Mastomys coucha (southern multimammate mouse): 116089919
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Entry
116089919 CDS
T07224
Symbol
Rapgef1
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04015
Rap1 signaling pathway
mcoc04510
Focal adhesion
mcoc04722
Neurotrophin signaling pathway
mcoc04910
Insulin signaling pathway
mcoc05211
Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
116089919 (Rapgef1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116089919 (Rapgef1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
116089919 (Rapgef1)
09156 Nervous system
04722 Neurotrophin signaling pathway
116089919 (Rapgef1)
09160 Human Diseases
09162 Cancer: specific types
05211 Renal cell carcinoma
116089919 (Rapgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
116089919
NCBI-ProteinID:
XP_031225444
LinkDB
All DBs
Position
Unknown
AA seq
1227 aa
AA seq
DB search
MAGPWNPSEARPRPHAEGQTRSRDSQRSHLSSFTMKLMDKFHSPKIKRTPSKKGKPAEVS
KIPEKPVSKEARDRFLPEGYPIPLDLEQQAVEFMSTSAVASRSQRQKNLCWLEEKEKEVV
SALRYFKTIVDKMAIDKKVLEMLPGSASKVLEAILPLVQTDPRIQHSSALSSCYSRVYQS
LANLIRWSDQVMLEGVNSEDKEMVTTVKGVIKAVLDGVKELVRLTIEKQGRPSPTSPVKP
SSPSSKPDGQPELPLTDREMEILSKTTSVSPSAELLPDSTGEEVAPPKPPLPGIRVVDNS
PPALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPVGINRQDFDVECYTQRRLSGGSRSCG
GESPRLSPCSSTGKLSRSDEQLSSLDRDSGQCSRNTSCETLDHYDPDYEFLQQDLSNADQ
TLPQAACSLSPLPESLGESGPPFLGHHFQLPLGSCPQQEGQQTDTPPALPEKKRRSAVSQ
TTDSSGCRVSYERHPSQYDNISEGDLQNPVPVQPVPYPSFAAILPFQQGASSAPAEFVGD
FSVPESVGDPEKPPPLPEKKNKHMLAYMQLLEDYSEPQPSMFYQTPQSEHIYQQKNKMLM
EVYGFSDSFCGSDSTQELAPPPALPPKQRQLQASYAASSFSVSYCVQQTKVAFTPEDGSA
AQGLSVSVSNSFLNRHGSLPVPSYKSVFRSYSQDFMPHHQASVQPFLPPTSSSSPHFPPV
HASQSSDLAVPTVSSPPPSTVDGPLSSSQDSSFHGNPVCLPSETSFTDSEPPSGKDGHPR
DSSVSSASEKDSRENGERSPKSLDGLESAQSEEEVDELSLIDHNEIMARLTLKQEGDDGP
DVRGGSGDILLVHATETDRKDLVLYCEAFLTTYRTFISPEELIKKLQYRYEKFSPFADTF
KKRVSKNTFFVLVRVVDELCLVELTEEILKLLMELVFRLVCSGELSLARVLRKNILDKVD
QKKLLRCAHSDQPLAARGVAARPGTLHDFHSHEIAEQLTLLDAELFYKIEIPEVLLWAKE
QNEEKSPNLTQFTEHFNNMSYWVRSIIMLQEKAQDRERLLLKFIKIMKHLRKLNNFNSYL
AILSALDSAPIRRLEWQRQTSEGLAEYCTLIDSSSSFRAYRAALSEVEPPCIPYLGLILQ
DLTFVHLGNPDYIDGKVNFSKRWQQFNILDSMRCFQQAHYEIRRNDDIINFFNDFSDHLA
EEALWELSLKIKPRNITRRKTDREEKT
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atggctggaccctggaacccttcggaggcccggccccgaccgcatgcagaagggcagacg
cgctccagagactctcagcgttctcatctctcctccttcaccatgaagctgatggacaaa
ttccactctcccaaaatcaagagaacaccatccaagaagggaaaaccagccgaagtgtcg
aagattcctgagaagcctgtgagcaaagaggcaagagacagatttctaccagagggctac
cctatccccttggatctggagcagcaggcagtagaatttatgtccaccagtgctgtggct
tccaggtctcagaggcagaagaacctgtgttggctggaggagaaggagaaggaggtggtc
agtgccttgcgctactttaagaccattgtggacaaaatggccattgataagaaggtcctg
gagatgctcccggggtcagccagcaaggtgctggaggccatcttacccctagtgcagact
gaccctcggatccagcacagctcagccctttcctcctgctatagccgagtataccagagc
cttgccaaccttatccgatggtctgaccaggtgatgctagagggcgtgaactcagaagat
aaggagatggtgacaactgtgaagggcgtcatcaaagctgtgctggatggagtaaaggag
ctagtgaggctaaccattgagaagcagggccgaccatcaccaacaagcccagtgaaaccc
agttccccatccagcaagcctgatggccagcctgagctccctctaacagaccgagaaatg
