Mastomys coucha (southern multimammate mouse): 116088753
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Entry
116088753 CDS
T07224
Symbol
Col6a3
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-3(VI) chain
KO
K06238
collagen type VI alpha
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04151
PI3K-Akt signaling pathway
mcoc04510
Focal adhesion
mcoc04512
ECM-receptor interaction
mcoc04518
Integrin signaling
mcoc04820
Cytoskeleton in muscle cells
mcoc04974
Protein digestion and absorption
mcoc05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
116088753 (Col6a3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116088753 (Col6a3)
04518 Integrin signaling
116088753 (Col6a3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116088753 (Col6a3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
116088753 (Col6a3)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
116088753 (Col6a3)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
116088753 (Col6a3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mcoc04147
]
116088753 (Col6a3)
00536 Glycosaminoglycan binding proteins [BR:
mcoc00536
]
116088753 (Col6a3)
Exosome [BR:
mcoc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116088753 (Col6a3)
Glycosaminoglycan binding proteins [BR:
mcoc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
116088753 (Col6a3)
Hyaluronan
Extracellular matrix or blood plasma proteins
116088753 (Col6a3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
Kunitz_BPTI
fn3
Motif
Other DBs
NCBI-GeneID:
116088753
NCBI-ProteinID:
XP_031224238
LinkDB
All DBs
Position
Unknown
AA seq
3068 aa
AA seq
DB search
MRKHRHLPLVAVFSFLLSGIAMTHAQQQAAQDSADIVFLIDGSQNTGKANFDVIRDFLVN
VLERLSVGNRQVQVGVVQYSDEPRTMFSLNSYPSKAMVLDAVKSLSFAGGESANIGQALD
FVVENHFTQTGGSRMEEGVPQVLVLISAGPSSDEIRDGVVALKQAGVFSFGLGAQAASRA
ELQHIATDDSLVFTVPEFRSFGDLQEQLLPYLVGVAQRHIVLQPPTIVTQVMEVNKRDIV
FLVDGSSSMGHPNFNAIREFIIKVIQKLEIGKDLVQVSVAQYADTVKPEFNLSSYATRKE
VTTAIRKMKVLDGPALYTGSALDFVRNNLFTSSTGHRAAEGVPKLLVLITGGKSLDEVSQ
PAQELKREGIMALVVGSRAADEDELKEIAFDSSLVFIPAEFRVAPLQNMLPNLMAPLRTL
TGTTEVHVNKRDIIFLLDGSDNVGKTNFPYVRDFVTNLVNSLDVGRDNIRVGLVQFSDTP
VTEFSLDTYQTKSELLAHLRRLQLKGGSGLNAGSALSYIHANHFTEAGGSRTREHVPQLL
LLLMAGPSEDAYLQAANALVRSGVLTFCVGTNQADKAELEHIAFNPSLVYLMDDFSSLPS
LPQQLIQPLTTYVSGGVQEVPLYQPESKRDILFLFDGSVNVLGQFPAVRDFLYRIIEELD
VKPDGTRVAIAQFSDDVRLESRFSEHQTKAEILNLVKKMKIKTGKGLNLGYALDYALRNI
