Mastomys coucha (southern multimammate mouse): 116088893
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Entry
116088893 CDS
T07224
Symbol
Myom1
Name
(RefSeq) myomesin-1 isoform X1
KO
K24495
myomesin
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116088893 (Myom1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mcoc04990
]
116088893 (Myom1)
Domain-containing proteins not elsewhere classified [BR:
mcoc04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
116088893 (Myom1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_2
Ig_DSCAM-DSCAML_C
ig
V-set
Pur_ac_phosph_N
Tissue_fac
C2-set_2
Ig_J_second
Ig_6
C2-set_3
Motif
Other DBs
NCBI-GeneID:
116088893
NCBI-ProteinID:
XP_031224577
LinkDB
All DBs
Position
Unknown
AA seq
1568 aa
AA seq
DB search
MSLPFYQRSHQHYDLSYRNKDLRTTMSHYQQEKKRSAVYTHGSTAYSSRSSAAHRQESEA
FSQASAAAYQQQASQAYSLGTSSSHHSQGSEVSRKTASAYDYGYSHGLTDSSLLVEDYSS
KMSPQTKRAKRSLLSGEETGNLPGNYMVPIYSGRQVHISGIRDSEEERIKEAAAYIAQRT
LLASEEAIAASKQSTASKRSTTSKQSMSTLQREETFEKKSRNVAIREKAEELSLRKTLEE
TQAYHGKLNEDHLLHAPEFIIKPRSHTVWEKENVKLHCSVAGWPEPRLTWYKNQVPINVH
ANPGKYIIESRYGMHTLEISKCDFEDTAQYRASAMNVQGEVSAYASVVVKRYKGELDESL
LRGGVSMPLSFAVTPYGYASKFEIHFDDKFDVSFGREGETMSLGCRVVITPEIKHFQPEV
QWYRNGVPVSPSKWVQPHWSGDRATLTFSHLNKEDEGLYTIRVRMGEYYEQYSAYVFVRD
ADAEIEGAPAAPLDVVSLDANKDYIIISWKQPAVDGGSPILGYFIDKCEVGTDTWSQCND
TPVKFARFPVTGLIEGRSYIFRVRAVNKTGIGLPSRVSEPVAALDPAEKARLKSRPSAPW
TGQIIVTEEEPTEGVIPGPPTDLSVTEATRSYVVLSWKPPGQRGHEGIMYFVEKCDVGTE
NWQRVNTELPVKSPRFALFDLVEGKSYRFRVRCSNSAGVGEPSETTEVTLVGDKLDIPKA
PGKIIPSRNTDTSVVVSWEESKDAKELVGYYIESSVVGSGKWEPCNNNPVKGSRFTCHGL
TTGQSYIFRVRAVNAAGLSEYSQDSEAIEVKAAIAVPSSPYDITCLESFRDSMVLGWKQP
DTTGGAEITGYYVNYREVVGGVPGKWREANIKAISDAAYKISNLKENTVYQFQVSAMNIA
GLGAPSVVSECFKCEEWTIAVPGPPHSLKLSEVRKNSLVLQWKPPVYSGRTPITGYFVDL
KEANAKDDQWRGLNEAAIANKYLRVQGLKEGASYVFRVRAINQAGVGKPSDLAGPVVAET
RPGTKEVVVNVDDDGVISLNFECDQMTPKSEFVWSKDYEPTEDSPRLDVENKGNKTKMTF
KDLGTDDLGTYSCDVTDTDGIASSYLIDEEEMKRLLALSQEHKFPTVPTKSELAVEILEK
GQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYT
FQIQDGKATGHSTLVLIGDVYKKLQKEAEFQRQEWIRKQGPHFAEYLSWEVTGECNVLLK
CKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGFYEVILKDDRGKD
KSRLKLVDEAFQDLMTEVCRKIALSATDLKIQSTAEGIRLYSFVCYYLDDLKVNWSHNGA
GIKYTDRVKSGVTGEQIWLQINEPTPNDKGKYIMELFDGKSGHQKTVDLSGQAFDEAFAE
FQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPTPEVSWLKNEKPLSSDD
HCSLKFEAGKTAFFTISGVSTADSGKYGLVVKNKYGSETSDFTVSVFIPEEEARKGASEP
AKGNQKSQ
