Mastomys coucha (southern multimammate mouse): 116089720
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Entry
116089720 CDS
T07224
Symbol
Vim
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04820
Cytoskeleton in muscle cells
mcoc05169
Epstein-Barr virus infection
mcoc05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116089720 (Vim)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
116089720 (Vim)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
116089720 (Vim)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcoc03019
]
116089720 (Vim)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mcoc04812
]
116089720 (Vim)
04147 Exosome [BR:
mcoc04147
]
116089720 (Vim)
Messenger RNA biogenesis [BR:
mcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
116089720 (Vim)
Cytoskeleton proteins [BR:
mcoc04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
116089720 (Vim)
Exosome [BR:
mcoc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116089720 (Vim)
Exosomal proteins of other cancer cells
116089720 (Vim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
TolA_bind_tri
DUF7491
GeBP-like_DBD
RBD-FIP
TPR_MLP1_2
DUF4515
Motif
Other DBs
NCBI-GeneID:
116089720
NCBI-ProteinID:
XP_031224906
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MSTRSVSSSSYRRMFGGSGSSSRPSSNRSYVTTSTRTYSLGSALRPSTSRSLYSSSPGGA
YVTRSSAVRLRSSVPGVRLLQDSVDFSLADAINTEFKNTRTNEKVELQELNDRFANYIDK
VRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLAE
DIMRLREKLQEEMLQREEAESTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHDE
EIQELQAQIQEQHVQIDVDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSE
AANRNNDALRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFALEAANYQD
TIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPNFSS
LNLRETNLESLPLVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaggtccgtgtcctcgtcctcatatcgcaggatgttcggtggctccggctca
tcgagccggccgagttccaaccggagctatgtgaccacatccacccgcacctacagcctg
ggcagcgctctgcgccccagcactagccgcagcctctattcctcgtcccccggtggcgcc
tatgtgacccgatcctccgccgtgcgcctgcggagcagcgtgccgggcgtgcggctgctg
caggactcggtagacttctccctggccgacgccatcaacactgagttcaagaacactcgc
accaacgagaaggtggaactgcaggagctgaatgaccgctttgccaactacatcgacaag
gtgcgcttcctcgagcagcagaacaaaatcctgctggccgagctcgagcagcttaagggc
cagggcaagtcgcgcctgggcgacctctacgaggaggagatgcgggagctacgccggcag
gtggatcagctcaccaacgacaaggcccgtgtcgaggtggagcgggacaacctggcggag
gacatcatgcggctgcgagagaaattgcaggaggagatgctccagagagaggaagctgag
agcaccctgcagtcattcagacaggatgttgacaatgcttctctggcacgtcttgatctt
gaacggaaagtggaatccttgcaggaagaaattgcctttttgaagaaactgcacgatgaa
gagatccaggagctgcaagcccagattcaggagcagcatgtccagatcgatgtggatgtc
tccaagcctgacctcacggctgccctgcgtgatgtccgccagcagtatgaaagcgtggct
gccaagaacctccaggaggccgaggaatggtacaagtccaagtttgctgacctctctgag
gctgccaaccggaacaacgatgccctgcgccaggcaaagcaggagtccaatgaataccgg
cgacaggtgcagtccctcacctgcgaagtggatgcccttaaaggcactaatgagtccctg
gagcgccagatgcgtgagatggaagagaattttgcccttgaagctgctaactaccaggac
actatcggccgcctgcaggatgagatccagaacatgaaggaagagatggctcgtcacctt
cgtgaataccaagacctgctcaatgttaagatggcccttgacattgagatcgccacctac
aggaagctgctggaaggcgaggagagcaggatttctctgcctcttccaaatttttcttcc
ctgaacctgagagaaactaatctggagtcacttcctctggttgacacccactcaaaaaga
acactcctgattaagacggttgaaaccagagatggacaggtgatcaatgagacttctcag
catcatgatgaccttgaataa
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integrated database retrieval system
