Mastomys coucha (southern multimammate mouse): 116088862
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Entry
116088862 CDS
T07224
Symbol
Tbc1d8b
Name
(RefSeq) TBC1 domain family member 8B
KO
K19951
TBC1 domain family member 8/9
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116088862 (Tbc1d8b)
Membrane trafficking [BR:
mcoc04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
116088862 (Tbc1d8b)
Endosome - Golgi transport
Rab GTPases and associated proteins
116088862 (Tbc1d8b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
116088862
NCBI-ProteinID:
XP_031224497
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Position
X
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AA seq
1118 aa
AA seq
DB search
MWLKPEEVLLKNALKLWLMERSNEYFVLQRRRGYGEEGGGGLTGLLVGTLDSVLDSTAKV
APFRILHQTPDSQVYLSIACGANREEITKHWDWLEQNIMKTLSVFDSNEDITNFVQGKIR
GLIAEEGKQSFAKEDDPEKFREALLKFEKSFGLPEQEKLVTYYSCSYWKGRVPCQGWLYL
STNFLSFYSFLLGSEIKLIISWDAISKLEKTSTVILTESIHVCSQGEDHYFSMFLHINET
YLLMEQLANYAIKRLFDKETFDNDPVLDDPLQITKRGLEYRAHSEQFKAFFRLPKEETLK
EVHECFLWVPFSHFSTHGKMCISENYICFASQDGNLCTVIIPLREVLAIDKTDDSNRSVI
ISIKGKTAFRFNEVKDFEQLVAKLRLKCRAASTQDDVSTEVAVSSDSTDPSENFETQPLT
CPKECSKTVNTEALMTVFHPQNLENLDSKMLKEKMKEQSWNILFSECGRGVSMFRTKKTR
DLVVRGIPETLRGELWMLFSGAVNDMATNPGYYAEVVEQSLGTSNLATEEIERDLRRSLP
EHPAFQSDTGISALRRVLTAYAYRNPKIGYCQAMNILTSVLLLYAKEEEAFWLLVAVCER
MLPDYFNRRIIGALVDQAVFEELIRDHLPQLTDHMTDMTFFSSVSLSWFLTLFISVLPIE
SAVNVVDCFFYDGIKAILQLGLAILDYNLDKLLTCKDDAEAVTALNRFFDNVINKDSPLP
SSVQQGSNINDEKRAHTKVDITDLIREANEKYGSIRYEDIHSMRCRNRLYVIQTLEETTK
QNVLRVVSQDVRMSLQELDELYVIFKKELFISCYWYLSCPGLKHHDPSLSYLEQYQIDCQ
QFRVLYHLLSPWAHSANRDSLALWTFRLLDENSDCLINFKEFSSAIDIMYNGSFTEKLKL
LFKLHIPPAYTEVMSKTSSKDDQLSTEELLYFSQLQVSKPANEKETESGRNSPEKGKGKI
DIQAYLSQWQDELLKKEENIKDLPRMNQSQFIQFSKTLYNLFHEDPEEESLYQAIAIVTN
LLLRMEEVGRKLHSPASSAKGYSSAACDSGPSEGNAESSVKKDPFPPREENQWSFAFEQI
LASLLNEPALVSFFERPLDLKVKLENAKSSQLRSRTKM
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgtggctgaagcccgaggaagtgctgttgaaaaatgcgctgaagctgtggctgatggaa
agatccaacgagtactttgtcctgcaaaggcgtcgaggctatggggaagaaggcggaggg
ggacttacagggcttttggttgggacactcgattctgtcttagactctactgctaaagta
gctccatttcgcatcctacaccagacaccagattctcaagtatacttgtcaattgcatgt
ggagccaacagagaagaaataacaaaacattgggactggttggaacaaaacatcatgaag
actttatctgtgtttgattcgaatgaagatattactaattttgtacaaggcaaaataaga
ggactaattgctgaagagggaaaacaatcttttgctaaagaagatgatcctgagaaattt
cgagaagcccttttgaaatttgaaaaatcttttggtttaccagagcaagaaaaactagta
acttattattcctgcagttattggaaaggacgggttccgtgtcagggttggctctatcta
agtaccaactttctgagcttctattctttcttgctaggatcagaaattaaactcattatc
tcctgggatgcaatctcaaaacttgaaaagacttcaactgttatactaacagagagtatt
catgtatgttctcaaggagaggatcactatttttcaatgtttttgcacattaatgagaca
taccttcttatggagcaactggcaaactatgccataaagagactttttgataaggaaaca
