Mastomys coucha (southern multimammate mouse): 116089818
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Entry
116089818 CDS
T07224
Symbol
Abca2
Name
(RefSeq) ATP-binding cassette sub-family A member 2 isoform X1
KO
K05642
ATP-binding cassette, subfamily A (ABC1), member 2
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc02010
ABC transporters
mcoc04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116089818 (Abca2)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
116089818 (Abca2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mcoc02000
]
116089818 (Abca2)
Transporters [BR:
mcoc02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
116089818 (Abca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
Motif
Other DBs
NCBI-GeneID:
116089818
NCBI-ProteinID:
XP_031225205
LinkDB
All DBs
Position
Unknown
AA seq
2435 aa
AA seq
DB search
MGFLHQLQLLLWKNVTLKRRSPWVLAFEIFIPLVLFFILLGLRQKKPTISVKEVSFYTAA
PLTSAGILPVMQSLCPDGQRDEFGFLQYANSTVTQLLERLNRVVEEGNLFDPVQPSLGSE
LEALRQRLEALSSGPGTWESHSTRPAVSSFSLDSVARDQRELWRFLMQNLSLPNSTAQAL
LAARVDPSEVYRLLFGPLPELDGKLGFLRKQEPWSHLGSNPLLQMEELLLAPALLEQLTC
APGSGELGRILTMPEGDQVDLQGYRDAVCSGQATARAQRFSDLATELRNQLDTAKIAQQL
GFNVPNGSDPQPQAPSPQSLQALLGDLLDAQKVLQDVDVLSALALLLPQGACAGRASAPQ
ASSLNGLANSTGISANAGSNTTVEEDTQSPVTPASPDTLQGQCSAFVQLWAGLQPILCGN
NRTIEPEALRRGNMSSLGFTSKEQRNLGLLVHLMTSNPKILYAPAGSEADRVILKANETF
AFVGNVTHYAQVWLNISTEIRSFLEQGRLQQHLHWLQQYVADLRLHPEAMNLSLEELPPA
LRQDNFSLPNGTALLQQLDTIDNAACGWIQFMSKVSVDIFKGFPDEESIVNYTLNQAYQD
NVTVFASVIFQTRKDGSLPPHVHYKIRQNSSFTEKTNEIRRAYWRPGPNTGGRFYFLYGF
VWIQDMMERAIINTFVGHDVVEPGNYVQMFPYPCYTRDDFLFVIEHMMPLCMVISWVYSV
AMTIQHIVAEKEHRLKEVMKTMGLNNAVHWVAWFITGFVQLSISVTALTAILKYGQVLMH
SHVLIIWLFLAVYAVATIMFCFLVSVLYSKAKLASACGGIIYFLSYVPYMYVAIREEVAH
DKITAFEKCIASLMSTTAFGLGSKYFALYEVAGVGIQWHTFSQSPVEGDDFNLLLAVTML
MVDTVVYGVLTWYIEAVHPGMYGLPRPWYFPLQKSYWLGSGRTEAWEWSWPWAHAPRLSV
MEEDQACAMESRHFEETRGMEEEPTHLPLVVCVDKLTKVYKNDKKLALNKLSLNLYENQV
VSFLGHNGAGKTTTMSILTGLFPPTSGSATIYGHDIRTEMDEIRKNLGMCPQHNVLFDRL
TVEEHLWFYSRLKSMAQEEIRKEMDKMIEDLELSNKRHSLVQTLSGGMKRKLSVAIAFVG
GSRAIILDEPTAGVDPYARRAIWDLILKYKPGRTILLSTHHMDEADLLGDRIAIISHGKL
KCCGSPLFLKGAYGDGYRLTLVKRPAEPGTSQEPGLASSPSGRSQLSSCSEPQVSQFIRK
HVASSLLVSDTSTELSYILPSEAVKKGAFERLFQQLEHSLDALHLSSFGLMDTTLEEVFL
KVSEEDQSLENSEADVKESQKDVLPGAEGLTAVGGQSGNLARCSELAQSQASLQSASSVG
SARGDEGTGYSDGYSDYRPLFDSLQDPDNVSLQEAEMEALAQVGQGSRKLEGWWLKMRQF
HGLLVKRFHCARRNSKALCSQILLPAFFVCVAMTVALSVPEIGDLPPLVLSPSQYHNYTQ
PRGNFIPYANEERREYRLRLSPDASPQQLVSTFRLPSGVGATCVLKSPANGSLGPMLNLS
SGESRLLAARFFDSMCLESFTQGLPLSNFVPPPPSPAPSDSPVSPDEDSLQAWNMSLPPT
AGPETWTSAPSLPHLVRESVRCTCSAQGTGFSCPSSVGGHPPQMRVVTGDILTDITGHNV
SEYLLFTSDRFRLHRYGAITFGNVQKSIPASFGARAPPMVRKIAVRRVAQVLYNNKGYHS
MPTYLNSLNNAILRANLPKSKGNPAAYGITVTNHPMNKTSASLSLDYLLQGTDVVIAIFI