FVRSAGSRIEDNVQQFLVLLVAGRSTDAVAGPASSLKQRGVIPFIFQAKNANPSELEQIV
PSPAFILAAESLPKIGDLQSQIVSLLKAEQGSGPVSGEKDVVFLIDGSEGVRSGFPLLKD
FVQRVVESLDVGPDRVRVALVQYSDRTRPEFYLNSHMDQQGVISAIRRLTMLGGPTPNTG
AALDFVLRNILTSSTGSRIAEGVPQLLIVLTAERSGDDVRGPSVVLKQGGAVPIGIGIGN
ADISEMQTISFIPDFAVAIPTFRDLGTIQQVISERVVQLNREELSSLKPVLTLSPDAGAG
SKKDVVFLIDGSQNAGPEFQHIRTLIERLVEYLDIGFDTTRVAVIQFSEDSKMEFPLNAH
FSKDEVQNAVRRLRPKGGRQVYIGNALEYVLKNIFQRPLGSRIEEGVPQFLVLISSGKSA
DEVDDSAVELKQFGVAPLTIARHADQEELVKISLSPEYVYSVSTFRELPRLEQKLLTPIT
TLTSQQIQQILASTRYPSVVESDAADIVFLIDSSDAVKPDGIAHIRDFVSRIVRRLNIGP
SKVRIGVVQFSNDVFPEFYLKTHKSQNSVLEAIRRLRFKGGSPLNTGRALEFVARNLFVK
SAGSRIEDGVPQHLVLFLGGKSQDDVARHAQVIRSSGIVSLGIGDRNIDRTDLQAITNDP
RLIFTVREFRELPNIEERVMLSFGPSGATPQPPGVDLPSPSRPEKKKADIVFLLDGSINF
RRDSFQEVLRFASEIVDTVYEEGDSIRVGLVQYNSDPTDEFFLRDFSTKTQIIDAINKVV
YKGGRHANTRVGIEHLLRNHFVPDAGSRLEERVPQIAFVITGGKSVEDAQDVSLALTQKG
VKVFAVGVRNIDSEEVGKIASNSATAFRVGSVQELSELSETVLETLHDAMHETLCPGVTD
VSKACNLEVILGFDGSRDQNVFVSQKGLESKVDTILNRISQIQRISCSGNQLPTVRVSVV
ANTPSGPVEAFDFAEYQPELFEKFRNMRSQHPYILTADTLKLYQNKFRQSSPDTVKVVIH
FTDGADGDLADLHRASEELRQAGAQALILVGLERVANLERLMQLEFGRGFMYDRPLRLNL
LDLDYELAEQLDNIAEKACCGVPCKCSGERGDRGPIGSIGPKGISGEDGYRGYPGDEGGP
GERGPPGVNGTQGFQGCPGQRGVKGSRGFPGEKGELGEIGLDGLDGEEGDKGLPGSSGEK
GSPGRRGDKGPKGEKGERGDVGIRGDPGDSGRDSQQRGPKGETGDIGPMGLPGRDGISGS
PGDPGKDGGFGRRGPAGAKGNRGGPGQPGFEGEQGTRGSQGPPGPVGPPGLIGEQGIPGP
RGGGGTAGAPGERGRTGPLGRKGEPGEPGPKGGTGNRGPRGETGDDGRDGVGSEGRRGKK
GERGFPGYPGPKGTPGEPGADGPPGPKGIRGRRGNSGPPGAVGQKGDPGYPGPSGHKGNR
GDSVDQCALIQSIRDKCPCCYGPLECPVFPTELAFALDTSEGVTQDTFSRMREVLLSIVG
DLTIAESNCPRGARVAVVTYNNEVTTEIRFADSKKKSALLDSIQNLQVALTSKQQSLETA
MSFVARNTFKRVRSGFLMRKVAIFFSNKPTRASPELREAVLKLSDAGITPLFLTSQEDRQ
LINALQINNTAVGHALVLPARRDLTDFLKNVLTCHVCLDICNIDPSCGFGSWRPSFRDRR
AAGSDVDIDLAFILDSSEATTLFQFNEMKKYIGYVIRQLDLSPDPKASQHFARVAVVQQA
TYESVDNASVPPVKVEFSLTDYGAKEKLLDFLSRRMTQLQGTMGLGNAIEYTIENIFESA
PNPRDLKILVLMLTGDMQRQQLEEAQKAILQAKCKGYFFVVLGIGRKVNVKEVYSFASEP
NDVFFKLVDKSTELNEEPLMRFGRLLPSFVSSENAFYLPPDLRKQCDWFQGDQPVKNGVK
FGHKQLNTPHTVNSSLTSKVVTTMKPVTTTKSTIVNLPPAKPAPARPAPAQPVLAKPAPA
QPAPAQPALAKPASAKSVPPQPVHVQPAPAQTAPAKPAPAKPAPAQTAPAKPAPAKPAPA
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAQPAPAQPAPAQPTLTKSTAVKPA
SANKPVAAKPVATNTATVRPAVAAKPAAAKPAATRPLAAAVRPVATKPEAPRQQAKPAAT
KPATTKPLARVSREVQVSEVTENSARLHWERPEPSSSYFYDLTVTSAHDQSLVLRQNLTV
TDRVVGGLLAGQLYHVVVVSYLQSQVRAIYQGSFNTKKTQPPLLQAAHRASSSTINLMVN
TEPLFLTKTDICKLSKDAGTCVDYKLLWHYDLDSKSCKRFWYGGCGGNENRFHSQEECEK
