Mastomys coucha (southern multimammate mouse): 116090043
Help
Entry
116090043 CDS
T07224
Symbol
Gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116090043 (Gapvd1)
Membrane trafficking [BR:
mcoc04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
116090043 (Gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
116090043
NCBI-ProteinID:
XP_031225799
LinkDB
All DBs
Position
Unknown
AA seq
1485 aa
AA seq
DB search
MVKLDIHTLAHHLKQERLYVSSEKQLIQRLNADVLKTAEKLYRTAWIAKQQRINLDRLII
TSAEASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLSRLRENPRLIASSLVAGEKL
NQENTQSVIYTVFTSLYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDPNKLIERFSPAQQEKLFGEKGS
DRFRQKVQEMVDSNEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVG
EVRAMCTDLLLACFICPAVVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGTEEGD
PRTKNSLGKFDKGCVAAFLDVVIGGRAVETPPMSSVNLLEGLSRTVVYISYSQLITLVNF
MKSVMSGDQLKEDRMALDNLLANLPQAKPGKSSSLDMTPYSTPQMSPATTPANKKNRLPI
GQQLAAITAWDSSATNLTAHIPLVTPFATRSRSRSNMLMDLHMDHEGSSQETIQEVQPEE
VLVISLGTGPQLTPGMMSENEVLNMQLSDGGQGDVPVDENKLHGKPDKTLRFSLCSDNLE
GISEGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKF
EIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNVDEDRLQEIAGAAAENVLGSLLCLPG
SGSVLLDPCTGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGLGSTSDDTDV
REVSSRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDMDDIAHGAHQ
LTSPPSQSESLLAMFDPLSSHEGASAVVRPKVHYARPSHPPPDPPILEGAVGGNEARLPS
FGSHVLTAAEMEAFKQRHSYPERLVRSRSSDIVSSVRRPMSDPSWNRRPGNEELPPAAAT
GATSLVAAPHSSSSSPSKDSSRGETEERKDSDDERSDRSRPWWRKRFVSAMPKAPIPFRK
KEKQEKDKDDLGPDRFSTLTDEPSPRLSAQAQVAEDILDKYRNAIKRTSPSEGAMANDES
AEVMGDGESAHDSPREEALQNISADDLPDSASQAAHPQDSAFSYRDVKKKLRLALCSADS
VAFPVLTHSTRNGLPDHTDPEDNEIVCFLKVQIAEAINLQDKSLMAQLQETMRCVCRFDN
RTCRKLLASIAEDYRKRAPYIAYLTRCRQGLQTTQAHLERLLQRVLRDKEVANRYFTTVC
VRLLLESKEKKIREFIQDFQKLTAADDKTAQVEDFLQFLYGAMAQDVIWQNASEEQLQDA
QLAIERSVMNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHRALQIPEVYLREAP
WPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKA
NPPCLLSTVQYISSFYASCLSGEESYWWMQFTAAVEFIKTIDDRK
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctagatattcatacattggcccaccacctcaagcaggagcgcttatacgtg
agttctgagaaacagctcattcagaggctaaacgccgatgtactgaagacagctgaaaag
ctgtatcgaacagcatggattgcaaagcaacagaggattaatttggatcgtcttattata
accagcgctgaagcttcccctgctgaatgttgccagcatgccaagattttggaagataca
cagtttgttgatggatataagcaactgggatttcaggaaacagcttatggagagttcctg
agtcggttaagagaaaatccacgtcttattgcctcctctttggttgctggagaaaaactc
aatcaggagaacacacaaagtgttatctacactgtttttacctccttgtatggcaactgt
attatgcaagaagatgaaagctacctccttcaggttttacgatacttgattgaatttgaa
cttaaagaaagtgacaaccccaggcgccttttgaggagaggaacttgtgccttcagcatc
ttatttaaacttttttctgaaggactattttctgccaaacttttccttacggctacttta
catgagccaatcatgcagctccttgtagaagatgaagaccatctggaaacagatccaaac
aagctaattgagagattctctccagctcagcaggaaaaactctttggagagaaaggctca
gatagatttaggcaaaaggttcaagaaatggtagattccaatgaagctaaactagtggct
ttggtgaacaaatttattggttatcttaaacagaatacatactgctttccacatagtttg
aggtggattgtgtcacagatgtacaaaactctttcttgtgtagacagattggaggttggg
gaggtcagagcaatgtgtaccgatcttctgttggcttgcttcatttgtcccgcagttgtt
aatccagagcagtatggaataatatctgatgcacctattaatgaggtggcaagatttaac
ctgatgcaggttggccgccttttgcagcagttagcaatgactggcactgaagaaggagat
ccccggaccaaaaatagccttggaaaatttgacaaaggctgtgttgctgctttccttgat
gttgtaattgggggccgtgcagtggagactccgccaatgtcttctgttaatcttctggaa
ggcttgagcagaactgtggtgtatataagttacagtcagcttattactctggtaaatttt