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgcctttttatcagaggtcccaccagcactatgatctcagttaccggaacaag
gaccttcgcaccaccatgagccactaccaacaggagaagaagcgctctgcggtctacacc
catggctccactgcttacagcagccgttcctcagcggcacaccgccaggagtcagaggcc
tttagtcaagcatcagccgctgcctaccagcagcaggcctcacaggcctacagtcttgga
acatcatcatcccaccattctcaagggtctgaagtcagccggaagacagcctctgcgtat
gattatggctattcccatggacttacagattccagtctgctagtggaagattattcatcc
aagatgagcccccaaacaaagagagccaagcggagtcttctgtctggagaagagactgga
aacctaccaggcaactacatggtgcctatttactctggacggcaagtgcacatcagtgga
atcagagattcagaagaagaaagaattaaagaggctgctgcttacatagctcagaggact
ctccttgcgagtgaggaagcaatcgcggcctccaagcagtccacagcttccaaacggtcc
acaacctccaaacagtccatgtccacccttcaacgagaggaaacatttgaaaaaaaatcg
aggaacgttgcaattcgagaaaaggcagaagagctgtcgctgaggaaaacattagaagag
acccaagcatatcacggaaagctaaacgaagaccatctccttcatgctccggagtttatc
attaaacctcgttctcacacagtttgggagaaggagaacgtgaaattgcactgctcggta
gcaggctggccagaacctcgtctcacgtggtataagaaccaggtgcctataaatgtccat
gcaaacccgggaaagtacatcattgaaagtcgatatggaatgcatactcttgagatcagc
aagtgtgactttgaagacacggctcagtaccgggcctcggcaatgaatgtccaaggagag
gtctcagcatatgcctcagttgtggtaaagagatataagggggaattggatgagtctctc
ctccgtggtggggtttccatgcctctcagctttgctgtgaccccttacggttatgcatcc
aagtttgagatccacttcgatgataagtttgatgtgtcttttgggagagaaggagagacc
atgagtctgggctgtcgtgtggtcatcactcctgaaataaaacacttccagccagaggtc
cagtggtatagaaatggagtacctgtttctccatcaaaatgggtgcagccacactggagt
ggagatcgggcaacactcacgttctctcacctcaacaaagaagatgaaggtctctacaca
atccgcgtgcgaatgggagagtattacgaacagtacagtgcttacgtctttgttcgagat
gctgatgcagagatcgaaggagcccccgccgcacccttagatgtggtgtctttggatgct
aacaaggattacatcatcatctcttggaagcagccagctgtggatggaggaagcccaatc
ctgggatattttattgataagtgtgaggtgggcacagatacctggtctcagtgcaatgac
acacctgtgaaatttgctcggtttcccgtcactggtttgatagaaggccgttcctacata
ttcagagttcgagctgtgaataaaactggaataggcctgccgtctcgagtttctgagccg
gtggctgctctggatccagctgagaaagctagacttaaaagtcgtccttcagcaccctgg
actggacagatcattgtcactgaagaggaacctacagagggtgtcattcctgggcccccc
acagacctctctgtcaccgaggccacccggagctacgtagtgctgagctggaaaccccct
gggcagcgaggccatgagggcattatgtactttgtagaaaagtgtgatgtgggaacagaa
aactggcagcgtgtcaacacagaactcccagtgaagtctcctcgctttgctctgtttgac
ctggtggaggggaaatcttaccgcttccgtgtccgctgctcaaattcagcaggagttggt
gaaccctcggagacaactgaagtgaccctcgtaggggacaaacttgatatccccaaagcc
cctggtaaaatcatcccaagtagaaacacagatacatcagtggtggtttcttgggaggag
tccaaagatgccaaagaactggttggatactacatagagtccagtgttgttggctctggc
aagtgggaaccctgcaacaacaacccggtgaagggctcacgatttacttgccatggactg
acgactggccagagctatattttccgggtcagagcagtgaacgcagctggacttagcgaa
