Mastomys coucha (southern multimammate mouse): 116089846
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Entry
116089846 CDS
T07224
Symbol
Sec16a
Name
(RefSeq) protein transport protein Sec16A isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116089846 (Sec16a)
Membrane trafficking [BR:
mcoc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
116089846 (Sec16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
116089846
NCBI-ProteinID:
XP_031225273
LinkDB
All DBs
Position
Unknown
AA seq
2373 aa
AA seq
DB search
MQPPPQAVPSGVAGPPPAGNPRSMFWANSPSASNNAPVAPITHPLQPVTDPFAFNRQTLQ
NTPVGSSSKSSLPNLPGPAPSVFSQWPGLPMPPTNAGDSSTGLHEPLSGTLSQPRADPSL
FPPASTPSSLSGLEVSRNAEVDSSSGPEVQMLPHPPHYIPGVGPEQPHGGHLNDSGSGPG
QPMNRHAPHDGAVAHAALPFFPQPQMPGQWGPLQGGPQPSSQHHSPCLERPVQNMGPQAA
SLPHFPSPSSLHQGPGHESHVPQTFTPVSLASGEGNEIVHQQSKNHPLSSFPSKHTFEQN
SRVGNMWASPEFRQNPGVNKEHLLDPAHVNPFTQENSPENQVHHPPVAATNHALQEAASG
ALSMFFQGEETENEENLSSEKTGLDDRLDLDSFSSPSRLGHPPPPGAGGVYQAFLKGPSS
ETAQEGDVQPYFSQSVGICLEKQTTTTPANDTWGDIPGAGTHCASGPQCENVENLEFVQN
QEVLPRETLNVDPFSLSDQIRYGPLPGPAASRPVTMGLARGGGLNLEAPDIPLHPTRPDS
VSSSYSSHSHRSPPGSARPQELVGTFIQQEVGKLEDDTSGSFFKQIDSSPVGGETDEVIG
SQNYCSSLSQPSTPSPPKPTGVFQTSANSSFEPVRSHLVGVKPVEADRANMVVEVRGTRN
CQKKRRAAVIPPDAIPGNLEQPPDNMETLCTPQACPLPLSTSGEAGQLVSHTAGPPLDAV
RPVPDKRPSARAQKCESPATTLWAQNELPDFGGNVLLAPAAPALYVPVKPKPSEVVHHPE
KGMSGQQSWKQGSVPPLQNQDPPGASENLENPPEVGEEEALPLQASSGYASLLSSPPTES
LHNQPVVIAQPDQSYNLAQPINFSVSLLNPNEKNQSWGDAVVGEKAMVSNSRALSGDSEE
HAALSGIPTSAVTGSSLPSSITQSCAPRSSGSSEMIASQPASWLVQQLPPQIPQSQHPNA
EKVPSEFVNSPAGNTSVMLVPPANSTLVPNSNKADHSSNQEEAVGALDFTLNRTLENPVR
MYSPSHSDGPASQQPLVNHPKQSGPGLHNQDHFYQQVTKDAQDQYKLERAQPELVPPRPQ
NSPQQVPEAACPEPSNPDSPPTQGQSESLAQPPASPAPINTGQLLPQPPQSSSASVTSTN
SSQAAVRSEQPWLHPPLPNTFGPAPQDLASYYYYRPLYDAYQSQYPSPYPSDPGTASLYY
QGMYGLYEPRYRPYDSSASAYAENHRYSEPERPSSRASHYSDQLTPRQGYPEGYYNSKSG
WSSHSDYYANYYSGQYDYGDPSRWDRYYGSRFRDPHTWDRRYWYDSEHDPYRKDHYAYSD
RPEKCDDHWRYDPRFTGSFDDDTELHRDPYGEEIDRRSIHSEHSARSLRSTHSLPSRHSS
LSSHSHQSQIYRSHNVTGGSFEAPHAPGSFHGDYAYGTYASNFSGAHGFPEYSYPADTSW
PTVEQVPSRPTSPEKFTVPHVCARFGPGGQLLKVVPNLPSEGQPALVEIHSLETLLQHTP
EQEEMRSFPGPLGKDDTHKVDVINFAQNKATKCLQNESLIDKESASLLWNFIILLCRQNG
TVVGTDIAELLLRDHRTVWLPGKSPNEANLIDFTNEAVEQVEEEESGEAQLSFLTDSQTV
TTSVLEKETERFRELLLYGRKKDALESAMKNGLWGHALLLASKMDSRTHARVMTRFANSL
PINDPLQTVYQLMSGRMPAASTCCGDEKWGDWRPHLAMVLSNLNNNMDVESRTMATMGDT
LASKGLLDAAHFCYLMAQVGFGVYTKKTTKLVLIGSNHSLPFLKFATNEAIQRTEAYEYA
QSLGAHTCPLPNFQVFKFIYLCRLAEMGLATQAFHYCEVIAKSVLTQPGAYSPVLISQLT
QMASQLRLFDPQLKEKPEEESFVEPAWLVQLQHVERQIQEGTVLWSQDGTEPQQCHITSG
SEVEQSDGPGLNHQTGPRADNPLLMPSTEPLMHGVQLLPTAPQTLPDGQPAHLARVPMFP
