Mastomys coucha (southern multimammate mouse): 116089929
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Entry
116089929 CDS
T07224
Symbol
Sptan1
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1 isoform X1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04210
Apoptosis
mcoc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
116089929 (Sptan1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
116089929 (Sptan1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mcoc04812
]
116089929 (Sptan1)
Cytoskeleton proteins [BR:
mcoc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
116089929 (Sptan1)
Intermediate filaments
Intermediate filament-binding proteins
116089929 (Sptan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
EF-hand_1
EF-hand_7
EF-hand_6
SH3_9
EF-hand_8
SH3_2
EF-hand_5
SH3_3
SH3_10
SCO1-SenC
Tetrabrachion
Motif
Other DBs
NCBI-GeneID:
116089929
NCBI-ProteinID:
XP_031225488
LinkDB
All DBs
Position
Unknown
AA seq
2477 aa
AA seq
DB search
MDPSGVKVLETAEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWI
QEKLQVASDENYKDPTNLQGKLQKHQAFEAEVQANSGAIVKLDETGNSMISEGHFASETI
RTRLMELHRQWELLLEKMREKGIKLLQAQKLVQYLRECEDVMDWINDKEAIVTSEELGQD
LEHVEVLQKKFEEFQTDLAAHEERVNEVNQFAAKLIQEQHPEEELIKTKQDEVNAAWQRL
KGLALQRQGKLFGAAEVQRFNRDVDETIGWIKEKEQLMASDDFGRDLASVQALLRKHEGL
ERDLAALEDKVKALCAEADRLQQSHPLSANQIQVKREELITNWEQIRTLAAERHARLDDS
YRLQRFLADFRDLTSWVTEMKALINADELANDVAGAEALLDRHQEHKGEIDAHEDSFKSA
DESGQALLAAGHYASDEVREKLSILSEERTALLELWELRRQQYEQCMDLQLFYRDTEQVD
NWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDEFATKLIQNNHYA
MEDVATRRDALLSRRNALHERAMHRRAQLADSFHLQQFFRDSDELKSWVNEKMKTATDEA
YKDPSNLQGKVQKHQAFEAELSANQSRIDALEKAGQKLIDVNHYAKEEVAARMNEVISLW
KKLLEATELKGIKLREANQQQQFNRNVEDIELWLYEVEGHLASDDYGKDLTNVQNLQKKH
ALLEADVAAHQDRIDGITIQARQFQDAGHFDAENIKKKQEALVARYEALKEPMVARKQKL
ADSLRLQQLFRDVEDEETWIREKEPIAASTNRGKDLIGVQNLLKKHQALQAEIAGHEPRI
KAVTQKGNAMVEEGHFAAEDVKAKLSELNQKWEALKAKASQRRQDLEDSLQAQQYFADAN
EAESWMREKEPIVGSTDYGKDEDSAEALLKKHEALMSDLSAYGSSIQALREQAQSCRQQV
APMDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAY
VKKLDPAQSASRENLLEEQGSIALRQGQIDNQTRITKEAGSVSLRMKQVEELYQSLLELG
EKRKGMLEKSCKKFMLFREANELQQWINEKEAALTSEEVGADLEQVEVLQKKFDDFQKDL
KANESRLKDINKVAEDLESEGLMAEEVQAVQQQEVYGAMPRDEADSKTASPWKSARLMVH
TVATFNSIKELNERWRSLQQLAEERSQLLGSAHEVQRFHRDADETKEWIEEKNQALNTDN
YGHDLASVQALQRKHEGFERDLAALGDKVNSLGETAQRLIQSHPESAEDLKEKCTELNQA
WTSLGKRADQRKAKLGDSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLER
HQEHRTEIDARAGTFQAFEQFGQQLLAHGHYASPEIKEKLDILDQERTDLEKAWVQRRMM
LDHCLELQLFHRDCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEK
IAALQAFADQLIAVDHYAKGDIANRRNEVLDRWRRLKAQMIEKRSKLGESQTLQQFSRDV
DEIEAWISEKLQTASDESYKDPTNIQLSKLLSKHQKHQAFEAELHANADRIRGVIDMGNS
LIERGACAGSEDAVKARLAALADQWQFLVQKSAEKSQKLKEANKQQNFNTGIKDFDFWLS
EVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDTSQV
KEKRDTINGRFQKIKSMATSRRAKLSESHRLHQFFRDMDDEESWIKEKKLLVSSEDYGRD
LTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGQEEIQQRLAQFVEHWKEL
KQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDYGDTLAAIQGLLKKHEAF
ETDFTVHKDRVNDVCTNGQDLIKKNNHHEENISSKMKGLNGKVSDLEKAAAQRKAKLDEN
SAFLQFNWKADVVESWIGEKENSLKTDDYGRDLSSVQTLLTKQETFDAGLQAFQQEGIAN
ITALKDQLLAAKHIQSKAIEARHASLMKRWTQLLANSATRKKKLLEAQSHFRKVEDLFLT
FAKKASAFNSWFENAEEDLTDPVRCNSLEEIKALREAHDAFRSSLSSAQADFNQLAELDR
QIKSFRVASNPYTWFTMEALEETWRNLQKIIKERELELQKEQRRQEENDKLRQEFAQHAN
AFHQWIQETRTYLLDGSCMVEESGTLESQLEATKRKHQEIRAMRSQLKKIEDLGAAMEEA
LILDNKYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQARNTTGVTEEALKEFSMMFKHF
DKDKSGRLNHQEFKSCLRSLGYDLPMVEEGEPDPEFEAILDTVDPNRDGHVSLQEYMAFM
ISRETENVKSSEEIESAFRALSSEGKPYVTKEELYQNLTREQADYCVSHMKPYVDGKGRE
LPTAFDYVEFTRSLFVN
NT seq
7434 nt
NT seq
+upstream
nt +downstream
nt
atggatccaagtggggtcaaagtgctggaaacagccgaggacatccaggagagacggcag
caggtcctggatcggtatcaccgcttcaaggagctttctaccttgcggcggcagaaactg
gaggattcctataggttccagttttttcaaagagatgctgaagagttggagaagtggatt
caggagaagcttcaggttgcatctgatgagaactacaaagacccaaccaacttgcaggga
aagctccagaagcaccaagcctttgaagctgaagtacaggccaactcaggagccattgta
aagctggatgagacaggaaactcgatgatttctgaagggcacttcgcatctgaaaccatc
aggacacgtttaatggagctgcaccgccagtgggagttgcttttggagaagatgcgggag
aaaggaatcaaactgctgcaggcacagaagctggtgcagtatttgcgggagtgtgaggat
gtaatggactggatcaatgacaaggaagccattgtgacttctgaggagctgggccaggac
ctggagcatgtagaggtactacagaagaagtttgaagagtttcagactgatctggctgct
catgaagaaagagttaatgaagtaaaccagtttgctgccaaactcatccaggagcagcac
ccggaagaggagttgatcaagaccaagcaggatgaagtaaatgcggcttggcagcgactg
aaaggcctggctcttcaaaggcaggggaagctgtttggtgctgctgaggtccagcgcttt
aacagggatgtagatgagaccattggttggattaaggagaaagagcagttaatggcctct
gatgactttggcagagacttagcaagtgttcaagctctgcttcgaaagcacgagggtctg
gagagagatcttgctgctctagaggacaaggtgaaagccctgtgtgccgaggctgaccgc
ctgcaacagtcacaccctctgagtgccaaccagatccaggtgaagcgagaggagcttatt
accaactgggaacagatccgaactctggcagcagagagacatgctcggcttgatgactca
tacaggcttcagcgctttcttgctgacttccgtgacctcacaagctgggtgactgaaatg
aaagccctcatcaatgcagatgaactggccaatgatgtggctggtgctgaagccctgcta
gacaggcatcaagagcacaagggagaaatcgatgctcatgaagatagctttaagtctgca
gatgagtctgggcaggctctgctcgcggctggtcactatgcctcagatgaagtgagggag
aagctgagcatcctctctgaggagagaactgccctgctggagctgtgggagcttcggagg
cagcagtatgaacagtgcatggacttgcagctcttctaccgtgacactgagcaggtggac
aactggatgagcaagcaggaggcgttcctgctaaatgaagatttgggtgactccttagac
agtgtggaagctcttctgaagaagcatgaggactttgagaaatctctcagtgcccaggaa
gagaaaatcacagcccttgatgaatttgcaaccaaactcatccaaaataaccattatgca
atggaagatgtagcgactcgacgagatgctctcctgagccgccgtaatgcccttcatgag
cgagccatgcatcgccgggcacagctggctgattccttccatctgcagcagttcttccgt
gattctgatgagctcaaaagttgggtcaacgagaagatgaaaactgccaccgatgaagct
tataaagatccatccaacctgcaagggaaagtccaaaagcatcaggcttttgaggctgag
ctttcagcaaaccagagccgtattgatgccttagagaaagctgggcagaagctaatagat
