Mastomys coucha (southern multimammate mouse): 116089983
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Entry
116089983 CDS
T07224
Symbol
Nup214
Name
(RefSeq) nuclear pore complex protein Nup214 isoform X1
KO
K14317
nuclear pore complex protein Nup214
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03013
Nucleocytoplasmic transport
mcoc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116089983 (Nup214)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
116089983 (Nup214)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcoc03019
]
116089983 (Nup214)
Messenger RNA biogenesis [BR:
mcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116089983 (Nup214)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup214_FG
WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
116089983
NCBI-ProteinID:
XP_031225628
LinkDB
All DBs
Position
Unknown
AA seq
2080 aa
AA seq
DB search
MGDEMDAMIPEREMKDFQFRALKRVRIFDSPEELPKERSSVLTISNKYGMLFAGGTNGLN
VFPTKNLLIQNKPGDDPNKIVDTIQGLNVPMKFPVHHLALSCDNLTLSACMMSSEYGSII
AFFDVRTFSNQAKPLKRPFTYHKISNDASGMVNDMKWNPTVPSMVAVCLADGSISVLQVT
DVVKVSATLPPSTGVTCVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYESDHP
VRVLDVLWIGTYVFTIVYAGADGTLETCPDVVMALLPKKEEKHPEIFVNFMEPCYSSCTE
RQHHYYLSYVEEWDLVLAASAASTEVSILARQSDQTNWESWLLEDSSRAELPVTDKSDDS
LPMGVAIDYTNEVEVTINEEKTLPPAPVLLLLSTDGVLCPFYMINQNPGVRSLIKTLELI
STEGERQPKSSGSFPSTPPSPQAPQNLDDPATASSSLPPVSAAPAATFPMPSAAGGPSVF
SFGPSSFKSSTSVTGEPPPYPIGSDSSRAAPGSGTSTFSFAPPSKGSLAPTPAVAPVATS
AAPFTFGSSGFKPTMENIPMSSTPNTGVKPSFPPSASSVKVNLNEKFTAVASSTPIHSST
STPSVLPFSSSPKPAASGPLSHPTPLPASPSSIPLKSPVSPSPSAGRSTQTAPSSAPSTG
QKSPRVNPPVPKSGSSQAKVLQPPVTEKQRHQWKDSDPVLAGIGEEIAHFQKELEELKAR
TSKACFQVGTSEEMKMLRTESDDLHTFLFEIRETTESLHGDISTLKTTLLEGFAGVEEAR
EQHGRNHDSGYLHLLYKRPLDPKSEAQLQEIRRLHQYVKFAVQDVNDVLDLEWDRHLEQK
KRQRRLIVPERETLFNTLANNREIINQQRKRLNHLVDSLQQLRLYNQTSPWNLPSALSPQ
SNTHSFDSDLECLLKTTIESHTKPSPRVPGKLSPAKQAQLRNFLAKRKTPPVRSTAPASL
SRSAFLSQRYYEDLDEGSSTSSVAHPLEGEDARPTCKEEEAVVPGPRHAPVVRTPSVQPN
LLPQVMPFAKPHLIHSSSPAVMSSSVSTSATKVIPQGADSTMLATKTVKHGAPGPSHAVT
APQAAAAAALRRHMASQAPGMSTLTESTLKTVPQVVNVQELKSNSSPPSAAMGSSVPHSA
AKTPHAVLTPVANSQAKQGSLVNSFKPPGPTAASCQLSSGDKALGPGTAKTESAVTSTPS
AAGQLNKPFSFASPGTFTFGTITPNPSSSFTAAPGAAPPTKESNQLEAFSFGGGGKPFCE
TIPGNSPTTGAVSAPSTSVTTASLEETAPSSSKPAVPETTVSTASSKLETSPSKLGELLF
PSSLAGETLGSFSGLRVGQAEEPPKAASKAGAQPAKTSGVSFPSPSVLGKPVEPTGTSSV
SPAPAAPVSALNASTSNSSATVFGSVPLPSAGPSGLISFGGTSLASSKASFSFGNQQTSS