IVAMSFVPASFVVFLVAEKSTKAKHLQFVSGCNPVIYWLANYVWDMLNYLVPATCCVIIL
FVFDLPAYTSPTNFPAVLSLFLLYGWSITPIMYPASFWFEVPSSAYVFLIVINLFIGITA
TVATFLLQLFEHDKDLKVVNSYLKSCFLIFPNYNLGHGLMEMAYNEYINEYYAKIGQFDK
MKSPFEWDIVTRGLVAMTVEGFVGFFLTIMCQYNFLRQPQRLPVSTKPVEDDVDVASERQ
RVLRGDADNDMVKIENLTKVYKSRKIGRILAVDRLCLGVRPGECFGLLGVNGAGKTSTFK
MLTGDESTTGGEAFVNGHSVLKDLLQVQQSLGYCPQFDALFDELTAREHLQLYTRLRGIP
WKDEAQVVKWALEKLELTKYADKPAGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDP
KARRFLWNLILDLIKTGRSVVLTSHSMEECEALCTRLAIMVNGRLRCLGSIQHLKNRFGD
GYMITVRTKSSQNVKDVMRFFNRNFPEAMLKERHHTKVQYQLKSEHISLAQVFSKMEQVV
GVLGIEDYSVSQTTLDNVFVNFAKKQSDNVEQQEAEPSTLPSPLGLLSLLRPRPAPTELR
ALVADEPEDLDTEDEGLISFEEERAQLSFNTDTLC
NT seq
7308 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcctgcaccagctgcagctgctgctctggaagaacgtgacgctgaagcgccgg
agcccgtgggtcctggcttttgagatcttcatcccgcttgtcctcttcttcatcctgttg
ggactgcggcagaagaagcccaccatctctgtgaaggaagtctctttctacaccgcagca
ccgctgacatcggcaggcatcctgcccgtcatgcagtcgctttgccctgatggccagcgt
gatgagtttggcttcctgcaatatgccaactccacggtcacccagcttctggaacgcctc
aaccgtgtagtggaggagggcaacttatttgacccagtgcaacccagcttgggctcagag
cttgaggccctgcgccaacgtctggaggccctcagctcaggccctggcacctgggagagc
cactcaaccagacctgcagtttcatccttctctctggactcggtggccagggaccagaga
gagctttggcgtttcctgatgcagaacctgtcgctgcccaacagcacagcccaggccctc
ctggctgctcgtgtggacccttctgaggtctaccgcttgctttttggtcctttgcctgag
ctggatggaaagttaggtttcctcaggaagcaggagccctggagccacctgggtagcaat
cctttgttgcaaatggaggagctgctgctggctcctgcccttttggaacagctcacatgt
gctccaggctctggggagctgggccggattcttaccatgcctgagggtgatcaggtagac
cttcagggctaccgggatgctgtctgcagtgggcaggctacagctcgtgcccagcgcttc
agtgatctggccactgagctccggaaccagctggacacagccaagattgcccagcagctg
ggcttcaatgtccccaacggctcagatccccagccacaggcaccatccccacagagcctg
caggcactcttaggggacctgctggatgcccagaaagttctgcaggatgtggacgtccta
tcagcccttgccctgctgctgcctcaaggtgcctgtgctggccgggcctctgcacctcaa
gctagcagcctgaatggcctggccaacagcacggggatcagcgcaaatgcaggttccaac
accaccgttgaggaggacacccagtcacctgtcaccccagcctctccggacactctgcaa
ggccagtgctcagcctttgtgcagctctgggctggcttgcagcccatcttgtgtggcaac
aaccgcaccattgagcctgaagcacttcggaggggcaacatgagctccctgggctttaca
agcaaagaacaacggaacttgggccttcttgtgcacctcatgaccagcaacccaaaaatc
ctgtatgcaccagcaggctctgaagctgaccgcgttatcctcaaggcaaatgagaccttt
gccttcgtgggcaatgtgacacactacgcccaggtctggctcaacatctctacagagatc
cgaagcttcttggagcaaggcaggctgcagcagcatctgcactggctgcagcagtatgta
gctgatcttcggctgcatcctgaagcaatgaacctgtccctggaggagctgccacctgct
ctgcgtcaggacaacttctcactgcccaatggcacagccctcctgcaacaacttgacaca
atagacaacgcagcctgtggctggatccagttcatgtccaaggtgagtgtggacattttc
aaaggatttcctgatgaggagagcatcgtgaactacactctcaatcaggcctaccaggac
aatgtcacagtgtttgccagtgtgatcttccagacacggaaggatggctccctccctccc
catgtacattataagatccgccagaattcaagcttcacagagaaaaccaacgagattcgc
cgtgcttattggcgcccagggcccaacactggtggtcgcttctacttcctctatggcttc
