Mastomys coucha (southern multimammate mouse): 116089847
Help
Entry
116089847 CDS
T07224
Symbol
Snapc4
Name
(RefSeq) snRNA-activating protein complex subunit 4 isoform X1
KO
K09453
snRNA-activating protein complex subunit 4
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcoc03000
]
116089847 (Snapc4)
03021 Transcription machinery [BR:
mcoc03021
]
116089847 (Snapc4)
Transcription factors [BR:
mcoc03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
116089847 (Snapc4)
Transcription machinery [BR:
mcoc03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
116089847 (Snapc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
116089847
NCBI-ProteinID:
XP_031225280
LinkDB
All DBs
Position
Unknown
AA seq
1348 aa
AA seq
DB search
MDIDAEREKITQEIQELERILYPGSSSVHLEVSESSLSSDSEADSLPDEDLETAGAPILE
EERSSEGSNEEEDPKDKALPEDPETCLQLNMVYQEVIREKLAEVSQLLAQNQEQQEEILF
DLSGTKCPKVKDGKSLPSYMYIGHFLKPYFKDKVTGVGPPANEETREKATQGIKAFEQLL
VTKWKHWEKALLRKSVVSDRLQRLLQPKLLKLEYLHEKQSRVSSELERQALEKQIKEAEK
EIQDINQLPEEVLLGNRLDSHDWEKISNINFEGARSAEEIQKFWQSSEHPSINKQEWSTE
EVERLKAIAATHGHLEWHLVAEELGTSRSAFQCLQKFQQCNKALKRKEWTEEEDHMLTQL
VQEMRVGNHIPYRRIVYFMEGRDSMQLIYRWTKSLDPSLKRGFWAPEEDAKLLQAVAKYG
AQDWFKIREEVPGRSDAQCRDRYIRRLHFSLKKGRWNAKEEQQLMQLIEKHGVGHWARIA
SELPHRSGSQCLSKWKILARKKQRLQRRRGQRPHHSSQWSSSSGSSSGGSEDYGSSSSSS
SSEDSDVELEESLENSRTLAPQQYRVPDIDLWVPTRLLTSQSQREGTGCYPEHPAVSCCT
QDATQNHHNEGSTTVSAPEKNQMQAPYETHSTVPRGVQFLHFSDTHLASMKDPTCKHVLK
VPLEKMLKLIRTRPTTQSHTLMKERRRQPPLPNSCPGSDPGNRMVGPHLRRLWHGTFQNK
QRRKRQALHRRLLKHRLLLAVIPWVGDINLACTQAARKPATVQTQADSIRMQLECARLAS
TPVFTLFIQLLQIDTAGCMEVVRERKSQPPALLQPGTQNTQPHLLQASSNGKNSTGCRLP
SMPGEQTAKRASHKGRPWLGSCRAEATPFQVPVAAPRGLRPKPKTVSELLREKRLRESHA
KKASQALGLSSQLLVSSPVILHPPLLPAPHGSTVVGPATSSVELSVPVAPVMVSSSPSGS
WQVGGISATDKQLPNLQTISLNPSHKGTQIAAPATFRSLALAPGQVPTGCPLSTLGQTST
TSQKQSLPKVLPILPAAPSLTQLSVQPLASGQPLTTKSSLPVNWVLTTQKLLSVQVPAVV
GLPQSVMTPETIGLQAKQLPSPAKIPAFLEQPPASTDTEPKGPQGQEIPPEKKEIPGPEK
KALDLSLLSQESEAATTTWLKGCQGVCVPPLGSRMPYHPPSLCSLRALSSLLLHKQDLEQ
KASSLVASQAAGAQPEPKARALQASLELVQRQFQDNPAYLLLKTRFLAVFSLPAFLATLP
PNNVPTTLSPAAAVVSESDSEDPGDLELKDRARQLDCMACRVQASPAAPDPGQRAPSPGE
VSAPSHLDASDLDDLDVLRTRHARHSRK
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atggacatagacgccgaacgagagaaaataactcaggagatccaggagctcgaaaggatt
ttatatcctggatcctccagtgtccaccttgaggtctctgaatccagtctcagttcggac
tccgaagcagattccctgcctgatgaggacttggaaaccgctggtgcccccatcttggaa
gaagaaaggtcgagtgagggcagcaatgaggaggaggaccccaaggacaaagctctacct
gaagacccagagacctgtctgcagctaaatatggtctaccaggaggtgatccgggaaaag
ctggcagaggttagccagttgctagcccagaaccaggagcagcaggaggagatcctgttt
gatctgtctgggaccaaatgccctaaggtgaaggatggcaaaagcctgccttcatacatg
tacataggccacttcctgaagccatacttcaaggacaaggtgactggagtggggcctcct
gccaacgaagaaacacgggagaaggctacccagggaatcaaggcctttgaacagctcttg
gtgaccaagtggaagcactgggagaaagccttgctcaggaagtctgtagtgagtgaccgc
ctgcaacgccttctccagcccaagttgctgaagcttgaatacttacacgaaaaacagagc
cgagtctctagtgagttggaaaggcaggccttggagaagcagattaaggaagcagagaaa
gagattcaggacatcaaccagctcccagaggaagtgttgttggggaaccggctggacagc
cacgactgggagaagatttccaatattaactttgaaggagcccgcagtgcggaggagatc
cagaagttctggcagagttctgagcatccaagcatcaataagcaagaatggagcacagaa
gaagtggagaggctaaaagccatcgctgccacacatggccacctggagtggcatttggtt