atgaagagtgtgatgtctggagatcaactgaaagaagatagaatggctcttgataatttg
ttggcaaacctgccccaggctaagccagggaagagcagcagtctcgacatgactccttac
agcactcctcagatgtctccagctaccactccagccaacaaaaaaaatcggttacctata
ggacaacagttagcagccatcactgcctgggattcttcagccaccaatcttactgctcat
attcctctagtaaccccatttgcaactcggagcagaagccgaagtaatatgctgatggac
ctacatatggaccatgaaggatcatctcaagaaaccatccaggaggtgcagccagaagag
gtgctggtcatttccttagggacaggccctcagctcactccagggatgatgtcagaaaat
gaggttctaaacatgcagctttcggatggaggacaaggagatgtccctgttgatgaaaac
aaactccacggtaaacctgataaaaccttgcgcttttccctctgcagtgataatctggaa
ggcatatctgaaggtccttccaatcgctccaattcagtgtcttctctggacctggaagga
gagtctgtgtctgagcttggggcaggaccttctgggagtaatggagttgaagcactgcag
ttgttagaacatgagcaagctacaacacaagataatcttgatgataaattgaggaagttt
gagattcgtgacatgatgggactaacagatgacagggacatatcggagacagtgagtgag
acctggagcaccgatgtcctgggaagtgactttgacccgaatgttgatgaagaccgtttg
caagagattgcaggtgcagcagcagagaatgtgttaggcagtttgctatgccttccaggt
tcagggtcagttctccttgacccttgcactggctctaccatatcagagaccacaagtgaa
gcgtggagcgtggaggtattgccaagtgattcagaggctccagacttaaagcaggaagag
cgcctccaagagctggagagctgttctggactgggcagcacgtctgatgatacggatgtc
agggaggtcagttcccgccccagcacaccaggcctcagtgttgtgtccggtataagtgct
acatcggaggatattcccaataagatcgaggacctgaggtctgagtgcagttctgatttt
gggggtaaagattctgtaactagtccagatatggatgacatagcccatggcgctcaccag
ctgacctcccctccctctcagtcagagtctctacttgccatgtttgatccactatcctca
catgaaggggcctctgctgtggtaaggccaaaggttcactatgcccggccctcgcatcca
cctccggatcctccaatcctggaaggtgcagtgggaggaaatgaagccaggttgcccagc
ttcggttctcacgttttaactgcagctgaaatggaggcgttcaagcagagacactcttac
cctgagagactggttcgcagcagaagctctgatatagtatcttccgtgcggcggcccatg
agtgaccccagctggaaccggcgcccagggaatgaagaactccctccagctgcagccact
ggtgctacttctttggtggctgcacctcactcgtcatcttcgtccccgagtaaggactct
tcaagaggagagactgaggagcgcaaggacagtgacgatgagaggtcagacaggagcagg
ccttggtggagaaagcgctttgtttcagctatgcctaaagctcctataccatttagaaag
aaagaaaaacaagaaaaagacaaagatgatctggggcctgacagattctcaacactcaca
gatgagcccagccctaggctcagtgctcaagctcaggttgctgaagatattctggacaaa
taccggaatgccattaaacggaccagccccagtgaaggagcaatggcaaatgatgagagt
gcagaagtcatgggtgatggtgaaagtgctcatgactctcctcgtgaggaagcattgcag
aacatctcagctgatgatctcccagactctgccagccaagcagcccaccctcaggactct
gctttttcttacagagatgtaaaaaagaagctgaggctcgcactttgctctgcagactct
gtggccttcccagtgctaacacactcaacaaggaacggattgccagatcatacagaccca
gaagacaatgaaattgtatgcttcttaaaagttcaaatagctgaagcaattaatttacaa
gataagagcttaatggctcaacttcaagaaacaatgcgttgtgtgtgccgctttgacaat
aggacctgtaggaagttgctggcatccattgctgaagactacagaaaaagagctccgtat
attgcttatctcacccgctgccgacaaggactgcagaccacacaggctcacttggaaagg
ctcctgcaaagagttttgcgggacaaagaggtggccaatcgttactttaccactgtctgt
gtgcggttactacttgagagcaaagaaaaaaagatcagggagttcattcaagactttcag
aaacttactgctgctgatgataagacagctcaggtagaggattttctacagttcctgtat
ggggcgatggctcaagatgtcatttggcagaatgccagtgaggagcagctgcaggatgcc
cagctggccatcgagcggagtgtgatgaatcggatcttcaagcttgctttctaccctaac
caggatggggacatacttcgtgaccaggttctgcatgaacatatccagagattatctaaa
gttgtgactgcaaaccacagagctctgcagattcctgaggtttatcttcgtgaggcaccg
tggccatctgcacagtcagaaatcaggacaataagtgcttacaaaaccccccgggacaaa
gtgcagtgcatcctgagaatgtgctccaccattatgaacctcctgagcctggccaatgag
gactctgtccccggggcagatgactttgttcctgtgttggtgtttgtattgataaaggca
aacccaccctgccttctgtccaccgtgcagtacatcagcagcttctatgccagctgtctg
tctggagaggagtcctactggtggatgcaattcacagcagccgtggagtttattaaaacc
atcgatgacagaaagtga
DBGET
integrated database retrieval system