TAASATPTTTSVAPSLPASFPTLSFGGLLSSPSASSLSMSSGKSTEEATPPAVPDKSEHS
EVPATAPSLPVQPQSTQPPQASLQTSDPVKKEPVLVQSTDSSLSRPASSANLVASTESTP
VAPGGPDSKTEAVSPTTFAGPGQTAVAAAVLPGASSAASEASGTPSTSSTVSSSTPTSAT
ETAAFGTATSGSSVFTQPPAASSSSAFSQLSSNTATAPSATPVFGQVAASISSTATATPQ
ASSSGFGSPAFGASAPGVFGQTPFGQSPAFGQATSSPASSFSFSQPGFSSVPAFGQSASS
TPASTSANVFGATSSTSSPSSFSFGQASTNTGGTLFGQNNPPAFGQSPSFGQGGSVFGGT
SATTSTAAPSGFSFCQASGFGSSNTGSVFGQAANTGGSVFGQQSSTSSGSVFGSGNASRG
GGFFSGLGGKPSQDAANKNPFSSASAGFGSTATPNTSNLFGNSGAKTFGGFGSSSFGEQK
PAGTFSSGGGSVASQGFGFSTPNKAGSGAAATLHPSVPSPVRMHPPSGPCPSRHQALGPQ
AVDSLGLDRAQEHSPLDRLTLLSRALAAGEAEPMSAFPQVPVSSCVHLSTLPEPTATDFQ
KNFLMKTLSQEETLETKAQQCLTNCLFPDFKFYIKVFVCY
NT seq
6243 nt
NT seq
+upstream
nt +downstream
nt
atgggagacgagatggatgccatgatccctgagcgggagatgaaggactttcagtttaga
gcactgaagagagtgaggatctttgactctcctgaagagctgcccaaggagcgctcgagt
gtgcttaccatatccaataagtatgggatgctcttcgctggcggcaccaatggcttgaat
gtttttcctactaaaaaccttcttatccaaaacaaacctggagatgatcccaataaaatt
gttgacacaatccaaggattgaatgttcctatgaaattcccagtacatcatctggcactg
agctgtgacaaccttacactctctgcatgcatgatgtctagtgaatatggctccattata
gctttttttgatgttcgcacattttcaaatcaggctaaaccactgaaacgtccatttacc
tatcacaagatttcaaatgatgccagcgggatggtgaatgatatgaagtggaaccccact
gtcccttccatggtggcagtttgtctggctgatggcagtatttctgtcttgcaagttaca
gatgtggtgaaagtgtccgccactcttcctccttcaacgggagtcacatgtgtatgctgg
agccccaaaggaaagcagctggcagtaggaaagcagaatggaactgtggtccagtatctt
cctactttgcaggaaaaaaaggtcattccatgccctccattttatgagtcagatcatcct
gtcagagttctagatgtgctgtggatcggtacatatgtcttcaccatagtctacgctggt
gcggatggcaccttggagacctgtccagatgtggtgatggctctactcccgaaaaaagaa
gaaaaacacccagaaatatttgtgaacttcatggaaccctgctacagcagttgcacagag
cgacagcatcattactacctcagctacgtcgaggagtgggatttagtgctggcagcatct
gcagcttcaacagaagttagcatccttgctcgacaaagtgatcagactaattgggaatct
tggctactggaggactctagtcgagctgaactgcctgtgacagacaagagtgatgactcc
ttgcccatgggtgttgccatagattataccaatgaagtagaagtcaccatcaatgaagaa
aagactcttcctcctgctccggttctcctgttactttcaacagatggtgtgctttgtcca
ttttatatgatcaaccaaaatcctggagttaggtccctaatcaagaccttggaactgatc
tcaacagaaggagagcgacagcctaagtcctcaggaagttttcctagtactccaccttcc
cctcaagctccacaaaacctggacgatccagcaacagcctcttcgtctcttccacctgtg
tctgctgctcccgcggctaccttccctatgccctctgctgcgggaggcccttctgtgttc
tcctttggtccttcatccttcaagtcctctacttctgtcaccggggagcccccaccgtat
cccattggttctgacagctccagagcagcgccaggctctggcacctccactttctctttt
gctcctccttccaaaggctccctggccccgacccctgcagtagctcctgtggccacatct
gctgctcccttcacttttggatcatcaggttttaagccaaccatggaaaacatacctatg
