Mastomys coucha (southern multimammate mouse): 116089020
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Entry
116089020 CDS
T07224
Symbol
Atg4a
Name
(RefSeq) cysteine protease ATG4A isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04136
Autophagy - other
mcoc04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116089020 (Atg4a)
04136 Autophagy - other
116089020 (Atg4a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mcoc01002
]
116089020 (Atg4a)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116089020 (Atg4a)
03029 Mitochondrial biogenesis [BR:
mcoc03029
]
116089020 (Atg4a)
Peptidases and inhibitors [BR:
mcoc01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
116089020 (Atg4a)
Membrane trafficking [BR:
mcoc04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
116089020 (Atg4a)
Mitochondrial biogenesis [BR:
mcoc03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
116089020 (Atg4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
116089020
NCBI-ProteinID:
XP_031224642
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All DBs
Position
X:134116107..134166259
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AA seq
399 aa
AA seq
DB search
MESVMSKYENQIIIPTDYPEEFPDTDELVWILGKQHLLKTEKSKLLSDISTRLWFTYRRK
FSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWNWERQKEQPKEYQRILQCFLD
RKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVIKKLALFDEWNSLAVYVSMDNTVVIE
DIKKMCCVLPVGAADTAGESPPDFLTASNQSKSTSAPCPAWKPLLLIVPLRLGINQINPV
YIEAFKECFKMPQSLGALGGKPNNAYYFIGFLGNELIFLDPHTTQTFVDTEESGLVDDQT
FHCLQSPHRMSILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHPSHW
PPFVPPAKPEVTTTGAEFIDSTEQLEDFDLEEDFEILSV
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagttatgtccaagtatgaaaaccagattattattcccactgactacccagaa
gaattcccggatacagatgagctggtatggattctggggaagcagcatctccttaagaca
gaaaaatctaagctgttgtctgatataagtactcgtctatggtttacatacagaaggaaa
ttttcaccaattgggggaacaggcccttcatctgatgctggctggggatgtatgctgcgc
tgtgggcagatgatgctggctcaagccctcatctgcagacacttgggaagggattggaac
tgggagagacaaaaagaacaacccaaagaataccaaaggatactgcagtgtttcctagat
agaaaagactgttgctattcaatccatcagatggcacaaatgggtgtaggagaagggaaa
tcaattggcgaatggtttggaccaaatacggttgcacaggtgataaaaaaactcgcttta
tttgatgaatggaattccttggctgtttatgtttcaatggataacacagtggtcatcgaa
gatatcaagaaaatgtgctgtgttcttcctgtgggtgctgctgatacagctggtgagagc
cctcctgattttctgactgcttccaatcagagtaaaagcacctctgccccatgcccagcc
tggaaacccctgctgctcattgtgccccttcgcctgggcataaaccaaatcaatcctgtg
tatattgaagcattcaaagagtgttttaagatgccacagtctttaggggctttaggagga
aagccaaataacgcctattatttcataggattcttaggcaatgagctcattttcttggac
cctcacacaacccagacctttgttgacactgaagagagtggactagtagacgaccagact
ttccattgcctgcagtctccacataggatgagtatcctgaacttggatccttctgtggcc
ttgggatttttctgcaaagaagagaaagactttgataattggtgtagccttgttcagaag
gaaattctaaaggagaatttgaggatgtttgaattagttcagaaacacccatcacactgg
cctccctttgtacctccagccaagccagaagtgacaaccacaggggcagaattcatagac
tctactgaacaactggaggactttgacctggaggaagattttgagattctgagtgtgtag
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