VPMSHGPLELSPAYGPPGSVLGFPESSRSDPTVLHPGQALPPTTPGLQESGPPLQEASSP
DPEVVPRGSPVRHSPPELSEEELGENLADLGSSRTAQDLESSPVWGLGSSNLTHAPSLTP
DSEGKKPAQAVKKEPKEPKKTESWFSRWLPGKKRTEAYLPDDKNKSIVWDEKKNQWVNLN
EPEEEKKAPPPPPTSFPRVPQVTPTGPTGPPTASVNVFSRKAGGSRARYVDVLNPSGTQR
SEPALAPADFFAPLAPLPIPSNLFVPNPDAEEPQPADGTGYRGQAPAGTQSKAEPTLEPK
VVSSTVSAPGPELLPSRPDGSQGGELSRCSSLSSLSQEVSRHFHQGPGDHCPVGAPPGGS
VPFYNPAQLVQASVTSGNSRPGRIGQRKYAALN
NT seq
7122 nt
NT seq
+upstream
nt +downstream
nt
atgcagccaccacctcaggcagtcccatctggtgtggctggaccacccccagctgggaat
cctcggagcatgttctgggccaacagcccttcagccagtaataatgcaccagtggctccc
ataacacacccattgcagccagtaacggatccgtttgcttttaatagacagactcttcaa
aacacaccagtgggaagttcatccaaaagcagcctgcccaatttgcctggcccagccccc
tctgttttttctcagtggcctggtttgcctatgcctcccacaaatgctggggatagctcc
acaggactgcatgagcctctgtcaggaactttgtcacagcctagagcagatcccagtcta
tttcctcctgcatctaccccttcttcactgtctgggctggaagtgagcaggaatgctgag
gttgactccagttcaggacctgaagttcagatgctgccacatccacctcactacattcca
ggagtgggtcctgagcaacctcacgggggccatctgaatgacagtggttctgggcctggc
caacccatgaataggcacgccccacatgatggtgctgtggcccacgcagcattgcctttc
ttccctcagccacagatgccaggtcagtgggggcctttacaaggaggccctcagccctcc
agtcagcatcactcgccctgcctggagagacctgttcagaacatggggccccaggctgcc
agcttgccccattttccctctccatctagtctacaccagggacctggccatgagtctcat
gtcccacaaacgtttactccagtatccttggccagtggtgaagggaatgagatagtccac
cagcaaagtaaaaatcaccctttgagtagcttcccctctaaacacacttttgagcagaat
tctagagttgggaatatgtgggcaagcccagagttcaggcagaatccaggagtgaataaa
gagcatctgctagatcctgcccatgtgaatcccttcactcaggaaaatagccctgaaaac
caggtgcaccatccccctgtggctgcaactaaccatgccctgcaagaagcagcctctgga
gctctctcaatgttttttcaaggggaggagacagagaatgaggaaaatctctcatctgaa
aaaacaggccttgatgacagattggacttggatagcttctcttctccctctagactgggc
catccaccacctcctggagctggtggtgtctaccaggcctttcttaaagggcctagcagc
gagactgctcaggaaggagatgtgcagccttatttctctcagtctgtgggcatctgtctt
gagaagcagaccactacgactcctgctaatgatacgtggggtgatattccgggtgctggg
acccactgtgctagtggaccacagtgtgagaatgttgagaacttagaatttgttcagaat
caagaagttttgccacgtgagaccctgaatgtggatcccttttccctgagtgatcagatc
cgatatggacctcttcctgggccagctgcctccaggcctgttactatgggccttgccaga
ggtggggggctaaatcttgaggcccctgatataccactgcaccctacacgacctgacagt
gtgtcatccagctacagcagccatagccacagaagtcctcctgggtcagccagaccccaa
gaattggtgggcacattcattcaacaagaagttggaaaacttgaagatgatacttcaggg
agtttttttaagcaaattgattcttctcctgttggaggtgaaacagatgaggtgattggg
agccaaaattactgcagcagtctgtcccagccttcaaccccaagccccccaaaacctaca
ggagtattccaaacaagtgcaaacagttcttttgagccagtgagatcccatttggttgga
gtgaaaccagttgaagcagatcgtgccaacatggtagttgaagtgagagggacccggaac
tgccagaagaagcgcagagcagctgttataccacctgatgccatcccaggaaacctggaa
cagccaccagacaacatggagaccctatgtacacctcaggcctgccctttgcctcttagc