MCSPELTV
NT seq
9207 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaacaccggcatctgcccctagtggctgtctttagctttctcctctcaggcatt
gccatgacgcatgcccaacagcaagcagctcaagactcagctgacattgttttccttatt
gatggatcacagaacaccggaaaagccaatttcgatgtcattcgagacttccttgtaaat
gtccttgagagactctcagttggaaatcggcaggtccaagtgggggtggtccagtatagt
gatgagcccagaaccatgttctccttgaacagctacccctccaaggctatggttctggat
gccgtgaaaagtctcagctttgctgggggagagtcagccaatataggccaggcccttgac
tttgtagtggagaatcacttcacgcagacaggtggcagccgtatggaggagggggtcccg
caggtgctggtcctcataagtgctgggccttctagtgatgagattcgagatggggtggta
gctctgaagcaggctggtgtgttctcgtttggccttggagcccaggcagcctccagggca
gagcttcagcacatagctactgatgacagcttggtgtttactgtcccggaattccgtagc
tttggggacctccaggagcaattactgccgtaccttgttggtgtggcccaaaggcacatt
gtcttgcaaccaccaactattgtcacacaagtcatggaagtcaacaagagagacatagtc
ttcctggtggatggttcctccagcatggggcatcccaacttcaatgccatccgagagttc
attatcaaagtcatccagaagctggaaattggaaaggacctggttcaggtatcagtggct
cagtatgcagacactgtcaagcctgagttcaatttaagtagctacgccaccagaaaggaa
gtcacaactgctatacggaagatgaaggtcctggatggcccagccctatacacggggtct
gctctggactttgttcgaaacaacctcttcactagctcaaccggccacagggccgctgag
ggagttcctaagctcctggtgctgatcacaggtggtaagtcccttgatgaagtcagccag
cctgcccaggagctgaagagagagggcatcatggccttggtcgttggcagcagggccgcc
gatgaggatgagctgaaggagatcgcttttgactcctccctggtcttcattcccgcggag
ttccgcgttgctcctttacagaacatgctgcccaacctgatggcccccctcaggaccctc
accggaaccacggaagttcacgtaaacaaacgggatatcatcttccttttggatggctcc
gacaacgttgggaaaaccaatttcccttatgtgcgtgactttgtaaccaacctagttaac
agcctcgatgttggacgtgacaatatccgtgttggtttggtgcagtttagtgacactcca
gtcacggagttctctctagacacttaccagaccaagtcagagctgcttgctcacctgagg
cgcttgcagctcaaggggggctccggcctgaacgcaggctctgccttgagctatatccat
gccaatcatttcacggaggcaggcggcagcaggactcgggaacatgtgcctcagctgctg
ctcctgctcatggccgggccttctgaggatgcctatttgcaagctgccaatgctctggtg
cgctcaggcgtgctgaccttctgtgtggggaccaatcaggcggataaggctgagttagag
catattgcttttaatcccagcctggtatacctcatggacgatttcagctccctgccatct
ttgcctcaacagctgattcagcccctaaccacatatgttagtggaggtgttcaggaagtc
ccactataccagccagagagcaagcgggacattcttttcctctttgatggctcagtcaat
gtcttgggccagttccctgctgtcagagactttctctacaggatcattgaggagctcgat
gtgaagccggatgggacccgggtagcaatagctcagttcagtgatgacgtcaggctggag
tcccgtttcagcgagcaccagacgaaggctgaaatccttaatctcgtgaagaagatgaag
ataaagacaggcaaaggcctcaatctgggctacgccctggactatgcgcttaggaacatc
tttgtgaggtccgctggcagccgcatcgaggataacgtgcagcagttcctggtgctgctg
