttttgataatgagcagcagaggttgtttctccagtttgtgactggtagcccacgattg
ccggttggaggatttcggagtttaaatccacctctgacgattgtgcggaagacatttgaa
tcaacagagaacccagatgactttttaccatctgtaatgacttgtgtgaactatcttaag
ttgccggactactcgagcattgagataatgcgtgacaaactgttgatagcagcaagagaa
ggccaacagtcattccatctttcctga
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integrated database retrieval system