gtctggatccaggatatgatggagcgtgccatcatcaacacatttgtggggcatgacgtg
gtcgagcctggtaactacgtacagatgttcccgtacccctgctacacccgtgatgacttc
ctgtttgtaattgagcacatgatgccactgtgcatggtgatctcctgggtctactctgtg
gccatgaccatccagcatatagtggcagagaaagagcataggctcaaggaggtaatgaag
acaatgggcctgaacaacgccgtgcactgggtggcctggttcatcacaggctttgtgcag
ctgtccatctccgtgacagctctgactgccatcctcaagtatggccaggtgctcatgcac
agccacgtgcttattatctggctcttccttgctgtctatgctgtggccactatcatgttt
tgcttcctggtatctgtgctgtactctaaggctaagttggcctcagcctgtggcggcatc
atctacttcctgagctacgttccctacatgtatgtagcaatccgtgaggaagtagcccac
gataagatcactgccttcgagaagtgcattgcgtccctgatgtccacaacagcctttggc
ctgggttccaagtactttgcactgtatgaagtggcaggagtgggcatccagtggcacacg
ttcagccagtccccagtggaaggggatgacttcaacctgctccttgctgtcaccatgctg
atggtggacacggtggtctacggtgtgctcacttggtacatcgaggctgtgcacccaggt
atgtatgggctgccacggccctggtacttcccgctacagaagtcctattggctgggcagt
gggcggacggaggcctgggagtggagctggccgtgggcacatgcaccgcgcctcagtgtt
atggaagaggaccaggcctgtgccatggagagccggcacttcgaggagacccgaggtatg
gaggaggagcccacccacctgcccttggtcgtctgtgtggacaagctcaccaaggtctat
aagaatgacaagaagctggccttaaacaaactgagcctcaatctctatgagaaccaggtg
gtctctttcctaggccacaacggggctggcaagactactaccatgtcgatcttgactgga
ctgttcccacccacgtcgggctcagccactatctatgggcatgacatccgcacagagatg
gatgagatccgcaagaacctgggcatgtgcccacagcacaatgtgctctttgaccggctc
accgtggaggaacacctctggttctactcacgcctcaaaagcatggcacaggaggagatc
cgcaaagagatggacaagatgattgaggacctggagctctccaacaagcggcactcgctg
gtacagacactgtctggaggcatgaagcgcaagctttcagtagccattgcctttgtgggt
ggctctagagccattatcttagatgagcccacagctggcgtggatccctatgctcgccgt
gctatctgggacctcattctgaagtacaagccaggccgcactatcctcctgtccacccat
cacatggatgaagccgacctgctgggggatcgcattgccatcatctcccatggaaagctc
aaatgctgtggctctcccctcttcctcaagggtgcctatggtgatgggtaccgcctcaca
ttggtcaagcgtcctgcagaacctggcacctcccaagagccagggctggcttccagcccc
tcaggtcgttctcagctgagcagctgctcagagcctcaggtgtcccagttcatccgcaag
catgtggcttcctccctgctggtctcagacacgagcactgagctctcctacatcctgccc
agtgaggccgtcaagaaaggggccttcgagcgcctctttcagcaactggagcacagcctg
gatgcactgcatctgagcagttttgggctgatggacacaactctggaggaggtgttcctc
aaggtatctgaagaagaccagtcactggagaacagcgaggccgatgtgaaagagtcccag
aaggatgtgctgcctggggcagagggcctgacagctgtagggggtcaatctggcaacctg
gctcggtgctcagagctggcacagtcacaggcatcactgcagtctgcatcctctgtgggc
tctgcccgcggggatgagggcactggctactccgacggctacagtgactaccgtcccctc
tttgacagcttgcaggacccagacaatgtcagcttacaagaggcagaaatggaggccctg
gcgcaggtgggccagggcagccgcaagctagagggctggtggctgaagatgcggcagttc
catgggctcctggtgaagcgcttccactgtgctcgtcgaaactccaaagctctctgctct
cagattctgctgcctgcctttttcgtctgtgtggccatgaccgtggcattgtctgtccct
gagatcggtgaccttcctccactggtcctgtcaccttctcagtaccacaactacacccag
ccccgtggcaactttatcccctatgccaatgaggaacgcagggagtaccgattacggctg
tcacctgatgccagcccccagcagctggtgagcacattccggctgccctctggtgtagga
gccacttgtgtgctcaagtctcctgccaacggctccctggggcccatgctgaatttaagc