gttgctggaaggtcgacggatgctgtggccgggcctgcaagctccctgaagcagagggga
gtgatacctttcatttttcaagccaagaatgccaaccccagtgagctggagcagatcgtg
ccatcccctgcattcatcctggctgcagagtcactccctaagattggggacctccagtca
cagattgtgagccttctgaaagcggaacagggttcaggccctgtatcaggtgaaaaagat
gtggtatttctgattgatggctccgagggtgtccgaagtggcttccccctgctgaaggac
tttgtgcagagggtagtagagagtctggatgtgggtcccgatagggtgcgtgtggcactg
gtgcagtacagtgaccggaccaggccggagttctacctcaattcccacatggaccagcag
ggtgtcatcagcgccatccgcaggctgacaatgctgggcggcccgacccctaacacaggg
gcggcactggacttcgtgttgaggaatatcctgaccagttctactgggagcagaatcgca
gaaggtgtccctcagctcctgattgtcctcacggcggagcggtcgggggatgatgtgaga
ggcccctcggtggtcctgaagcagggcggagctgtgcccattggcattggcattgggaat
gctgacatctctgaaatgcagaccatctccttcatccctgacttcgctgtggccatcccc
accttccgggaccttgggacaatacagcaagtcatctctgagagggtggtccagctcaat
cgtgaggagttgagttcgctgaaacctgttttgacgctctcaccagatgcaggtgctggc
agcaagaaagacgtggtctttctcatcgatggatcccaaaacgccggccccgagttccag
cacatccgtaccctgattgagaggctcgtcgagtacctggacataggctttgacaccacc
cgggtagccgtcatccagttcagtgaggactccaagatggagtttcctctcaacgcccac
ttcagcaaggatgaagttcagaacgctgtgcgcaggctgcggcccaagggtgggaggcag
gtctacatcggaaatgccctggagtacgtgctgaagaacatcttccagaggccgctgggg
agccggatagaagagggcgttccgcagttcctagtcctcatttcttctgggaagtctgct
gatgaggtggacgactcagccgtggaactcaagcagttcggcgtggcccctctcaccata
gccaggcacgcagaccaagaggagctggtgaagatctccctgagtcctgaatacgtgtac
tccgtgagcaccttcagggagctgcccagactggagcagaagctgctgacgcccatcacc
actctaacctcacagcagatccagcagatcctggccagtactcgatatccttcagtggtt
gaaagcgatgctgctgacatagtctttctgattgacagctccgatgctgtcaagcccgat
ggcatcgctcacatccgtgacttcgtcagcaggatcgtccgcaggctcaacattggcccc
agtaaagtgaggattggggttgtgcagttcagtaatgacgtcttccctgagttctacctg
aagacccacaagtcacagaacagtgtgcttgaagccatacggcgtctgaggttcaaagga
ggatctcccctaaacactggcagagccctggagtttgtggcaagaaacctctttgtgaag
tctgctgggagccggatagaagatggggtccctcagcacctggtcttatttctgggtggg
aagtctcaggacgatgtggctaggcatgcccaagtcataaggtcatcagggatcgtgagt
ttaggaataggagaccggaacatcgataggacagacttgcaagccatcaccaatgacccc
agactgatcttcacagttcgggaattcagagagctgcccaacatagaagagagagtcatg
ctttcctttggaccctctggggctactcctcagcctccaggggtagatttaccttctcct
tcccggccagagaagaagaaggcagacattgtgttcttgctggacggttccatcaatttt
aggagggacagtttccaggaagtactccgttttgcgtctgaaatcgtggacacagtctat
gaagagggcgattccatcagagtagggctggtccagtacaactcggaccccacggatgaa
ttcttcctgagggacttttctaccaaaacacagattatcgatgccatcaacaaagtcgtc
tacaaaggagggaggcacgccaacacccgggtgggcattgagcacctgctgcggaatcac
