Mastomys coucha (southern multimammate mouse): 116090245
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Entry
116090245 CDS
T07224
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
116090245
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mcoc04040
]
116090245
Ion channels [BR:
mcoc04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
116090245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
ATP-synt_B
GPHH
IQ
HB_ELP1
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
116090245
NCBI-ProteinID:
XP_031226317
LinkDB
All DBs
Position
Unknown
AA seq
2006 aa
AA seq
DB search
MAQSVLVPPGPDSFRFFTRESLAAIEQRIAEEKAKRPKQERKDEDDENGPKPNSDLEAGK
SLPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKAISRFSATSALYILTPFNPIRK
IAIKILVHSLFNVLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSTFDMNITSFYNNSL
DWNGTAFNRTMNMFNWDEYIEDKSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAASAESRDFSGAGGI
GVFSESSSVASKLSSKSEKELKNRRKKKKQKEQAGEEEKEDAVRKSASEDSIRKKGFRFS
LEGSRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRASLFSFKGRVKDIGSENDFADDEHST
FEDNDSRRDSLFVPHRHGERRPSNVSQASRASRGIPTLPMNGKMHSAVDCNGVVSLVGGP
SALTSPVGQLLPEGTTTETEIRKRRSSSYHVSMDLLEDPTSRQRAMSMASILTNTMEELE
ESRQKCPPCWYKFANMCLIWDCCKPWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAME
HYPMTEQFSSVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIVSLSLMELG
LANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVG
MQLFGKSYKECVCKISNDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMC
LTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVGRMQKGIDFVKR
KIREFIQKAFVGKQKALDEIKPLEDLNNKKDSCISNHTTIEIGKDLNYLKDGNGTTSGIG
SSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDMEESKEKLNATS
SSEGSTVDIGAPAEGEQPEAEPEESLEPEACFTEDCVRKFKCCQISIEEGKGKLWWNLRK
TCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEMLL
KWVAYGFQMYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSR
FEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINYTTGEMFDVSV
VNNYSECQALIDSNQTARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNVEL
QPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYN
AMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQVFDISIMILICLNMVTMMVETDDQSQEM
TNILYWINLVFIVLFTGECVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAELIEKYF
VSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGM
SNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPEKDHPG
SSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFY
EVWEKFDPDATQFIEFCKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILF
AFTKRVLGESGEMDALRIQMEERFMASNPSKVSYEPITTTLKRKQEEVSAIVIQRAYRRY
LLKQKVKKVSSIYKKDKGKEDEGTPIKEDIITDKLNENSTPEKTDVTPSTTSPPSYDSVT
KPEKEKFEKDKSEKEDKGKDIRESKK
NT seq
6021 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatcagtgctggtaccgccaggacctgacagcttccgcttctttaccagggaa
tcccttgctgctattgaacaacgcattgcagaagagaaagctaagagacccaaacaggaa
cgcaaggacgaagatgatgaaaatggcccaaagccaaacagtgacttggaagcaggaaaa
tcccttccttttatttatggagacattcctccagagatggtgtcagagcccctggaggac
ctggatccctactatatcaataagaaaacctttatagtattgaataaagggaaagcaatc