acctctggagaggcagggcaactggtttcacacacagcagggccacccttggatgctgtg
cgcccagtgcctgataagaggccctcagccagggcacagaagtgtgagagcccagcaaca
actctgtgggcacaaaatgagctgccagattttggtggcaatgtccttctagcccctgct
gcccctgcactttatgttcctgtaaaaccaaaaccttcagaggttgttcatcatccagaa
aagggaatgtctggacagcagtcatggaaacaagggtctgtgccacctttgcagaaccaa
gaccctcctggtgcctctgagaaccttgagaaccctcctgaggtaggagaagaggaggcc
cttccattgcaggcaagttctggttatgcgagtttgctgtcctcaccacccactgaatct
ttgcacaatcaacctgtcgtgattgcccagcctgatcaaagctataatttggctcagccc
attaatttttctgtgtccttactgaatcctaatgagaagaatcagtcctggggagatgct
gtggtgggggagaaagccatggtgagcaacagccgggctctcagtggtgattcggaagaa
catgctgctttgtctggaattccaaccagtgctgtcactggctcatctttgcctagcagt
atcacccagagttgtgcccctcgaagttctgggtcttctgaaatgattgctagccagcct
gccagttggttggttcaacagctaccccctcaaattcctcaaagtcagcatcctaatgca
gaaaaggttccttctgagtttgttaatagccctgctggaaatacaagtgtgatgttagtt
ccacctgcaaacagtactttggtacctaatagtaataaggcagatcactctagtaaccag
gaagaagctgttggcgccctagacttcacattaaatagaactttggaaaatcctgtgaga
atgtatagcccatctcattcagatggcccagcttctcagcagcctcttgtcaaccatccc
aaacaatctgggcctgggctgcataatcaggatcatttctaccagcaggtaacaaaagat
gctcaggaccagtataaactagaaagagcccagccagagctggtgcctccccggccacag
aattctccccaacaagtgcccgaagcagcatgtccagagccttcaaatccagatagccca
cccacacagggacagtctgaaagcttggcccagccaccagcaagtccagctccaatcaac
acaggccagctgctgcctcagccaccgcagtcttccagtgcatcagttacatctacaaat
tccagccaggcagctgtgcggtcagagcagccgtggctacacccaccgcttcccaatact
tttggcccagcacctcaagatttggcatcctactactattatagacccctgtatgatgcc
taccagtctcagtatccttcaccgtacccgtcagaccctgggacagcctccctatactac
cagggtatgtatggcctgtatgagcctcgttacagaccctatgacagctcagcatctgct
tatgccgagaaccaccgctattctgagcctgagcggcccagctcccgtgcaagtcactat
tccgaccagctcactcccaggcaaggatatcctgaaggatactataattccaagagtgga
tggagcagtcacagtgattactatgcaaattattactctggccagtatgattatggagac
cctagccgctgggatcgttactatgggtctcgctttagggaccctcacacctgggaccgg
aggtactggtatgactcggaacatgacccatacaggaaggaccactatgcttacagtgac
aggcctgagaaatgtgatgatcactggaggtatgaccctcgcttcactgggagcttcgat
gatgacactgagctccacagggacccctatggagaagaaatagacagacgcagcatccac
agcgagcactcagcacggagcttgcgcagtactcacagcctgcccagccgccacagcagc
ctcagctcccattcacaccagagtcagatttacagaagccacaatgtgactggtggttcc
tttgaggcccctcatgctccaggctcatttcatggtgattatgcctatggcacatatgcc
agcaatttcagcggtgcccatggttttccagagtacagctaccctgcagacacctcctgg
cctactgtggagcaagttccatcaagaccgacatctcctgagaagtttacggtgcctcat
gtctgtgccaggtttggtcctggtggtcagctccttaaagtggttcccaacctgccttca
gaaggacagcctgcgctggtggagatccacagcttagagaccttgctgcagcacacacct
gagcaggaagagatgcgctccttcccaggacctcttggcaaggatgatacccacaaagta
gatgttattaactttgcacagaataaagcaacaaaatgtttgcagaatgaaagtttaatt