tattcccaggattcagaagccattgaagtcaaagctgctatcgcggtgccttcttcaccg
tatgacatcacttgccttgaaagttttcgtgactcaatggttcttggatggaagcagcca
gatacgactggaggggcagagattacaggctattatgtgaactatcgtgaggtggttggt
ggggtaccaggaaaatggagggaagccaacatcaaggccatcagcgatgcagcatacaag
attagcaacttgaaggaaaacacagtgtaccagtttcaagtgtcagcaatgaacatcgca
ggactgggagcaccctccgtggtgagcgagtgcttcaagtgtgaagaatggaccattgct
gttccgggaccaccacacagcctgaagctcagtgaagtcaggaagaactccctggttctt
cagtggaagcctccagtctactcaggccggactccaatcacgggttactttgtggacctg
aaggaagccaatgccaaagatgaccaatggcgaggacttaatgaggcagccattgcaaac
aagtacctgagggtgcaaggcctcaaagagggtgccagctatgtgttccgtgtgcgtgcc
atcaaccaggcaggcgttggaaagccctccgaccttgctggacctgttgtggctgaaaca
cgtccaggtaccaaagaggttgttgtgaatgtggatgatgatggagtcatttctttgaac
tttgaatgtgatcagatgactcccaagtcggaatttgtctggtccaaagattatgaacct
actgaagactctccacgattagacgtcgaaaacaaaggcaataagacaaaaatgaccttt
aaagatctggggacagatgacttgggcacctactcttgtgatgtgacagacactgatggg
atagcgtcaagctacctgatagatgaggaagaaatgaaacgtctgctcgccctcagccag
gagcacaagttcccaactgtcccaactaagtcagagttggcggttgaaattttggagaaa
ggtcaggtccggttttggatgcaggctgagaagctgtctggcaatgccaaagtcaactac
atatttaatgagaaggaaattttcgaggggccgaaatacaagatgcacatcgaccgaaac
acgggcatcattgaaatgttcatggagaagctacaggatgaggatgaagggacatacaca
ttccagattcaagatggaaaagcaaccggccattctactcttgttctcattggagatgtt
tataagaagctacagaaagaagctgaattccagcgacaagaatggatcaggaaacaaggc
ccacattttgctgagtatttgagctgggaagtgactggtgaatgtaacgtgttgttgaaa
tgcaaggtagcaaatattaaaaaagagactcacattgtatggtacaaagatgaacgggag
atctctgtggatgagaaacatgactttaaggatggcatttgtaccctgctcatcacagag
ttttccaagaaagatgctggattttatgaagttatcctgaaagatgaccgaggaaaagat
aagagcagattgaaacttgtggatgaagccttccaagacttgatgactgaagtatgcagg
aagatagctttgtctgccacggacctgaaaatccaaagcacagccgagggcatccggctg
tactcttttgtctgttattacctggatgacttgaaagttaactggtcccacaatggggct
gggattaagtacacggacagagtcaagagtggagtcaccggggagcagatctggctgcag
atcaatgagcccactcccaatgataaagggaagtacataatggagctctttgatggaaag
tctggacaccagaagacggtggatctctctggacaagcatttgatgaagcctttgctgaa
ttccagaggttaaaacaagctgccattgcagaaaaaaatcgggcccgggtgttgggcggt
ctccccgatgttgtcaccattcaagagggcaaggcacttaatctcacttgcaatgtatgg
ggtgacccgacccctgaggtgtcctggctgaaaaatgagaagccgctctcctctgatgac
cactgcagcctcaagtttgaggccgggaagaccgccttcttcaccatctcaggggtgagc
acagcggactccggcaagtacgggctggtggtgaagaacaaatatggctcggagaccagc
gacttcaccgttagtgtgttcatcccagaggaggaggcaaggaagggagcatcagagcct
gccaagggtaaccagaagtcccagtga
DBGET
integrated database retrieval system
