Mastomys coucha (southern multimammate mouse): 116090252
Help
Entry
116090252 CDS
T07224
Symbol
Ttc21b
Name
(RefSeq) tetratricopeptide repeat protein 21B isoform X1
KO
K19673
tetratricopeptide repeat protein 21B
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mcoc03037
]
116090252 (Ttc21b)
Cilium and associated proteins [BR:
mcoc03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
116090252 (Ttc21b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_TT21_2nd
ARM_TT21_C
ARM_TT21_N
ARM_TT21_5th
ARM_TT21
ARM_TT21_4th
TPR_19
TPR_14
TPR_2
TPR_16
TPR_1
TPR_8
TPR_12
TPR_11
ANAPC3
CFAP70_TPR_C
TPR_7
TPR_6
TPR_CcmH_CycH
TPR_9
CFAP70_mid_TPR
TPR_21
TPR_Slam
PknG_TPR
DUF6584
SPOB_a
TPR_Psidin_N
HAT_PRP39_C
YfdX
Motif
Other DBs
NCBI-GeneID:
116090252
NCBI-ProteinID:
XP_031226342
LinkDB
All DBs
Position
Unknown
AA seq
1315 aa
AA seq
DB search
MDSQGLKTLINYYCQERYYHHVLLVASEGMKKYSSDPVFRFYHAYGTLMEGKAQEALREF
EAIKNKQDVSLCSLMALMYVHKMSPNPDREAILELDTKMKEQRKEAGRKALYHAGLFLWH
IGRHDKAREYIDRMSKMPHDSNEGPILKAWLDITRGKEPYAKKALRYFEEGLQDGNDIFA
LLGKVLCLEVRQNYSGALETVSQIIVNFPSFLPAFEKKMKLQLALQDWDQTVETAQRLLL
QDSHNVEALRMLALYYLCREGDIEKAATKLENLGNALDIMEPQNAQLFYKITIAFSRTCG
RNQLILQKVQSFLEKAFSLTPQQAEIATELGYQMILQGKVKEAWKWYRTAMTLNESNISA
VTGLIRCQLIEGQLQDADQQLEFFSEFQQSMGKSAELMYLHAVLATKKNNRQEEVINLLN
DVVNTHFSHLEDLPLGIQYFEKLNPDFLIEVVTEYLNLCPIQPAGPGQPLSPVLRRCSSV
LETIIRSVPGLPQAVFLMAKVKYLSGDIEAAYNNLQHCLEHSPSYAEAHLLMAQVYLSQD
KVKLCSQSLELCLSYNFNVRDYPLYHLIKAQSQKKMGEVAEAIKTLHMAMNLPGMRRSRA
SSKSKHRAEVDASHRLSIFLELVEVHRLNGEQHEAAKVLQDAIHEFSGTCEELRVTIANA
DLALAQGDTERALSMLRNVTTEQPYFIEAKEKMADIYLKHRKEKMLYITCYREIAERMPS
PRSFLLLGDAYMNIQEPEEAIVAYEQALNQNPKDGTLARKIGKALVKTHNYSKAITYYEA
ALKSGQQNCLCYDLAELLLRLKLYEKAEKVLQHSLAHEPVNELSALMVDGRSQVLLAKVY
SKMERPSDAIAALQQARELQSRILKRVQMEQPDAVPSQKHFAAEICAEIAKHSAAQRDYE
KAITFYREALVHCETDSKIMLELAQLYLAQEDLDASLRHCALLLQRDQDNEPATMLMADL
MFRKQDYEQAVFHLQQLLERKPDNFMTLSRLIDLLRRCGKLDDVPRFFSMAEKHNSRTKL
EPGFQYCKGLHFWYTGEPNDALRHFNKARKDSDWGQNALYNMIEICLNPDNETIGGEVFE
NLNGDLGTSPEKQESVQLAVRTAEKLLKELKPQTVQGCLQLRIMENCCLMATKQKSSVEQ
ALNTFTEIAASEKDHIPALLGMATAYMILKQTPKARNQLKRIAKMTWNPIEAEDLEKSWL
LLADIYIQSAKYDMAEELLKRCLCHNRSCCKAYEYMGYIMEKEQAYTDAAFNYEMAWKHS
NQTNPAVGYKLAFNYLKAKRYVDAIDVCHQVLEAHPTYPKIRKDILDKARASLRP
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atggactcccaggggctgaagacactgattaattactattgtcaagagagatattatcac
catgtgctccttgttgccagtgaagggatgaagaagtatagcagcgacccagtcttccga
ttttaccatgcctatggcacactcatggaaggtaaagctcaagaagcccttcgggagttc
gaggccattaaaaataaacaagacgtgtcactgtgttctctgatggcactgatgtatgtc
cataaaatgagtcccaatccagatagagaagctatcctggaattagataccaaaatgaag
gaacaacgtaaggaagcgggacgcaaagccctgtaccatgcgggcctgtttttatggcac
attggtcgccatgataaggcgagagaatatattgacagaatgtcaaaaatgccacatgat
agcaacgagggaccgattttgaaagcctggcttgatattacaagagggaaggaaccttac
gctaaaaaggccctacggtattttgaggagggattacaagatggaaatgatattttcgct
ctgctgggtaaggttctgtgcctggaggtgcgacagaattactccggagctctggagacc
gtgagccagataattgtaaactttccaagcttccttcctgcctttgagaagaaaatgaaa
ttacaactggctttgcaggattgggatcagacggtggagacagcgcaaaggctgctgctt
caagacagtcacaatgtggaggcactaaggatgctggctttatattacctgtgtagggaa
ggagacatagagaaggctgctaccaagctggaaaatttaggaaatgcattggatatcatg
gaaccacagaatgctcaacttttttataagattacaatagccttcagcagaacctgtgga