tcccggttcagcgccacctccgccctgtacattttaactcccttcaaccccattagaaaa
atagctattaagattttggtacattctttattcaatgtgcttatcatgtgcacaattctt
accaactgtgtatttatgaccatgagtaaccctccagactggacaaagaatgtggagtat
acttttacaggaatttatacttttgaatcacttattaaaatacttgcaaggggcttttgt
ctagaagatttcacatttctacgggatccctggaattggctggatttcacagtcattact
tttgcatatgtgacagagtttgtggacctgggcaatgtctcagcgctgagaacgttcaga
gttctccgagcattgaaaacaatatcagtcattccaggcctgaagaccatcgtgggggcc
ctgatacagtcggtgaagaagctgtctgacgtcatgatcctcactgtgttctgtctcagt
gtgttcgcactaattgggctgcagctcttcatgggcaacctgcggaataaatgcttgcag
tggcccccagacaattctacctttgacatgaacatcacttccttctataataattcattg
gattggaatggtactgccttcaataggacaatgaacatgtttaactgggatgaatatatt
gaagataaaagtcacttttattttttggaaggacaaaacgatgctctgctttgtggcaac
agctcagatgctggccagtgtccggaaggatacatctgtgtgaaggctgggagaaacccc
aactacggctatacgagttttgataccttcagctgggccttcttgtccttatttcgtctt
atgactcaagacttctgggaaaacctttatcagctgaccttgcgtgctgctgggaaaaca
tatatgatattttttgtgctcgtgattttcttgggttcattctacttaataaacttgatc
ctggctgtggtggccatggcctacgaggaacagaaccaggccacactggaggaagctgaa
caaaaggaggcggagtttcagcagatgctggagcaacttaagaagcagcaggaagaggct
caggcagcagctgccgcagcgtccgcagaatccagagacttcagcggagcaggtgggata
ggcgttttctcggagagttcttcagtagcatcaaagttaagttccaagagtgaaaaggag
ctgaaaaacagaagaaagaaaaagaaacagaaagagcaggctggagaggaagagaaggaa
gatgcagtgaggaaatctgcctctgaagacagcatacgaaagaaaggcttccggttttcc
ctagaaggaagtagactgacctacgagaagaggttttcctctccacaccagtctctcttg
agcatcagaggctcccttttttctccaagacgcaacagtagagcaagccttttcagcttc
aaaggtcgagtgaaggatattggttctgaaaatgacttcgccgacgatgaacacagcacg
tttgaggacaacgacagcaggagagactccctatttgtaccacacagacatggagaaaga
cgtcccagcaacgtcagccaagccagccgtgcctcccggggaatacccactctccccatg
aatgggaagatgcacagtgcagtggattgcaatggcgtggtctccctggttggaggccct
tctgcgctcacatctcctgtgggacagctactaccagagggcacaactactgagacagaa
ataaggaagaggaggtccagttcttaccatgtttctatggacttgttggaagaccctaca
tcaaggcaaagagcaatgagcatggccagcattctgaccaacactatggaagaacttgaa
gaatccagacagaaatgccctccctgctggtataaatttgctaatatgtgcctgatttgg
gactgttgtaagccatggctaaaggtaaaacacgttgtcaatctggtagtgatggatcca
tttgttgacctggccatcaccatctgcattgtgttaaacactctcttcatggccatggag
cactaccccatgactgagcagttcagcagtgtgctgtctgttgggaatttggtcttcact
gggatcttcacagctgaaatgtttctcaagattatagctatggatccatattattacttc
caagaaggctggaatatctttgatggctttatagtgagccttagtttaatggagctcggc
ttggcaaatgtggaaggattgtcagttctccgatcattccggctgcttagagtcttcaaa
ttggcaaaatcctggcccacactgaatatgctcattaagatcattggcaactcagtgggt
gcactgggcaacctgaccctggtgttggccatcattgtcttcatttttgccgtggtcggc
atgcagctgtttggaaagagctacaaggagtgtgtctgcaagatttccaatgattgtgaa
ctcccacgctggcacatgcacgacttcttccactccttcctgatcgtgttccgtgtgctg
tgtggggagtggatagagaccatgtgggattgcatggaggtcgcgggccagaccatgtgc
cttactgtcttcatgatggtcatggtgattgggaaccttgtcgttctgaacctcttcttg
gccttactcctcagttctttcagctcggacaacctggctgccacagatgacgataacgaa
atgaacaacctccagatagccgtgggaaggatgcagaagggaattgactttgttaaaagg
aagattcgtgagttcattcagaaagcctttgtcggaaagcagaaagctttagatgaaatc
aaaccccttgaagatctgaataacaagaaagacagttgtatctccaaccacacaaccata