ttcgtgcccgatgctggtagccgcctggaggagcgggttcctcagatcgccttcgtgatc
acaggaggaaagtcagtggaggatgctcaggacgtgagcctggctctcacccagaaaggt
gtcaaggtgtttgccgttggcgtgaggaacatcgactccgaggaggtgggaaagatagca
tccaacagtgccacagccttccgggtgggcagcgtccaggaactgtccgaactgagtgag
acggtgctcgagactctgcacgacgccatgcatgagaccctctgtcctggtgtgacggat
gtttccaaagcatgtaatctggaagtcattctggggtttgatggatcccgagatcagaat
gtgtttgtgagtcagaagggccttgagtccaaggtggacaccatcttgaacagaatcagt
cagatacaaaggatcagctgcagcggcaaccagctgcccactgtgcgggtgtctgtggtg
gccaacacgccctctgggccagtggaggcctttgactttgccgagtatcagccagagctg
ttcgagaagtttcgcaacatgcgcagccagcatccatacatcctcacagctgacacactg
aagctctaccagaataaattcaggcagtcgtcgcctgacactgtgaaggtagtcattcac
ttcacggatggagcagatggagacctggctgacttacacagagcatctgaggaactccgg
caagcaggtgcccaagccctgatcctggtgggtcttgaacgtgtggctaacctggagcgg
ctgatgcagctggagtttgggcggggcttcatgtatgacagacccctgaggctcaaccta
cttgacttagactatgaactggcagagcagcttgacaatattgctgagaaagcttgctgt
ggggttccatgcaagtgctctggagagaggggagacagagggcccattggcagcatcggg
ccaaagggtatctctggagaagatggctatcgaggctacccaggtgatgaaggcggacct
ggtgagcgaggtccaccgggtgtgaatggcacacaaggtttccagggctgcccaggccag
aggggagtgaagggttctcgaggattcccaggcgagaagggtgaactgggagaaatcggc
ttggatggtctggatggcgaagagggagacaaggggctgcccggttcatctggagaaaag
gggagtcctggaagaagaggtgacaaaggacccaaaggagaaaaaggagagagaggagat
gttggaattcgaggtgacccgggtgactctggacgagacagccagcagagaggacccaaa
ggagagacaggcgacattggacccatgggtctcccaggcagagatggcatctccggaagc
ccaggagaccctggaaaggatggtggcttcggccgaaggggacctgcaggagctaagggc
aacagaggcggtcctggccagccaggcttcgaaggggaacagggtacaagaggctcacag
ggtccgcctggccctgttggtcccccaggcctgatcggggaacaaggaattcccggacct
cggggaggtggaggtacggctggggctcctggagaacgtggcagaactggtccgctgggg
aggaagggtgagccaggagagccagggccgaagggaggcaccgggaaccgtggaccccgt
ggggagacgggagatgacgggagagacggagttggcagtgaaggacgcagaggcaaaaaa
ggagaaagaggcttccctggctatccgggaccaaagggtacccctggtgagccaggggca
gatggaccaccaggacccaaaggcatcagaggtcgaaggggaaattcaggacctccaggg
gcagttggacagaagggagaccctggctacccaggaccatctggtcacaagggcaaccga
ggcgactccgttgatcaatgtgccctcatccaaagcatcagagacaaatgcccttgctgc
tatgggcccctggagtgccctgtattcccaacagaactcgcctttgccctggacacctct
gagggtgttactcaggacaccttcagccggatgcgagaagtacttctgagcattgtggga
gatctgaccattgccgagagcaactgtccgaggggtgctcgagtggctgtggtcacctat
aacaacgaggtgaccacagagatccgctttgctgactccaagaagaagtctgccctcttg
gacagtattcagaatctccaggtggccttgacctctaagcagcagagcctagagacagcc
atgtcattcgtggccagaaatacattcaaacgtgtgaggagtggattcctgatgaggaaa
