Mastomys coucha (southern multimammate mouse): 116089010
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Entry
116089010 CDS
T07224
Symbol
Cdh17
Name
(RefSeq) cadherin-17
KO
K06811
cadherin 17, LI cadherin
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09160 Human Diseases
09162 Cancer: specific types
05226 Gastric cancer
116089010 (Cdh17)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcoc04515
]
116089010 (Cdh17)
Cell adhesion molecules [BR:
mcoc04515
]
Cadherins
Major cadherins
116089010 (Cdh17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
RET_CLD1
He_PIG
RibLong
SKG6
Motif
Other DBs
NCBI-GeneID:
116089010
NCBI-ProteinID:
XP_031224633
LinkDB
All DBs
Position
Unknown
AA seq
827 aa
AA seq
DB search
MVSVQLPFLCLLTLYSTSGYGQEGKFSGPLKPMTFSIFEGQEPSQIIFQFKANPPAVTFE
LTGETDGIFKIEKDGLLYHTRALDRETRAVHHLQLAALDSHGAIVDGPVPIIIEVKDIND
NRPTFLQLKYEGSVRQNSRPGKPFLYVNATDLDDPATPNGQLFYQIVIQLPKINNVMYFQ
INNKTGAISLTPEGSQELDPVKNPTYNLVVSVKDMGGQNENSFSDTTSVDITVRENIWKA
PEPVEIRENLTDPHPIRITQVQWNDPGAQYSLVNKEKLPQFPFSIDQEGNIYVTQPLDRE
EKNSYVFFATAKDENGKPLAYPLEIHVKVIDINDNPPTCLSPMTVFEVQENEVLGSSIGI
FAAHDMDEADNINSILKYRLVDQTPKVPSDGLFLIDEYEGKVQLGKQSLKKQDSPQYNLT
VEVSDIDFKTLCSVQVNVIDINDQIPIFEVSDYGSKTLSEDTAIGTTILVIQATDADEPF
TGSSKILYKIVQGDTEGRLEVVTDPKTNTGYVKIKKSLDFETQPVTNIVFQAENPEPLVD
GVEYNASSFASFELIVTDVNEVPVFPQQIFQANVSEDAPIGTKVGNVTARDPEGLTVSYS
LKDNKRGWLKIDSVTGEIFSTAPLDRETESVYRVQVVATEVGGSSLSSTAYFHLALMDVN
DNPPRLAKDYTGLFFCHPLSAPGSLIFGATDDDQQSLRRPKFTFALGRESLQSDWEVSKI
NGTHARLSTKHTRFEERVYDIPILINDGGQPPMEGIVSLSVTFCQCVEGSCFRPAGKQDG
IPTVGMAVGILLTTFLVIGIILAVVFIRMRKDKVEDPQSPENKPLRS
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggtctctgtccagcttcccttcctgtgtcttctcacactttattcgaccagtggatat
ggccaagaagggaagttcagcggtcccctgaagcccatgacattctctatctttgaaggc
caagaaccaagtcaaatcatatttcagtttaaggccaaccctccagccgtgactttcgag
ctaacgggagagacagatggtatatttaagatagaaaaggatgggcttctgtatcacaca
agagccctggacagagaaacaagagcggttcatcatctgcagcttgcagccttggattct
catggagctatagtagacggcccagttcccatcatcatagaagtcaaggacatcaatgac
aaccgacccacgtttctccagttgaaatatgaaggctcagtgaggcagaactctcgccca
ggaaagcctttcttgtatgtcaatgccacagacctggatgatccggcaactcccaatggc
cagcttttttatcaaattgtcatccagcttcccaaaatcaacaatgttatgtactttcaa
atcaacaacaaaacaggggcaatatcgcttaccccagaaggatcccaggaattggatcca
gtgaagaatcctacctacaacctggtggtctcggtgaaggacatggggggccagaatgag
aattccttcagtgataccacatctgtggacattactgtcagagagaacatctggaaagca
ccagaacctgtggagattagagaaaacttgactgatcctcaccccatcagaatcactcag
gtgcagtggaatgacccaggggcccagtattccttagtcaacaaggagaagctgccacag
ttcccattctcgattgatcaagaaggaaatatctacgtgactcagcccttggaccgggag
gaaaagaactcgtatgttttctttgcaactgccaaggatgagaatggaaaaccactcgca
tatccgctggaaattcatgtgaaagttattgacattaatgacaacccaccgacatgtctg
tctccaatgactgtatttgaagtccaggagaatgaagtattgggtagcagcatcgggatc
tttgctgcccacgatatggatgaagctgacaatatcaacagtattttgaagtacagactt
gtagaccaaacacccaaagttccttcagatggactctttctcattgatgaatatgagggg
aaagtccagttgggcaaacagtccttgaagaagcaggacagtcctcagtacaacttaaca
gtggaggtgtcggacatagatttcaagactctctgttctgttcaagtcaacgttattgat
atcaatgatcagattcccatctttgaagtatcagactatggaagcaagactctctctgaa
gacacagccatcggaaccaccatcttagtcatccaagctacagatgctgatgagcccttt
acagggagctctaaaattctgtacaagattgtacagggagacactgagggaagactggaa
gttgtcacagatcccaagaccaatacaggatatgtcaagatcaaaaagtctcttgatttt
gaaactcaaccagttaccaacattgttttccaagccgaaaaccctgagccactggtggat
ggtgtagagtacaatgctagttcttttgcctccttcgagctgattgtgacggatgtgaat
gaagtgcctgtattcccccagcaaatattccaagcaaacgtcagcgaggatgcccctata
ggcacaaaagtgggcaacgtgactgccagggatcctgaaggacttactgtgagttattca
ctgaaagacaacaagagaggctggcttaaaatcgactctgtcacgggtgagatatttagc
actgctccgctggacagggaaacagaaagtgtgtatcgagtacaagtggtggccactgaa
gtaggtgggtcctctctgagttctacggcatatttccacctggctctcatggatgtgaat
gacaacccccctcgcctagctaaggattacacaggcttgttcttctgccatcccctcagt
gcccctgggagcctcatctttggggccactgatgatgaccagcagtcacttcggaggccc
aagtttacatttgcccttggccgagaaagcttacaaagtgattgggaagtttctaaaatc
aatggtacacatgctcgactctctaccaagcacacacgctttgaggaacgagtttatgac
atcccaatcctcatcaatgatgggggacagccacccatggaagggattgtctccctatca
gttactttctgccagtgtgtggaaggaagctgtttccggccagcaggcaaacaggatggg
atacccactgtgggcatggcggtcggtatacttctgaccacatttctggtcattggtata
attttagcggttgtattcatccgcatgaggaaagataaagttgaagatcctcagtcccct
gagaataagcctctgagaagctga
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