KEGG   Mastomys coucha (southern multimammate mouse): 116090466
Entry
116090466         CDS       T07224                                 
Symbol
Ddb2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
  KO
K10140  DNA damage-binding protein 2
Organism
mcoc  Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03420  Nucleotide excision repair
mcoc04115  p53 signaling pathway
mcoc04120  Ubiquitin mediated proteolysis
mcoc05161  Hepatitis B
mcoc05169  Epstein-Barr virus infection
mcoc05200  Pathways in cancer
mcoc05202  Transcriptional misregulation in cancer
mcoc05210  Colorectal cancer
mcoc05212  Pancreatic cancer
mcoc05213  Endometrial cancer
mcoc05214  Glioma
mcoc05216  Thyroid cancer
mcoc05217  Basal cell carcinoma
mcoc05218  Melanoma
mcoc05220  Chronic myeloid leukemia
mcoc05222  Small cell lung cancer
mcoc05223  Non-small cell lung cancer
mcoc05224  Breast cancer
mcoc05225  Hepatocellular carcinoma
mcoc05226  Gastric cancer
Brite
KEGG Orthology (KO) [BR:mcoc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    116090466 (Ddb2)
  09124 Replication and repair
   03420 Nucleotide excision repair
    116090466 (Ddb2)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    116090466 (Ddb2)
   05202 Transcriptional misregulation in cancer
    116090466 (Ddb2)
  09162 Cancer: specific types
   05210 Colorectal cancer
    116090466 (Ddb2)
   05212 Pancreatic cancer
    116090466 (Ddb2)
   05225 Hepatocellular carcinoma
    116090466 (Ddb2)
   05226 Gastric cancer
    116090466 (Ddb2)
   05214 Glioma
    116090466 (Ddb2)
   05216 Thyroid cancer
    116090466 (Ddb2)
   05220 Chronic myeloid leukemia
    116090466 (Ddb2)
   05217 Basal cell carcinoma
    116090466 (Ddb2)
   05218 Melanoma
    116090466 (Ddb2)
   05213 Endometrial cancer
    116090466 (Ddb2)
   05224 Breast cancer
    116090466 (Ddb2)
   05222 Small cell lung cancer
    116090466 (Ddb2)
   05223 Non-small cell lung cancer
    116090466 (Ddb2)
  09172 Infectious disease: viral
   05161 Hepatitis B
    116090466 (Ddb2)
   05169 Epstein-Barr virus infection
    116090466 (Ddb2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mcoc04121]
    116090466 (Ddb2)
   03400 DNA repair and recombination proteins [BR:mcoc03400]
    116090466 (Ddb2)
Ubiquitin system [BR:mcoc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     116090466 (Ddb2)
DNA repair and recombination proteins [BR:mcoc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      116090466 (Ddb2)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_IFT140_1st WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_EIPR1 Beta-prop_HPS5 EIF3I WD40_RFWD3 Beta-prop_TEP1_C NBCH_WD40 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_Vps41 PEP5_VPS11_N WD_LRWD1 Beta-prop_SPT8
Other DBs
NCBI-GeneID: 116090466
NCBI-ProteinID: XP_031226852
LinkDB
Position
Unknown
AA seq 432 aa
MTPKKCPETQKPPDVAVLLQSKSRRSPQEQEPEAKKLCVQGPVSSRKCESCCLLAELSNL
QIPPRSSSIIRDLYLHKLGKATWPSLQQGLQKSFLNSLASYRVFQKAAPFDRRTTSLAWH
PTHPSTLAVGSKGGDIMIWNFAIKDKPIFLKGIGAGGSITGLKFNHLNPDQFFASSMEGT
TRLQDFKGNVLRVYASSNSCKVWFCSLDVSAKSRVVVTGDNMGHVFLISTDGKQLWNLRM
HKKKVAHVALNPCCDWLLATASIDQTVKIWDLRQIKGKDSFLYSLPHRHPVNAACFSPDG
ARLLTTDQNNEIRVYSASQWDSPLSLISHPHRHFQHLTPIKATWHSRYNLIVVGRYPDPN
LKGCVPYELRTIDVFDGSSGKMTCQLYDPGYSGITSLNEFNPMGDTLASTMGFHILIWRP
EEDGSQKDHKRL
NT seq 1299 nt   +upstreamnt  +downstreamnt
atgactcccaagaaatgcccagaaacccagaagccccccgacgttgcggtgctcctccag
agcaaaagtcgcagaagtcctcaggagcaggagcccgaagccaagaagctgtgtgtgcag
ggtcccgtttctagcaggaaatgtgagtcgtgctgccttctggcagagttgtccaacctg
cagatccctccacggagtagcagcattatcagggatctttacctgcataagctgggcaaa
gccacttggccatcactgcagcagggtctccagaagtcctttttgaactctctagcttct
taccgggtattccaaaaagctgccccctttgacaggaggactacatccttggcatggcac
ccgactcatcccagtaccctggctgtgggctccaaagggggagatattatgatctggaat
tttgccataaaggacaaacctatcttccttaaagggattggagctggaggaagcatcact
gggttgaagtttaaccatctcaatcccgaccagttttttgcctcctcaatggagggaaca
accaggctgcaggactttaaaggcaacgttctcagagtttacgccagctcaaactcttgc
aaggtctggttttgcagccttgatgtttctgccaagagcagagtggtggttaccggagac
aatatgggacatgtgttcctgataagcacagacggcaagcagctttggaacctcagaatg
cacaaaaagaaagtagcccacgtggccctgaatccctgctgtgattggcttttggccaca
gcgtccattgatcaaacagtgaagatttgggacctgcgccaaattaaagggaaagacagc
ttcctctattcactacctcacaggcatcctgtcaatgcagcttgttttagcccagatgga
gctcggctcctgactactgaccagaacaatgagattcgggtttactctgcctcccagtgg
gatagccccctgagtctgatctcccaccctcaccgccattttcagcacctcacacccatt
aaggcaacctggcattcacggtacaacctcattgttgtgggccgatacccagatcctaat
cttaaaggttgtgttccctatgaactaaggacaatagatgtgtttgatggaagctccggg
aagatgacgtgtcagctctacgatccaggatattccggtattacttcgctcaatgagttc
aatcctatgggagacacactggcctctactatgggttttcatattcttatttggcgccca
gaggaagatgggtcacaaaaagatcataaaagactatga

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