cgtaatcaactcattctccaaaaagttcaaagtttcctagaaaaagcatttagtttaacc
ccccagcaagcagaaattgctacagagctcggctaccaaatgattctccaaggcaaggtt
aaggaggcctggaagtggtacaggaccgccatgacgctgaacgagagcaacatctccgcc
gtcactggacttatccgatgtcagttaatagaggggcaattgcaagatgcagaccagcag
ctagagttcttcagtgaattccagcagtcaatgggaaaatctgcggaattaatgtatttg
cacgcggttcttgctacaaaaaaaaataatcgacaggaagaagttataaatttgttgaat
gatgttgtgaacactcatttttcacacttggaagacctccctctcggcatacagtatttt
gagaagctcaaccctgacttcttaatagaagttgttaccgagtatctgaatctctgtcca
attcagcctgcaggtcctggacagcctctttctccagttctcagacgttgttcttcagtc
ctggagacgattataaggagtgtgccaggtcttccacaagctgtcttcctaatggccaaa
gtgaagtatttgtcaggtgacattgaggcagcctacaacaatctgcaacactgcctggag
cacagcccctcctatgcagaggctcacctcctcatggcacaggtgtacctgtcccaagac
aaagtcaagctctgctctcagtcacttgaactctgtctgagctacaattttaatgtgaga
gactatccattatatcatttaatcaaagcacagtcacaaaagaaaatgggagaagtggca
gaagcaattaaaactctgcacatggcaatgaacctaccaggaatgaggagaagtcgagcc
tcctcaaaatcaaagcacagagctgaggtggatgcaagccatcggttatccatctttctg
gagttggtggaggttcaccgcttaaatggagaacagcatgaggcagcaaaggttttacag
gatgccatccatgagttttctggaacttgtgaagaattgcgtgtcacaattgctaatgca
gacctggctctggcccaaggagatacggagcgtgcattaagcatgcttcgaaatgtcaca
accgaacagccttattttatagaggccaaagaaaaaatggcagatatttatctgaagcat
aggaaagagaaaatgttgtatatcacttgttacagagaaattgctgaaagaatgcccagc
ccccggtctttcctgctcctcggtgatgcatacatgaacattcaagagcctgaagaagcc
atcgtggcctatgagcaagcattaaatcagaacccaaaagatggaacactggcaagaaaa
attgggaaagcacttgtcaaaactcacaattactcaaaggcaatcacctattatgaagct
gctctgaaaagtggacagcagaattgcctttgctatgacctggccgagctcctactgaga
ctgaagttgtacgagaaagcagagaaagttctccagcactctctagctcatgagcctgta
aatgagttgtcggctctcatggtggatgggcggtcccaagtccttctagcaaaagtttac
tctaaaatggagagacccagtgacgcgattgccgcattgcagcaggctcgggaactacag
tctcggatactgaagcgagttcagatggagcagccagatgcggttccctcacagaaacac
ttcgcagctgaaatttgtgcagagattgcaaaacactctgctgctcagagagactatgaa
aaagcaattaccttttatagagaggccctggttcattgtgagacagatagtaagataatg
ctggaactggcacagttatacctggcccaagaagacctcgatgcctccctgcggcactgc
gcactgcttctccagagggatcaggacaatgaacccgccaccatgttgatggccgacctc
atgttcagaaaacaggactatgaacaagcagtgtttcatttgcagcagcttttagaacga
aaaccagataattttatgactttgtctcgtttgattgatctcctgagaagatgtgggaaa
cttgacgatgttccgagatttttctcgatggctgagaaacacaactccagaacaaaattg
gagccaggatttcagtactgtaaaggattacatttttggtatactggagaaccaaatgat
gcccttcgacattttaacaaagctcggaaagatagtgactggggtcaaaatgcactttat
aatatgatagaaatctgcttgaatccagacaatgaaactattggaggtgaagtgtttgaa
aacctgaatggagacctaggcacttcccctgagaagcaggagtctgtgcagttagcagtg
aggacagcagaaaagctccttaaggaactgaagcctcagaccgtgcagggctgcctacaa
ctccgcatcatggaaaactgctgcttgatggccaccaagcagaagtccagcgtggaacag
gcactgaacaccttcaccgagatagcagcctctgagaaggatcatatcccagctctcctg
ggaatggcaacggcttatatgatcttgaaacagactccaaaagccaggaaccagctgaag
cggattgcaaaaatgacttggaatcctattgaagccgaggatctggagaagagctggctg
ctgcttgctgatatttatattcagtcagcaaaatatgacatggcagaagaattactaaaa
cggtgtctgtgccataaccggtcttgctgcaaagcttatgaatatatggggtacattatg
gagaaagagcaagcatatacagatgcggccttcaactatgagatggcatggaaacatagc
aaccagacaaatcctgcagtgggatataaattggcatttaattacttaaaagcaaaacga
tatgtggatgcaattgacgtatgtcaccaggttcttgaagcacatccaacttaccccaaa
atcagaaaggatattcttgataaggcacgtgcatctttaagaccttga
DBGET
integrated database retrieval system