tccagtaccccaaacacaggggtgaagccttcgttcccaccctcggcctcttcggtgaaa
gtcaacctgaatgagaagttcaccgctgtggcctcctctacacccattcatagctccacg
agcacaccttctgtgttgccgttctcttcctccccaaagccagcggcttctggaccactc
agccatcccacacctcttccagcatcacccagctccatacctttgaagtctccagtctct
ccctcgccatcagctggccgctccactcagactgctccaagttcagcaccctccacgggg
cagaaatcacccagagtaaaccctccagtgccaaagtcaggttcttctcaggccaaggta
cttcagcctcctgtcacagagaaacagaggcatcagtggaaagattcagaccccgtgcta
gctggaattggagaggagattgcacacttccagaaagaactagaggagttaaaggcccgg
acttccaaagcctgtttccaggttggcacctcagaagagatgaagatgctgcggacagaa
tcagatgacttgcacaccttcctttttgagattagagagaccacagagtctctccatgga
gacataagtactctgaaaacaactttgctggagggctttgctggggtcgaagaagccaga
gaacagcatggaagaaatcatgattctgggtatctccacctgctttataaaagaccactg
gatcccaagagcgaggcccagctccaggaaattcgccgccttcaccagtatgtgaaattt
gctgtccaggatgtgaatgatgtcctagacttagaatgggatcgacatctggagcagaag
aagagacagaggcgcctaattgtgccagaacgcgagacccttttcaacacactagccaac
aaccgggaaatcatcaaccagcagaggaagaggttgaatcacctggtggatagtctgcag
cagctccgtctctataaccagacgtccccatggaacctgccctcagcgctttcacctcaa
agcaatactcatagttttgacagtgaccttgaatgcctgctcaaaactaccattgaatct
cacaccaaaccttctcccagagtgccaggtaaactgtccccagcgaaacaggcccaactg
aggaacttcttggccaaaaggaagaccccaccagtgaggtccactgctccagccagcctg
tctcggtcagccttcctgtctcagaggtactatgaagacctagatgaaggcagctccaca
tcatccgtagctcaccctctggagggagaagatgcccggccaacctgcaaagaggaggag
gctgtggtcccaggccctcggcatgcccctgtggtccgcacaccttctgtccaacccaat
ctcctgcctcaggtgatgccttttgcaaagcctcacctgatccatagttcttcacctgct
gtgatgagctcttcagtctctacatcagccaccaaagttattcctcaaggagcggacagc
acaatgctggcgactaaaacagtaaagcacggtgcaccgggaccttcccatgctgtcacg
gctccccaggcagcagccgcggcagccctgagacggcacatggccagtcaggcgccaggt
atgagcactctgaccgaatcaactttgaagactgtccctcaagtggtgaatgtacaggag
ctgaagagtaattcctcacccccttctgcggccatgggttcttcggtgccgcactcagca
gccaaaaccccccatgcagtgttaaccccagtggctaacagccaagccaagcaggggtct
ctggtaaattccttcaagccaccaggacccacagcagcatcctgtcagctgtcctctggg
gataaagctctaggtccagggacagccaagacagagtctgctgtgacctcaactccatct
gctgctggacagctcaacaagcctttctcattcgcctccccagggacctttacttttggg
acaatcacaccaaacccatcttctagtttcactgccgcaccaggggcagcaccccccact
aaagagtcaaaccagcttgaagcattctcatttggtgggggaggcaaacctttttgtgag
accattcctggaaactcccccaccacaggagccgtatcagcacccagtacttctgtaaca
actgcctctctggaagagactgctccatccagcagcaaacctgcggttcctgaaactact
gtgtccactgcctctagcaaattggaaacttcaccatccaagttaggagagcttctgttc
ccaagttctcttgctggagagacgctggggagcttctcaggactgcgtgttggccaagct