agtggagagtcccgcctgctggctgcacggttctttgatagtatgtgcctggagtctttc
acacaggggctgccactgtccaactttgtgccacccccaccctcgcccgccccttccgac
tcacccgtatccccagatgaggattcactgcaagcctggaacatgtccctgccacctact
gctggaccagagacgtggacgtcggcgccttctctgccacacctagtgcgtgagtcagtc
cgctgtacctgctctgcacagggcacgggcttctcatgccccagcagtgtgggtggacac
ccaccccagatgagagtggttacaggtgacatcctgactgacatcactggccacaatgtt
tctgagtacctgctcttcacctctgaccgtttccgactacaccgatatggagccatcacc
tttggtaatgtccagaagtctatcccagcatcctttggtgcccgggcccctcctatggtg
cggaagattgcagtgcggagggtggctcaggtgctctacaataacaagggctaccacagc
atgcccacctacctcaacagcctcaacaatgccattctgcgtgcaaatctacccaaaagc
aagggcaatccagcagcctatggcatcaccgtcaccaaccaccccatgaacaagaccagt
gctagcctctccctggattacctactgcagggcacagatgtggtcatcgccatcttcatc
attgtggccatgtccttcgtgccagccagctttgtggtcttccttgtggcagagaaatcc
accaaggccaaacacctacagtttgtcagcgggtgcaaccctgtcatctactggctggcc
aactacgtgtgggacatgctcaattacttggtcccagccacctgctgtgtgatcatcctc
tttgtctttgacttaccggcctatacgtcacccaccaacttccccgcggtgctctccttg
ttcctgctctacgggtggtctatcacacccatcatgtacccagcctccttctggtttgag
gtccctagctcagcctacgtgttcctcatcgtcatcaacctcttcattggcatcacggcc
acggtggccaccttccttctgcagctttttgagcatgacaaggacctgaaggttgtcaac
agttacctgaaaagctgcttcctcatcttccccaactacaacctgggccacggactcatg
gagatggcctataatgagtacatcaatgaatactatgccaagattggccagtttgacaag
atgaagtccccgtttgagtgggacattgtcacacgtggactggtggccatgacagttgag
ggcttcgtgggattcttcctcaccatcatgtgccagtataacttcctgcggcagccacaa
cgcctgcctgtgtctactaaacctgtggaagatgatgtggatgtggctagtgagcgacag
agagtgctccgcggtgatgccgacaatgacatggtcaagatcgagaacctgaccaaggtg
tacaagtctcggaagattggccgtatcctggcagtggaccgcctttgcctgggtgtgcgc
ccgggagagtgctttgggctccttggcgtcaatggtgcagggaagaccagcaccttcaag
atgctgactggagatgagagcacaacagggggcgaggcctttgtcaatggacacagtgtg
ctcaaggacctgctccaggttcagcagagccttggctactgcccgcagtttgatgccctg
tttgatgagctcacagctcgtgaacacctgcagctgtacactcggctgcgtggcatcccc
tggaaggatgaggcccaggtggtgaagtgggccttagagaagctggaactgacaaagtat
gcagacaagccagctggcacctacagtggaggcaacaaacggaagctttccacagccatt
gccctcattgggtaccctgccttcatctttctagatgagcccaccactggcatggaccct
aaggcccggcgcttcctgtggaacctcattctggacctcatcaagacaggacgttcggtg
gtgctgacatcacacagcatggaggagtgtgaggctctgtgcacacggctggccatcatg
gtgaatgggcggctgcgctgcctgggcagcatccagcacctcaagaacaggtttggggat
ggctatatgatcactgtaaggaccaaaagcagccagaatgtgaaagatgtaatgcggttc
ttcaaccggaacttcccagaggccatgctcaaggaacggcaccatacaaaggtacaatac
cagctcaagtcggagcacatctcgctggctcaggtgttcagcaagatggagcaggtggtg
ggcgtgctgggcatcgaggattactcagtcagccagaccaccctggataacgtgtttgtg
aactttgcgaagaagcagagtgataatgtggagcagcaagaagctgagccctcgaccttg
ccatccccccttggactactcagcctgctgaggccccgccctgcacccacagagctccgg
gcactggtggctgatgagcctgaggacctggacacagaggatgagggcctcatcagcttc
gaggaagaacgggcccagctctccttcaacaccgacacgctctgctga
DBGET
integrated database retrieval system
