Mastomys coucha (southern multimammate mouse): 116090232
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Entry
116090232 CDS
T07224
Symbol
Ifih1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1 isoform X1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04622
RIG-I-like receptor signaling pathway
mcoc05161
Hepatitis B
mcoc05162
Measles
mcoc05164
Influenza A
mcoc05168
Herpes simplex virus 1 infection
mcoc05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
116090232 (Ifih1)
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
116090232 (Ifih1)
05171 Coronavirus disease - COVID-19
116090232 (Ifih1)
05164 Influenza A
116090232 (Ifih1)
05162 Measles
116090232 (Ifih1)
05168 Herpes simplex virus 1 infection
116090232 (Ifih1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mcoc04054
]
116090232 (Ifih1)
Enzymes [BR:
mcoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116090232 (Ifih1)
Pattern recognition receptors [BR:
mcoc04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
116090232 (Ifih1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
CARD_2
RIG-I_C
ResIII
Helicase_C
DEAD
CARD
SNF2-rel_dom
SWI2_SNF2
DUF3638
AAA_19
Motif
Other DBs
NCBI-GeneID:
116090232
NCBI-ProteinID:
XP_031226287
LinkDB
All DBs
Position
Unknown
AA seq
1026 aa
AA seq
DB search
MSIVCSTEDSFRYLLSIFRPRLKMYIQVEPVLDYLIFLPAETKEQIHKKITTCGNTSAAE
LLLSTLEQGQWPLGWTQMFVEALDRSGNPLAARYVKPTLTDLPSPSSETAHDECLHLLNL
LQPTLVDKLLINDVLDTCFEKGLLTVEDRNRISAAGNSGNESGVRELLRRMVQKENWFST
FLDVLRQTGNDALFQELTGVGCPEDSADLDNSSHSDGPAANEPLLPDDVDASSLETEAQN
LEDASPETSLADSSVTAESDTSLAEGSVSCFDESLGHNSNMGRDSGTMGSDSDESIIGTN
RASPEPELQLRPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYITKHHLDKKQQASESGK
VIVLVNKVMLAEQLFRKEFNPFLKKWYRIIGLSGDTQLKISFPEVVKSYDVIISTAQILE
NSLLNLESGEDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLRNNVLKKQNKPA
IPLPQILGLTASPGVGPAKKQSEAEKHILSICANLDAFTIKTVKENLGQLKHQIKEPCKK
FVIADDTRENPFKEKLLEIMASIQNYCQKSPMSDLGTQHYEQWAIQMEKKAAKDGNRKDR
VCAEHLRKYNEALQINDTIRMIDAYNHLDTFYTDEKEKKFAALNASDESDDEASSRNDQL
KGNVKKSLKLDETDEFLMNLFFDNKKMLKKIAENPKYENEKLIKLRNTILEQFTRSEESS
RGIIFTKTRQSTYALSQWIMENAKFVEVGVKAHHLIGAGHSSEVKPMTQTEQKEVISKFR
TGEINLLIATTVAEEGLDIKECNIIIRYGLVTNEIAMVQARGRARADESTYVLVTSSGSG
VTEREIVNDFREKMMYKAINRVQNMKPEEYAHKILELQVQSILEKKMKVKRSIAKQHNND
PSLITLLCKNCSMLVCTGENIHVIEKMHHVNMTPEFKRLYIVRENKALQKKFADYQTNGE
IICKCGQSWGTMMVHKGLDLPCLKIRNFVVNFKNNSSKKQYKKWVELPIRFPDLDYSEYC
LYSDED
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcgtctgttctacagaggacagcttcaggtatctcctctcaatcttcaggccc
aggttgaaaatgtacattcaggtggagccggtgctggactacctcatctttctgccggca
gaaaccaaagagcagattcataaaaagatcaccacctgtggtaacaccagcgcagcagaa
ctgctgctgagcaccttggagcagggacagtggccgctgggatggacgcagatgttcgtg
gaggccctggatcgcagcggcaaccccttggccgcgcgctatgtcaaacccacactcact
gatctgccctctccttcttctgagacggcccatgatgagtgtctccacttgctgaacctt
ctccagcccactttggtggacaagcttctgattaacgatgtcttggacacttgcttcgag