gtggccattttcttcagcaataagcccacgagggcatcccctgagctccgcgaggctgtg
ctcaagctttcagatgcggggatcacacccttgttccttacaagccaggaggaccgacag
ctcatcaatgccttgcagatcaataacacagcagtgggacatgccctggttctgcctgca
aggagggatctcacagacttcctgaagaatgtccttacctgccacgtttgcctggacatt
tgcaacatcgacccatcctgtggctttggcagctggaggccttccttcagggaccggagg
gcagcgggcagcgatgtggacatagacctggcattcatcttggacagttcagaggctacc
actctgttccagttcaacgagatgaagaagtacataggctatgtgatcagacagctggac
ctgagcccagaccccaaggcttcccagcactttgccagagtggctgtcgtgcagcaagca
acctacgagtctgtggacaatgccagtgtgccgcctgtgaaggtggaattctcactgaca
gactatggtgccaaggaaaagctgttggacttccttagccggaggatgacccaacttcag
ggaaccatgggcctgggcaatgcaattgaatacactatagagaacatctttgaaagtgct
ccaaacccacgggacctcaaaattttggtgctgatgctgacgggtgacatgcagaggcag
cagctggaggaagcccagaaagccatcctacaggccaagtgcaagggctacttcttcgtg
gttctgggcattggcaggaaggtgaatgtcaaggaggtctacagctttgccagcgagccc
aatgatgtcttcttcaaacttgtggacaaatcaactgagctcaacgaggagcctctgatg
cgctttgggaggcttctcccatcctttgtcagcagtgaaaacgcattttacttgcctcca
gatctcaggaaacagtgtgattggttccaaggggaccaaccagtgaagaatggcgtcaag
tttggtcacaaacagctaaacactccacatactgttaattcaagtcttacatccaaagtt
gtgaccacaatgaagccagtgacaacaaccaaatcaacaattgtaaatctgccacctgct
aagccagcccccgctaggccggcccctgctcagccagttcttgctaagccagcccctgct
cagccagcccctgctcagccagcccttgctaagccagcttctgctaagtcagtgcctcct
cagccagtccatgttcagcctgcccctgctcagacagctcctgctaaaccagcccccgct
aaaccagcccctgctcagacagctcctgctaaaccagcccccgctaagccagcccctgct
nncnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnccctgctcagccagcc
cctgctcagccagcccctgctcagccaacccttactaaatcaaccgctgtgaaaccggcc
tctgccaacaagcctgtggcagccaaacctgtggccacaaacacagccacagtcagacct
gcagtagcagcgaagcccgcagcagcgaagcccgcagcaacgagaccccttgctgctgcc
gtaaggccagttgctaccaaaccagaggcccccaggcaacaggccaaaccagccgccacc
aagccagccactactaagcccttggcgagagtgtctcgagaagtccaggtctctgaagtc
acagagaacagtgccagactccactgggagcggcccgagccttccagctcctatttttat
gacctcactgtaacctcggcccatgaccagtccttggttctgagacaaaacctcactgtc
actgaccgtgtcgtcggaggcctgctggctggacagctgtaccatgtcgtagtggtctcc
tacctgcagtctcaggtcagggccatctaccaaggaagtttcaatacgaagaaaactcag
cctccacttcttcaggcagcacacagagcatccagttcaaccatcaacctaatggtgaac
acagaaccattgtttctcactaaaacagacatatgtaagctgtccaaagatgctgggact
tgtgtggactacaaattactatggcactatgacttagacagcaagagttgcaagagattc
tggtacggaggctgtgggggcaatgagaacagattccactcacaggaagaatgtgaaaag
atgtgtagtcctgagctaacagtctga
DBGET
integrated database retrieval system