gcagaggaactcgggacaagccgcagcgccttccagtgcctgcagaaattccagcagtgc
aacaaagccctgaaacgcaaggagtggacagaggaggaagaccacatgctcacccaactg
gtccaagagatgcgcgttgggaaccatattccataccgcaggattgtctacttcatggaa
gggagagactccatgcaactgatctaccgttggaccaagagcttagatcccagcctgaaa
aggggattctgggccccagaggaagatgctaaattgcttcaagctgttgccaagtatggg
gcgcaggactggtttaaaatccgggaagaggtgccaggtaggagcgatgcccagtgcaga
gaccgctacatcagaagattacatttcagcttgaagaagggtcggtggaatgcaaaggaa
gaacaacaactaatgcagttaatagaaaaacacggtgttggtcactgggcaagaatagct
tctgaactgccacatcggtcaggctcacagtgtctgagcaagtggaaaatcttggccagg
aagaaacagcgtctccagaggaggagagggcagaggccccatcacagtagccagtggagc
tccagcagtggcagcagcagtggcggcagtgaggactatggcagcagcagcagcagcagt
agcagtgaagactcagatgtggagctggaggagtctctggagaacagtagaacattggct
cctcaacagtacagagtgccagacattgacctgtgggttcctaccaggctgctcaccagc
cagtcgcaaagagaagggacggggtgctacccagaacaccctgctgtctcctgctgcact
caggatgccactcaaaatcaccacaacgaaggttctactacagtctctgctcctgagaaa
aaccagatgcaggcgccctatgagacccacagcactgttccaagaggagtccagttccta
cacttctcggacactcacctagcaagtatgaaggatccgacctgcaagcatgtgttgaaa
gtgcccctagagaaaatgctgaagttaatcaggactcgtccaaccacccagagccacaca
ctgatgaaggaaagacggaggcagccacccctgcctaattcatgcccaggatctgaccct
ggtaacagaatggttgggccccatctgcggcggctgtggcatggaactttccagaataag
cagagacgcaagagacaggctctccatcgcaggcttcttaagcacaggcttctgctggct
gtgataccctgggtgggtgacatcaacttggcctgcacacaagctgcccggaaacctgca
actgtacagactcaagctgacagcatcaggatgcagttagaatgtgcccgcctggccagc
actccagtgttcacactgtttattcagctattgcagattgatactgcgggctgcatggag
gtggttcgagagaggaaaagccagccacctgcactgctccagcctggcacccagaacacc
cagccacatctcctgcaggcatcctctaatggcaagaacagcacaggctgccgtcttcca
agcatgccgggtgagcaaactgcaaagagagccagccacaaagggcgtccatggctgggg
tcctgcagggctgaggctacccccttccaagttcctgtagcagccccacgcggcctccgg
ccaaagcctaagactgtatctgagctgcttcgggagaagcggctccgtgagtcccatgct
aagaaggcctctcaggctcttggcctcagcagccagctgctggtctcctcacctgtgatc
ctccatccccctctgctgccagccccccatggctccacagtagtaggccctgcaacttcc
agtgtagaactctccgtacctgtggcaccagtgatggtcagttcaagtccttctggctcc
tggcaggtgggtgggatctcagccacagacaagcagctccccaacctacaaaccatttcc
ctaaatccttcccacaaagggacccagattgcagcccctgctacttttaggagcctagcc
ttagcccctgggcaggtccccacaggctgccccctgagtactctaggacagacctctacc
acatcccagaagcagagcctgcccaaggtcctgcccatcctcccagcagcccccagcctc
actcagctgtctgtgcaaccactggcaagtgggcagcccctgacaaccaagtccagcctg
cctgtaaactgggttctcacaactcagaagctgctctctgtccaagtgccagctgtggtg
ggcctcccacagtcagtgatgacccctgagaccataggactacaagcaaaacagctacct
tcccctgccaagattcctgcttttctggaacagcctccagccagtacagacacagaaccc
aaaggacctcagggccaggaaataccacctgaaaagaaagaaatacctgggcctgaaaag
aaggctttggacctgagtctcctttcccaggaaagtgaggcggccaccaccacatggctg
aaggggtgccaaggtgtttgtgtgcccccgctggggagcaggatgccctatcatccccct
tctctgtgcagcttgcgagcattgtccagcctcctcctccataaacaggacttagagcag
aaggcttcctctctggtggccagccaggcagctggagcccaacctgagcccaaggctaga
gccctacaagcctccctggagctggtacagaggcagttccaggacaacccagcctacctc
ctgctaaagactcgtttcctggctgtcttctcccttcctgcattcctggccactctgccc
cccaacaatgttcccacaaccctgtcaccagccgcggctgtggtttctgagagtgacagt
gaagaccctggtgacctggagctcaaggacagggccagacagctggactgcatggcctgc
agagtgcaagcaagcccagcagccccagaccctggacagagagctccaagtcctggtgag
gtttctgctccctcccatctggatgcttctgaccttgatgaccttgacgtgctcaggacc
cgacatgctcggcattcccggaaatag
DBGET
integrated database retrieval system