gaggagcctccaaaagcagctagtaaggccggagcccagcctgccaagacctcaggggtt
agcttccctagtccttcagtgttagggaagccagtagagcccactgggacctcctctgtg
agccctgccccagcagccccggtctcagctctgaatgcaagcactagcaactcctcggca
actgtctttggcagtgtgccccttcccagtgctggaccttctgggctaatcagtttcggt
gggacctctttggctagtagcaaagctagtttctcatttggaaatcagcagactagtagt
acagcagcatcagctaccccaacaacgacctcagttgccccttcccttccagcatctttc
cctactttatcatttggtggcctcctgagttcaccatcagcttcttccctgtctatgtcc
tctggtaagagcacagaggaggccacaccaccagctgtgcctgacaagtcagaacacagt
gaagttccagcaacagcaccctcacttccagtacagccacagtcaacccagcctccccag
gcatctctgcaaacttctgaccctgtcaaaaaagaacctgttcttgtacagagcacagac
agcagcctcagcagaccagcatcttctgccaaccttgtggcatccacagagtccactcca
gtagccccagggggccctgacagcaagacagaggcagtgtctcctaccacctttgcaggg
cctggacagactgctgtggcagcagctgttctcccaggagcaagctcagcagccagcgaa
gcatctggtactcctagtacctccagcactgtctccagcagtaccccaacttctgccaca
gagacagctgcatttgggactgccacttctggctcctcggtcttcacacagccacctgct
gccagttctagctcagcgtttagccagctctccagtaacacagccactgcgccctctgcc
actcccgtgtttgggcaggtggcagccagcataagcagcacagccaccgccacaccacag
gccagcagttcaggatttggcagccctgcatttggtgcttcagctcctggagtgttcgga
cagacaccatttgggcagtctccagcctttgggcaagcaacaagtagccctgccagtagc
ttctccttcagccagcctgggttcagctctgtgcctgctttcggccagtctgcctcttct
accccagcatccaccagtgcaaatgtcttcggagccacctcaagtaccagcagtcccagt
tccttctcatttggacaggcttctactaatacaggagggacactgtttggccaaaacaac
cctcctgcttttggtcagagccccagctttgggcagggaggctctgtgtttggtggcacc
tcggccactacctctacagcagcaccttcagggtttagcttctgtcaagcctccggtttt
gggtctagtaatactggttctgtgtttggccaagcagccaatactggtggatcagtcttt
ggccagcagtcatccacttccagtggtagcgtgtttgggtctggaaatgcttcaagaggg
ggcggtttcttcagtggccttggagggaaacccagccaggatgctgccaacaaaaaccca
ttcagctccgctagtgcgggctttggatctacagctaccccaaatacctctaatctgttt
ggaaacagcggagctaagacatttggagggtttggcagctcatccttcggggaacagaag
cctgctggcacattcagctctggcggtgggagcgtagcatcccaaggttttggattttcc
actccaaataaagcaggttcgggagcagcagcaacactgcatccttcggtaccctcgcca
gtcagaatgcacccaccttcgggtccttgtcccagcagacatcaggctttgggaccccaa
gcagtggattctctgggtttggatcgggcacaggagcattcacctttggatcgtctaact
cttctgtccagggctttggcggctggagaagctgagccaatgtcagcattccctcaagtt
cctgtgagctcctgtgtgcatctctccactctcccagagcccacagcaacagactttcaa
aagaactttctcatgaaaacgctcagccaggaagaaacattggagaccaaagctcagcaa
tgcttaactaactgcctgttccccgatttcaaattttacatcaaggtttttgtctgctat
taa
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integrated database retrieval system