gaaataggcaaggacctcaattacctcaaagatggaaatgggacgaccagtggcatagga
agcagtgtggagaagtacgtggtagatgagagtgattacatgtcgttcataaacaacccc
agcctcactgtgaccgtgcccattgccgttggagagtctgactttgaaaacttaaataca
gaagaattcagcagtgaatcagatatggaagaaagcaaggagaaattgaatgcaactagt
tcatctgagggcagtacagttgatataggtgctccggcagagggagagcaaccagaagct
gaaccagaagagtcccttgagccagaagcctgtttcacagaagactgtgtgagaaagttc
aagtgttgtcagataagcatagaagagggcaaaggcaaactctggtggaacttgaggaaa
acgtgctacaagatagtagagcacaactggtttgaaaccttcatcgtcttcatgattcta
ctcagcagcggtgctctggcctttgaagacatttacatcgagcagcgaaagaccatcaag
accatgctggaatatgctgacaaggtcttcacgtacatcttcatcctagagatgcttcta
aagtgggttgcatatggattccaaatgtacttcaccaatgcctggtgctggctggacttc
ctgatcgttgatgtctcactggttagcttaactgcaaatgccttgggctactcagaactt
ggtgccatcaaatctctccgaacattaagagcactgaggcctctacgagccttatcccga
tttgaaggaatgagggttgttgtaaatgctctcctaggcgccatcccatccataatgaat
gtacttctggtctgcctgatcttttggctaatattcagtatcatgggagtgaatctcttt
gctggcaagttctatcattgcatcaactacaccactggggaaatgtttgatgtgagcgtg
gtcaacaactacagtgaatgccaagctctcatagacagcaatcagacagccaggtggaag
aatgtgaaagtcaacttcgacaatgtgggacttggatatctttctctgcttcaagtagcc
acatttaaaggatggatggatatcatgtatgcagctgttgactcaagaaatgtagaactg
caacccaaatatgaagacaatctatacatgtacctttactttgtcatctttattattttt
ggctcattcttcacactaaacctgttcatcggtgtcatcatagataacttcaaccagcag
aaaaagaagtttggaggtcaagacatttttatgacagaagaacagaagaaatactacaat
gcaatgaagaagttgggctcaaagaaaccgcaaaaaccgatacctcgtcctgctaacaaa
tttcaaggaatggtctttgattttgtaaccaaacaagtctttgatatcagtatcatgatc
ctcatctgcctcaacatggtgaccatgatggtggaaacggatgaccagagtcaggagatg
accaacatcctgtactggatcaacctggtgttcattgtcctgttcacaggagagtgcgtg
ctgaagctaatctccctccgctattattatttcaccattggatggaatatttttgatttt
gtggtggtcattctctccattgtaggaatgtttcttgctgagctgatagagaagtatttt
gtgtcccctaccctgttccgagtcatccgcttggccaggattggacgaatcctacgcctg
atcaaaggcgccaaggggatccgcacgctgctctttgctctgatgatgtcccttcctgcg
ctgttcaacatcggcctcctgcttttcctggtcatgttcatctacgccatctttgggatg
tccaactttgcctacgttaagagggaagttgggattgatgacatgttcaactttgagacc
tttggcaacagcatgatctgcctgttccaaatcaccacctctgcgggctgggatggactg
ctggcccctatactaaatagtggaccgcctgactgtgaccctgaaaaggatcaccctgga
agctcagtgaagggagactgtggcaacccatctgtggggattttcttttttgtcagctac
atcatcatatccttcctggttgtggtgaacatgtacatcgctgtcattctggagaacttc
agtgttgccactgaagaaagtgcagagcccctgagtgaggacgactttgagatgttctac
gaggtctgggagaagttcgaccctgatgccactcagttcatagagttctgcaagctctct
gactttgcagcagctctggatcctcccctcctcatcgcaaagccaaacaaagtccagctc
attgccatggacctgcccatggtgagtggggaccgcatccactgcctggacatcttattt
gcttttacaaagcgtgtcttgggtgagagcggagagatggatgctcttcgaatccagatg
gaagagcggttcatggcttccaatccctccaaggtctcttatgagcccattaccaccact
ctgaaacgcaaacaagaggaggtatctgctattgtcatccagagagcatacaggcgctat
ctcctgaagcagaaagttaagaaggtttcgtctatatataaaaaagacaaaggtaaagaa
gatgaggggacacccatcaaagaagacatcatcactgataaactgaatgagaattcaact
ccagagaagactgatgtgacaccttccaccacttccccaccttcctacgatagcgtgacc
aaaccggagaaggaaaaatttgaaaaggacaaatcggaaaaagaggacaaggggaaagat
atcagggaaagtaaaaagtaa
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integrated database retrieval system