gagattctgagcaagacaacaagtgtgtcgccatctgctgaactgctcccagactccacc
ggtgaagaggtcgcaccccccaagccccctttacctggcatccgggtggttgataacagt
ccaccagcattaccacccaagaaaaggcagtctgctccatcccctacccgggtggctgtg
gttgcccccatgagtcgggctaccagtggctccagtttgcctgttggaatcaataggcag
gactttgatgttgaatgttacacccagaggcgcctgtcaggaggcagccgctcctgcggt
ggtgagtctcctcgcttatccccctgcagcagcacgggcaagctcagccggtcagatgaa
cagctgtcctccctagacagggatagcgggcagtgctcacggaacacaagctgtgaaaca
ctagatcactatgaccccgactatgaattcctccagcaagacctctccaatgcagaccag
acccttccacaggcagcctgtagcctcagcccactgccggagtccctgggggaatctggg
cctccatttcttggccaccatttccagctgcctctgggaagctgtccccagcaggaggga
cagcagacagacactccacctgcccttcctgagaagaagcgtaggagtgcagtctcccag
accacggacagctctggctgcagggtgtcctatgagcgacacccctcacagtatgacaac
atctcagagggtgacctgcagaacccagtccctgtccagcctgtgccctacccgtcattt
gctgctatcctgccctttcagcagggagcttcctccgcccctgctgagtttgtgggtgat
ttcagtgttcctgagtcagtgggtgacccagagaagccacctcctctaccagagaagaaa
aacaaacacatgctggcctacatgcaactgctggaggactattcagagccacagccctcc
atgttctaccagacaccgcagagtgagcacatctaccagcagaagaacaagatgctcatg
gaagtctacggcttcagcgactccttctgcggtagtgactccacgcaggagctggcccct
ccacccgctctgcctcccaagcagcggcagctgcaggcctcctatgctgcttcttccttc
tctgtctcctactgtgtccagcaaactaaagtggccttcacccccgaggacggcagtgcc
gctcagggcctcagtgtatccgtgtctaactcctttctcaaccggcacggcagcttgcct
gtgccctcgtacaaatctgtgtttaggtcttactcccaggacttcatgcctcaccaccaa
gcctccgtccaacctttccttccgcctacctcctcttcctctccacatttcccacctgtc
cacgcgtcccagagctcggacttagcggtgcccaccgtaagcagtccgcctcccagcacc
gtggacgggcctctctcgtcttctcaggacagcagctttcatgggaaccctgtctgcctt
ccttccgaaacctctttcactgactcggaaccaccatctgggaaggatggacatcccaga
gattcttcggtcagcagtgcatctgagaaggacagcagagaaaatggggagaggtccccg
aagtcactggatggtctggagtcagcccagtcagaagaggaagtggatgaactgtccctt
attgaccacaatgaaattatggccaggttgacactcaagcaagagggtgatgatgggcca
gatgttcgtggaggttcaggagacattttactggtccatgctactgagacagacagaaaa
gacctggtgctgtactgtgaagccttcctgaccacctacaggaccttcatcagcccagag
gagctcatcaagaagctgcagtaccgatatgagaaattctctccctttgctgacacattc
aagaagcgagtgagcaagaacacattctttgtgctggtgcgagtggtggatgagctctgc
cttgtggagctgacagaggagatcctgaagctgctgatggagctagtcttccgcctggtg
tgcagtggggagctcagcctggccagagtactccggaagaacattctagacaaggtggac
cagaagaagctgctcaggtgtgcccattccgaccagcctctggcagccaggggtgttgca
gccagaccaggaaccttgcatgatttccacagccacgagatagccgagcagctgacactg
ctggatgccgagcttttctataaaatagagattcctgaagttttgctttgggccaaagag
cagaatgaggagaagagccccaatctgactcagttcacagagcacttcaacaacatgtcc
tactgggtgcggtccatcatcatgctgcaggagaaggcccaggaccgggagaggctgctc
ctgaagttcatcaagatcatgaagcacctgcgcaagctcaacaatttcaactcgtacctg
gccatcctctcagcactagactcagcccccatccgcagactggagtggcagcggcagacc
tcagagggcctggctgagtactgcacattgattgacagctcatcctccttccgagcctac
cgggctgccctttcagaggtggaacccccatgtatcccatacctaggtctgatcctgcaa
gacctgaccttcgttcatctgggaaacccagattatattgacgggaaagtaaacttctcc
aagcggtggcaacagttcaacattttggacagcatgcggtgcttccagcaggcgcactat
gaaatccggagaaacgatgacatcataaacttcttcaatgacttcagtgaccacctagcc
gaggaagccctgtgggaactctctctgaagatcaagcctaggaacataacaaggcgaaag
acagaccgcgaagagaaaacctag
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integrated database retrieval system