aagggactgttgacagtcgaggacagaaatcggatttctgctgcaggaaatagtggaaat
gagtcaggtgtgagagaactgctgagaaggatggtgcagaaagaaaactggttttctact
ttcctggatgttcttcgccaaactggaaatgatgcactattccaagagctgacaggtgtg
ggctgcccagaagacagcgcagacttggataactcgtcccacagtgatgggcctgcagct
aacgagccccttttgcctgatgatgtcgatgcatcaagtctggagacagaggcccagaac
ttagaggatgcttcaccagagacttctcttgcagattcttctgtgaccgcagaatcagac
acaagtttggcagaaggaagtgtcagctgcttcgatgaaagtcttggacataacagcaac
atgggcagggattcaggcaccatgggaagtgattcagatgaaagtatcatcgggacaaac
agagcatcccccgagccagaactgcagctcaggccttaccaaatggaagtggcccaacca
gctctggaggggaagaatattattatctgcctccccacggggagtgggaaaaccagggtg
gctgtttatatcaccaaacatcacttagacaagaagcagcaggcgtctgaatccgggaag
gttattgtccttgtcaataaggtaatgttagcagaacaacttttccgcaaagagttcaac
ccatttttgaagaaatggtatcgcattattggattaagcggtgatacccagctgaaaata
tcgtttccagaagttgtcaaatcttatgatgttattatcagcacagctcaaatccttgaa
aactccctcttaaatctggagagtggagaagatgacggtgtgcagctgtcagacttttcc
ctcattatcattgatgaatgtcaccacaccaacaaggaggcagtctataacaacatcatg
agacggtatttgaagcagaagctgagaaacaatgtcctcaagaaacaaaacaaaccagca
attcccctgccgcagatactaggactgacagcttcacctggtgtcggaccagccaaaaag
caatctgaggctgaaaaacatattttaagtatatgtgccaatcttgatgcctttaccatt
aaaacagtgaaagagaatcttggtcaactcaaacaccaaataaaggaaccatgcaagaag
tttgtgattgctgatgacaccagagaaaatccatttaaagagaaacttctagaaattatg
gcaagcattcaaaattactgccaaaagagtccaatgtcagacttgggaacccagcattat
gagcaatgggccattcaaatggaaaaaaaagctgctaaagatggaaatcgcaaagatcgc
gtctgtgcagaacatttgaggaagtacaacgaagccctacaaatcaacgacacgatccga
atgattgacgcgtacaaccacctggacacgttctacactgatgagaaagaaaagaagttt
gcagccctcaatgccagcgatgagagtgacgacgaggccagcagtcgcaatgaccaactt
aagggcaatgtaaagaaatctttgaaactggacgaaactgatgaatttctcatgaatttg
ttctttgataacaagaaaatgttgaaaaaaatagctgaaaacccaaaatacgaaaatgaa
aaactcattaaattaagaaacacaatactggaacaattcacaaggtctgaggagtcctcc
agaggaattattttcacaaaaacgcggcagagcacctatgcactttcccagtggattatg
gaaaacgcaaagtttgtggaagttggagtcaaagcgcatcacctaattggagcaggacac
agcagtgaggtcaagcccatgactcagactgaacaaaaagaagtcattagtaaatttcgc
actggggaaataaatctgctcattgctactacggtggccgaggaaggcctggatatcaaa
gaatgcaatatcattatccgctacggccttgtcacgaatgagatagccatggtccaggcc
cggggtcgagccagagccgatgagagcacctacgtcctggttaccagcagtggttcagga
gttaccgaacgggagattgttaacgatttccgagagaagatgatgtataaagctattaac
cgtgttcaaaatatgaagcccgaggagtatgcacataagattttggaattgcaggtacaa
agtatcttggaaaagaaaatgaaagtcaaaagaagtattgcaaagcaacacaacaatgat
ccatccttaataacacttctctgcaaaaattgtagtatgctggtctgcacaggagaaaat
atccatgtaattgagaagatgcatcatgtcaatatgacaccagaattcaagagactctac
attgtaagagaaaacaaagcactgcagaagaaatttgctgattatcagacaaatggagag
attatctgcaaatgtggccaatcttggggaacaatgatggtgcacaaaggtttagatttg
ccttgtcttaaaataaggaattttgtagtcaatttcaaaaataactcatcgaagaaacag
tacaagaagtgggtggaattgccgatcagattccctgaccttgactactcagaatactgc
ttgtacagtgatgaagactag
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integrated database retrieval system