gtcaaccactatgccaaggaagaagtagcagctcgtatgaatgaggtcatcagtttgtgg
aaaaaacttctagaggccacagaactgaaagggataaagctccgtgaagctaaccagcag
caacaatttaatcgaaatgttgaagacattgaattgtggctatatgaagttgaaggtcac
ttggcttcagacgattatggtaaagacctcactaatgtccagaacctccagaagaagcat
gctctgctagaggcagatgttgctgctcaccaggatcgaattgatggcatcacaattcag
gcccgccagttccaagatgctggccatttcgatgccgaaaatattaagaagaagcaagag
gcccttgtggctcgctatgaggctctcaaggaacccatggtggcccggaagcagaagctg
gcagattctcttcgtctgcagcagctcttccgagatgtggaggatgaggaaacctggatt
cgagaaaaggagcctattgctgcatccactaacagaggcaaagatcttattggagtccaa
aatctgctaaagaaacaccaagctttacaagcagaaattgctgggcatgaacctcgcatc
aaagcagtgacacaaaagggaaatgccatggtggaagaaggccattttgctgcagaggat
gtgaaggccaaactgagtgagctcaaccagaagtgggaggctctgaaagccaaagcctcc
cagcggaggcaagatctagaggactcgctgcaggcccagcagtactttgccgatgccaat
gaggctgagtcctggatgcgcgaaaaggagcctattgtgggaagtaccgactatgggaag
gatgaagactctgctgaggctctgctcaagaagcatgaagctttgatgtcagatctcagc
gcctatggcagcagcatccaggctttgcgagagcaggcccagtcatgccggcaacaagtg
gcccccatggatgatgagactggaaaggagctggtcttagctctctatgactatcaagag
aagagccctcgtgaggtcaccatgaagaaaggggatatcctcaccttgctcaacagtacg
aacaaggattggtggaaagtggaggtgaatgaccgtcagggtttcgtgccagctgcatat
gtgaagaagctggaccccgcccagtcagcctcgagggagaacctcttggaagagcagggc
agcattgctctgcggcaggggcagattgacaaccagacacgcataactaaggaggccggc
agtgtatctctgcgtatgaaacaggtggaagaactatatcagtctctgctggaactgggt
gagaagagaaaaggcatgttggagaagagttgcaagaagttcatgttgttccgggaagca
aacgagctacagcagtggatcaatgagaaggaggctgctctaacgagtgaggaggttggc
gctgacttggagcaagttgaagtgctgcagaagaagtttgatgacttccagaaggatctg
aaagccaatgagtctcggctgaaggacattaacaaagtagctgaagacctggagtctgaa
ggtctgatggcagaggaagtgcaggctgtgcaacagcaggaggtttatggtgcgatgccc
agggatgaagcagactccaagacagcctccccatggaagtctgctcgattgatggtccac
acagtagctaccttcaactccattaaggagctgaatgaacgttggcgttccctgcaacag
ctggctgaggaacgtagccagctcttgggcagtgcacatgaagtacagcggttccacaga
gatgctgatgaaaccaaagaatggattgaagagaaaaatcaggcactgaacacagacaac
tatggccatgatttagctagtgtccaggccctgcaacgcaaacatgaaggctttgagagg
gaccttgcagctcttggtgacaaggtgaattcccttggggaaacagcccaaaggctgatc
cagtcccaccctgaatctgcagaggacttaaaggaaaagtgcacagagttaaaccaagcc
tggaccagcctagggaagcgtgcagaccagcgcaaggccaaattgggtgactcccatgac
ctgcagcgcttccttagtgattttcgggatctcatgtcttggatcaatggaatacgaggg
ttggtatcttcagatgaactagctaaggacgtcactggagctgaggctttgctggagcga
caccaggaacaccggacagaaattgatgccagggctggcactttccaggcatttgagcag
tttgggcagcagctgttggctcatgggcactatgccagcccagagatcaaggagaaactt
gatattcttgaccaggagcgcacagacctggagaaggcctgggtccagcgcagaatgatg
ctggaccattgcctggagttacagctgttccatcgggactgtgagcaagcagaaaactgg
atggctgcccgggaggccttcttaaacacagaagacaaaggagactcactggacagtgtg
gaggcgctgatcaaaaagcatgaagactttgacaaagctatcaatgtccaggaggaaaag
atagctgccctgcaggcctttgccgaccagctcattgctgtggaccactatgccaaggga
gacattgcaaaccgacgcaatgaggtccttgacaggtggcgccgcttaaaagcccagatg
attgagaaaaggtcaaaactcggagaatctcaaacacttcagcagttcagccgggatgtg
gacgagatcgaagcctggatcagtgagaagttacagacagccagcgatgagtcatacaag
