Mastomys coucha (southern multimammate mouse): 116088734
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Entry
116088734 CDS
T07224
Name
(RefSeq) nuclear RNA export factor 2-like
KO
K14284
nuclear RNA export factor
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03008
Ribosome biogenesis in eukaryotes
mcoc03013
Nucleocytoplasmic transport
mcoc03015
mRNA surveillance pathway
mcoc05014
Amyotrophic lateral sclerosis
mcoc05164
Influenza A
mcoc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116088734
03015 mRNA surveillance pathway
116088734
03008 Ribosome biogenesis in eukaryotes
116088734
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
116088734
05168 Herpes simplex virus 1 infection
116088734
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
116088734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcoc03019
]
116088734
03009 Ribosome biogenesis [BR:
mcoc03009
]
116088734
Messenger RNA biogenesis [BR:
mcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116088734
mRNA cycle factors
Stress granule specific factors
116088734
Ribosome biogenesis [BR:
mcoc03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
116088734
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
NTF2
LRR_4
LRR_8
Motif
Other DBs
NCBI-GeneID:
116088734
NCBI-ProteinID:
XP_031224203
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Position
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AA seq
428 aa
AA seq
DB search
MNLNYEISDKENKKISIYVTSSSEPASVRYKLTPEQMNTLKLSMKKRYNVSRNALYLRKL
RFDQDLMYRGIDLFLNRRSCMTATLQVIQEDYPQLLSLNVSNNKIYCLDGLSELIEKAPH
VKTLKLSGNLLRTVWELEKMKGLKLEKLWLEGNPLCSSFRDHSSYVSAILNYFPELSHLD
GRKLFPTIDINTLEIIKPRKQSYKGSKSLKNLLMQFMLQYYLIYDYGDRYSLLSAYHAEA
CFSLTIAFNSDKEDLSSLEDYLKDNRNMMRLKNSFLLMQLLKHKNYNIVACLHELPKTQH
DLNSYVIDLCVQTEKMICFSVNGVFKEVEGKSWGCVRAFTRTFILTVDSQFRLCIVNDEM
ILRNASPAETKKAFSTTRPTMSYDQSCQNTQTDLKPFENKWKCIRIDEAIFIFQTEEMFS
SEFFRCNF
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaactacgagataagtgacaaggaaaacaaaaagatttctatctatgtgact
tcatctagtgaacctgcatctgtacgttataagttaacaccagaacaaatgaatacccta
aagctgagtatgaagaaacgatataatgtctccaggaatgctctgtacctcaggaagctt
cgcttcgaccaagacttgatgtatcgtggaattgacctgtttctgaacagaagaagctgc
atgactgccacccttcaagttatccaagaggattacccccagctgctgtccttgaatgtg
agcaacaacaaaatatactgcctagatggcctgtctgaattaatagagaaggcccctcat
gtcaagaccctcaaactttcaggaaatttgctaagaacagtctgggagttggagaagatg
aaagggctgaagctggaaaagctgtggctagaagggaaccccttgtgcagctccttccga
gaccattcttcctatgtaagtgcaattctgaactattttccggagttgtcacacttagat
ggcaggaaattattcccaacaattgacattaacaccctggaaataataaaaccacgcaag
caaagctataaaggatctaagagtctgaagaatctgctcatgcaatttatgcttcagtac
tacttgatctacgactatggtgatagatacagtctccttagcgcttaccatgcagaagct
tgtttctccctgacaatcgctttcaactccgataaggaagatctgagcagcttagaagac
tacctcaaagataacaggaatatgatgaggctgaagaactcctttttgctgatgcagctg
ctgaagcacaaaaactataacatcgtggcctgcctccacgaactgccaaaaacacagcat
gatttaaattcctatgtaatagacctttgtgttcagacagaaaaaatgatttgcttctct
gtcaatggagttttcaaggaagtggaaggaaagtcttggggatgtgtccgtgccttcacc
cggacattcatcttaactgttgacagtcaattcaggctgtgcattgtgaatgatgagatg
attttgaggaatgccagccccgcagagaccaagaaggctttctctaccactaggccgaca
atgtcctacgaccagagttgccagaacacccaaactgatttgaagccttttgagaacaag
tggaaatgcatcagaattgatgaagccatctttatattccagaccgaggaaatgttctca
agtgaattcttcagatgcaacttctaa
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