tttgataatgacccagtccttgatgatcctctacagattaccaaaagaggtttggaatat
cgagcccacagtgagcagttcaaagccttttttaggctacccaaagaagagactttgaaa
gaagtacatgaatgtttcttatgggtaccattcagccacttcagtactcatggaaaaatg
tgcatttcagaaaactatatttgctttgctagccaggatgggaatctatgtactgtaatc
attccattacgagaggtcttagctatagataaaactgatgactccaacagatcggtcatc
attagcatcaaaggaaaaacagcttttcgtttcaatgaggttaaagactttgagcaactg
gtggcaaaactcaggctcaagtgccgggcagcttcaactcaagatgatgttagtacagag
gttgctgttagttctgactctacagacccatctgagaattttgagacacaacctttgaca
tgtccaaaggaatgcagcaaaactgtgaacactgaagccttaatgacggtatttcaccct
caaaatctggaaaatcttgattctaaaatgttgaaagagaagatgaaggaacagtcgtgg
aacatcttattttcagaatgtgggcgtggcgttagcatgttccggacaaaaaagactcga
gatctggtggtaagagggattccagagactttaagaggagagctctggatgcttttctca
ggtgctgttaatgacatggcaactaaccctggctattatgctgaagtggttgaacagtcc
ttagggacctccaacttggctactgaagaaattgagcgtgatttgcgtcgctctctgcct
gaacacccagcatttcagagtgatactggaatatctgctctgaggcgggtactgacagcg
tatgcatataggaatcccaaaataggatactgccaggcgatgaacattctgacttcagtg
ttgctcctatatgcaaaagaagaagaagccttttggcttctggttgctgtatgtgaacga
atgctgcctgattattttaatcgtcgaatcattggtgccttggtggaccaggcagtgttt
gaagaacttatcagggatcaccttcctcagctgacagaccacatgaccgacatgactttc
ttttcctcagtttctctttcatggttcctcacacttttcatcagtgtgctacctattgaa
agtgcagtaaatgtggtggactgtttcttctatgatgggataaaagccattttacagctg
ggattggcaatactggactacaatttagacaaacttctgacatgtaaagatgatgctgaa
gccgtgacggcactaaacaggttctttgacaatgtcattaataaggatagcccattgcct
tcaagtgttcagcagggctcaaatatcaatgatgaaaaacgtgctcacactaaggtggat
atcacagatctgattagagaggccaatgagaaatatggtagtattcgctacgaagatata
cacagcatgcgctgtcgaaataggttgtatgtgatacagaccctggaggaaacaacaaag
cagaatgtgttgcgtgttgtatcacaagatgtgagaatgagccttcaggaattggatgaa
ctttatgtcatttttaagaaagagctgtttatatcttgttattggtatttgagctgtcca
ggattaaagcatcatgaccccagcctgtcatatttggaacaatatcagattgactgccag
caattcagagtattatatcacttgttgagtccctgggctcattctgcaaacagagactca
ctagcattatggacattcagattgttggatgagaactctgattgccttataaacttcaaa
gaattctcctctgcaattgatataatgtacaatggaagttttactgagaagctcaagctg
ctttttaagctgcatattcctccagcttataccgaagtgatgtctaagacttcttcaaag
gacgatcagctttcaacagaagaattactttatttcagtcagctccaggtttctaagcct
gcaaatgagaaggaaacagaatcgggaagaaatagccctgaaaaaggcaaaggaaaaatt
gatattcaagcctatttaagtcaatggcaagatgagcttctcaaaaaagaagaaaacatt
aaagatttaccaagaatgaatcagtcacaatttattcagttttcaaagaccctgtataat
ttatttcatgaggaccctgaagaggagtcactatatcaagccattgctattgtaaccaac
cttctgctcaggatggaagaagttggaaggaaactccatagcccagcatcatcagccaaa
ggatactccagtgcagcctgtgattctggacccagtgaagggaatgcagagagcagtgtg
aagaaagatcctttccctcccagggaagaaaatcagtggtcttttgcatttgagcagatt
cttgcttccctgttaaatgaaccagccttggtgagtttttttgagagacccttagattta
aaagtcaagctagaaaatgcgaaaagctcccagttaaggtctagaaccaagatgtaa
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