gaccccaccaacatccagctttccaagctgctgagcaagcaccagaagcaccaagccttt
gaagcagaactgcacgccaatgctgaccgaatccgtggagttattgacatgggcaactcc
ctcattgagcgcggggcctgtgctggcagtgaggatgctgtcaaggcccgcctagctgcc
cttgcagaccagtggcagtttctggtgcagaaatcagctgagaagagccagaaactaaaa
gaggcaaataagcagcagaacttcaacactggaatcaaagactttgacttctggctctct
gaggtggaggctctcctggcatctgaagattatggcaaagacctggcttctgtaaacaac
ttgctgaaaaagcatcagctgctagaggcagacatctcagcccatgaggatcgtctgaag
gacctgaacagccaggctgacagcctgatgactagcagtgccttcgacacctcccaagtg
aaagagaagcgggacaccatcaatggacgcttccagaagatcaagagcatggcaacctcc
agaagagcgaaactgagcgagtcccaccgcctgcaccagttcttccgagacatggatgac
gaggagtcctggatcaaggagaagaagttgttagtgagctctgaggactatggcagagac
ctcactggtgttcagaatctgaggaagaaacataagcggctggaagccgaactggctgca
catgaaccggccattcagggtgtcctggacactgggaagaagctttctgatgacaacacc
attgggcaggaggagatccagcagcgtctcgcacagtttgtggagcactggaaggaactg
aagcagctggcagctgcacgaggccaacggctagaggagtccttggagtatcagcagttt
gtagccaacgtggaagaggaggaggcttggatcaatgagaaaatgactctggtggccagc
gaagattatggagatactcttgctgccatccagggcttactgaagaaacacgaagctttt
gagacagacttcactgtccacaaggatcgggtgaatgatgtctgtactaatggacaagac
ctcattaagaagaacaatcaccatgaggagaacatctcatcaaagatgaagggtctgaat
gggaaggtgtctgatctggagaaagcagcagctcagaggaaagcaaagctagatgagaac
tcagccttccttcagttcaactggaaggctgatgtggtagagtcctggattggtgaaaag
gagaacagcttgaaaacagatgactatggccgagatctgtcttctgtccaaactctgctc
accaagcaggagacatttgatgctggcctgcaggccttccagcaggagggcattgccaat
atcactgccctcaaagaccagctgctagctgccaagcacattcagtctaaggccatcgag
gcccgacatgcctccctcatgaagagatggacccagctgttggccaactcagctacccgg
aagaagaagttgctggaggcccagagtcatttccgtaaggtagaagacctcttcctgacc
tttgccaagaaggcatcagctttcaacagctggtttgagaatgcagaagaggacctcacg
gacccagtgcgctgcaactctctggaagaaatcaaagcccttcgagaggctcatgatgct
ttccgctcatccctcagttctgcacaggccgacttcaaccagctagctgagctggaccgc
cagatcaagagtttccgggtggcctccaacccctatacctggttcacaatggaggccctg
gaagagacctggagaaacctacagaagatcattaaggaacgagaactggagctgcagaag
gaacagcggcggcaggaggagaatgacaaactgcgccaagaattcgcccagcatgccaat
gccttccaccagtggatccaggaaacaagaacgtatctcctcgacgggtcctgcatggtc
gaagagtcaggaactctggaatctcagcttgaagctaccaaacgcaagcaccaggagatt
cgagccatgagaagtcagctgaagaagattgaggacctgggggctgccatggaggaagcc
ctcatcctggacaacaagtacactgagcacagcactgtgggcctagcccagcagtgggac
cagttagatcagctgggcatgcgcatgcagcacaacctggagcagcagatccaggccagg
aacacaacgggagtgactgaggaggccctcaaggaattcagcatgatgttcaaacacttc
gacaaggacaagtctggccggctgaaccatcaggagttcaaatcctgtcttcgttccctg
ggctacgacctgccaatggttgaggaaggagaacctgatcctgagtttgaggcaatcctg
gacactgtcgatcccaacagggatggccatgtctctctgcaagaatacatggcattcatg
atcagccgcgaaacggagaatgtcaagtccagtgaagagattgagagtgctttccgggcc
ctcagctctgagggcaagccttatgtgaccaaggaggagctctaccagaacctgacccgg
gaacaagctgactattgtgtctcccacatgaagccctacgtggatggcaagggccgcgaa
cttccaactgcctttgactacgtcgagttcacccgctcactctttgtgaactga
DBGET
integrated database retrieval system
