Mastomys coucha (southern multimammate mouse): 116088721
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Entry
116088721 CDS
T07224
Symbol
Ngef
Name
(RefSeq) ephexin-1 isoform X1
KO
K07525
neuronal guanine nucleotide exchange factor
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
116088721 (Ngef)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116088721 (Ngef)
Membrane trafficking [BR:
mcoc04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
116088721 (Ngef)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SOS1_NGEF_PH
SH3_9
PH
SH3_2
SH3_16
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
116088721
NCBI-ProteinID:
XP_031224165
LinkDB
All DBs
Position
Unknown
AA seq
618 aa
AA seq
DB search
MELLAAAFSAACAVDHDSSTSESDTRDSAAGHLPGSESSSTPGNGTTPEECPALTDSPTT
LTEALQMIHPIPADSWRNLIEQIGLLYQEYRDKSTLQEIETRRQQDAEIQGNSDGSQVGV
DAGEEEEEEEEEEELATLPERRALPQICLLSNPHSRFNLWQDLPEIQSSGVLDILQPEEI
KLQEAMFELVTSEASYYKSLNLLVSHFMENERLKKILHPSEAHILFSNVLDVMAVSERFL
LELEHRMEENIVISDVCDIVYRYAADHFSVYITYVSNQTYQERTYKQLLQEKASFRELIA
QLELDPKCKGLPFSSFLILPFQRITRLKLLVQNILKRVEERSEREGTALDAHKELEMVVK
ACNEGVRKMSRTEQMISIQKKMEFKIKSVPIISHSRWLLKQGELQQMSGPKTSRTLRTKK
LFREIYLFLFNDLLVICRQIPGDKYQVFDSAPRGLLRVEELEDQGQTLANVFILRLLENA
DDREATYMLKASSQSEMKRWMTSLAPNRRTKFVSFTSRLLDCPQVQCVHPYVAQQPDELT
LELADILNILEKTEDGWIFGERLHDQERGWFPSSMTEEILNPKIRSQNLKECFRVHKMED
PQRSQNKDRRKLGSRNRQ
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggagctgctggctgcagccttcagcgccgcctgcgccgtggaccacgacagctccacc
tcggagagcgacacgcgcgactcggcggcgggacacctgcccggcagcgagtcatcctcc
acccctggaaatggaaccacacccgaggagtgcccggccctcaccgacagccccaccacg
ctcaccgaggccctgcagatgatccatcccattcccgccgactcctggagaaacctcatt
gaacaaatagggctcctgtatcaagagtatagagacaagtcgactctccaagaaatcgaa
acccggaggcagcaggatgcagaaatacaaggcaattcggatgggtctcaggttggggta
gatgctggagaggaggaggaggaagaggaggaggaggaggagctggctaccctccctgag
aggagagctctgcctcagatctgcctgctcagcaacccccactccaggttcaacctctgg
caagatcttcctgagatccagagcagcggtgtcctggacattctccaacctgaggagatc
aagctgcaggaggccatgtttgagttggtcacctccgaggcctcctactacaagagcctg
aacctgctggtgtcgcacttcatggagaacgaacggctgaagaagatcctgcacccgtct
gaggcccacatcctcttttccaacgtcctggatgtcatggctgtcagtgagcggtttttg
ctggagctggaacaccgcatggaggagaacatcgtcatctcggatgtgtgcgacattgtg
taccgttatgcggccgatcacttctcagtctatatcacctacgtcagtaaccagacctac
caggaaaggacatacaaacagctcctacaggagaaggcgtctttccgggaactgatcgca
cagctggagctggaccccaagtgcaagggcctgcctttctcctccttcctcatcttgccc
ttccagaggatcacaagactcaagctgctggtccagaacatcctgaagagagtggaagag
aggtctgagcgggaaggcaccgccttggatgcccacaaggagctagaaatggtggtaaag
gcatgcaatgagggtgtccggaagatgagccgcacggaacagatgattagcattcagaag
aagatggagttcaagatcaagtcagtgcccatcatctcacactcccggtggctgctgaag
cagggtgagctgcagcagatgtctggtcccaagacctcccgcactctgcggaccaagaag
ctcttcagagaaatttacctcttcctcttcaatgacctgctggtgatctgccggcagatt
cctggagacaagtaccaagtgtttgattcagccccgaggggcctgcttcgagtggaggag
ctggaggaccagggccaaacactggctaatgtgttcatcctgcggctgctggaaaatgca
gatgaccgggaggccacctatatgctgaaggcatcctcccagagcgaaatgaagcgctgg
atgacttcactggcccccaacaggaggaccaagtttgtatccttcacatctcggctgttg
gactgcccccaggtccagtgtgtgcacccatatgtggcccagcagcccgatgagctgacc
ctggaactggcagatatcctgaacatcctggagaagacagaggatgggtggatctttggt
gagcggctgcatgaccaggagagaggctggttccccagttccatgacagaggagatcctg
aaccccaagatccgttcccagaacctcaaggaatgtttccgagtacacaagatggaggac
cctcagcgcagccagaataaggaccgcaggaagttgggcagccggaatcggcaatga
DBGET
integrated database retrieval system