gacaaagagtctgcaagtcttctttggaacttcattattctgttatgcagacagaatggg
accgttgtgggaacagacattgcagagcttttgttacgggaccatagaactgtatggctt
cctgggaagtcacccaatgaggcaaacctgatagattttaccaacgaggctgtggaacaa
gtggaagaggaggagtcaggggaggcgcagctctcatttctcacagatagtcagacagtg
accaccagcgtgctggagaaggagactgagcggttccgtgagctcttgctgtacggccgg
aagaaggatgctctggagtctgccatgaaaaatggcttatggggtcatgctctgctgctt
gcaagtaagatggacagtcggacacacgcccgtgtcatgaccaggtttgccaacagtctt
ccaatcaatgaccccctgcagactgtctaccagctcatgtctggacggatgcctgctgca
tccacgtgttgtggagatgagaaatggggagattggaggccacatcttgcaatggttttg
tccaacctgaacaacaacatggatgttgaatctaggaccatggctacaatgggcgatact
ctagcatcaaaaggcctgctggatgctgcacatttctgctacctgatggcccaggttgga
tttggggtttatacaaagaaaactacaaaacttgtcttgataggctcaaatcatagtttg
ccatttttaaagtttgccaccaatgaagccattcaaaggacggaggcttatgagtatgct
cagtcccttggagcgcatacctgtcccttacctaacttccaggtgtttaaattcatctac
ttgtgccgcctggctgaaatgggacttgcaacacaggccttccactactgcgaagtaata
gccaagagtgttctgacacagcctggtgcatactctcctgttctgattagccagttgact
cagatggcttcccagttacgcctcttcgatcctcaactgaaagagaagccagaggaggag
tcctttgtggaacctgcctggttggtgcagctgcagcacgtggagaggcagatccaggag
ggcactgtgctgtggagccaagatggaactgaaccccagcagtgtcacattacatcgggc
tctgaggtggagcagtcagatggccctggactcaaccaccagacagggccaagggccgac
aaccctctactgatgccaagcactgagcctttgatgcatggtgtgcaactgctgcctaca
gctcctcagacattgcccgatggccagcctgctcaccttgccagggtgccaatgttccca
gtgccaatgtctcatggccctctggagctgagtcctgcctatggacccccaggatctgta
cttggcttcccagaatcctccagatctgatcctacagtgctgcatcctgggcaggccttg
ccacccactacaccaggtctccaggaaagtgggcctcctctccaggaggccagcagtcct
gacccagaagtggtgccccggggctcacctgtcagacactcccctccagagctcagtgaa
gaggaacttggcgagaacttggctgatctgggctcctccagaacagcacaggacttggaa
agctccccagtgtggggtcttggcagctccaatctgacacatgcgccatctttgacacct
gattctgaaggaaagaaacctgcacaagctgtcaaaaaggagcccaaggaacccaagaag
acagagtcctggttctctcgttggctgcctgggaagaaaagaacagaagcttatctacca
gatgacaagaacaaatcaattgtttgggatgaaaagaagaaccagtgggtgaatttgaat
gaaccagaggaggagaagaaggctccacccccacctccaacatcgttccccagggttccc
caggtgactcccactgggcctacaggaccacccacggcctccgtgaatgtgttttctaga
aaagcaggtgggtccagagctcgctatgtggatgttctaaacccaagtggaacacagcgg
agtgaaccagctcttgctcctgcagatttctttgctcctcttgctccgctgccaatccct
tctaacttatttgtaccaaacccagatgcagaagagccacaacctgcagatgggactggc
tacaggggacaggcaccagctgggactcagtctaaggcagagcccaccctggaacccaag
gtagtaagctctacagtatcagcccctggacctgaactcttaccttccagaccagatggc
tcccagggaggagagctctcgcgctgtagctctttgagctcgctctcacaggaagtgagc
cggcatttccatcagggtcccggagaccactgtcctgtaggggcccctcctggtgggtct
gtgcccttttacaaccctgctcagttggtgcaggcttctgtcacctcggggaattcaagg
ccagggaggattggccaaagaaaatatgcggcattgaactag
DBGET
integrated database retrieval system
