Mastomys coucha (southern multimammate mouse): 116090475
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Entry
116090475 CDS
T07224
Symbol
Lrp4
Name
(RefSeq) low-density lipoprotein receptor-related protein 4 isoform X1
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116090475 (Lrp4)
Membrane trafficking [BR:
mcoc04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
116090475 (Lrp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
Vgb_lyase
SGL
cEGF
DUF5050
EGF_LRP2
EGF_CA
Motif
Other DBs
NCBI-GeneID:
116090475
NCBI-ProteinID:
XP_031226871
LinkDB
All DBs
Position
Unknown
AA seq
1925 aa
AA seq
DB search
MRRWWDALLLGALLCAHGIASNLECACGRSHFTCAVSALGECTCIPAQWQCDGDNDCGDH
SDEDGCTLPTCSPLDFHCDNGKCIRRSWVCDGDNDCEDDSDEQDCPPRECEEDEFPCQNG
YCIRSLWHCDGDNDCGDNSDEQCDMRKCSDKEFRCSDGSCIAEHWYCDGDTDCKDGSDEE
SCPSAVPSPPCNLEEFQCAYGRCILDIYHCDGDDDCGDWSDESDCSSHQPCRSGEFMCDS
GLCINAGWHCDGDADCDDQSDERNCTTSMCTAEQFRCRSGRCVRLSWRCDGEDDCADNSD
EENCENTGSPQCASDQFLCWNGRCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNV
NNGGCAQKCQMVRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQGCTNSEGAFQCWC
EAGYELRPDRRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRE
LVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANL
DGGHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWP
NGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHT
KSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPAGKNRCGDNNGGCTHLCLPSGQNY
TCACPTGFRKINSHACAQSLDKFLLFARRMDIRRISFDTEDLSDDVIPLADVRSAVALDW
DSRDDHVYWTDVSTDTISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRI
EVANTDGSMRTVLIWENLDRPRDIVVEPMGGYMYWTDWGASPKIERAGMDASSRQVIISS
NLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVLIGSQLPHPFGLTLYGQRIYW
TDWQTKSIQSADRLTGLDRETLQENLENLMDIHVFHRQRPPVTTLCAVENGGCSHLCLRS
PNPSGFSCTCPTGINLLLDGKTCSPGMNSFLIFARRIDVRMVSLDIPYFADVVVPINMTM
KNTIAIGVDPLEGKVYWSDSTLHRISRASLDGSQHEDIITTGLQTTDGLAVDAIGRKVYW
TDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVLYHEMGYMYWTDWGENAKLERSGMDGS
DRTVLINNNLGWPNGLTVDKTSSQLLWADAHTERIEVADLNGANRHTLVSPVQHPYGLTL
LGSYIYWTDWQTRSIHRADKSTGSNVILVRSNLPGLMDIQAVDRAQPLGFNKCGSRNGGC
SHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDTDDHTDVHVP
VPGLNNVISLDYDSVDGKVYYTDVFLDVIRRADLNGSNMETVIGHGLKTTDGLAVDWVAR
NLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPRKGYLFWTDWGHIAKIERAN
LDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLVSHVSHPF
ALTQQDRWIYWTDWQTKSIQRVDKYSGRSKETVLANVEGLMDIIVVSPQRQTGTNACGVN
NGGCTHLCFARASDFVCACPDEPDSHPCSLVPGLVPPAPRATSKNEKSPVPPNTLPTTLH
PSTTKPHTSLEGTKGRCSERDAQLGLCAHSNEAVPAAPGEGLHISYAVGGLLSILLILLV
IAALMLYRHRKSKFTDPGMGNLTYSNPSYRTSTQEVKLEAAPKPAMYNQLCYKKELTTRS
FIECQPTMGLHFLPQGGPDHSYTKEKIKIVEGIRLLAGDEAEWGDLKQLRSSRGGLLRDH
VCMKTDTVSIQASSGSLDDTETEQLLQEEQSECSSVHTAATPERRGSLPDTGWKHERKLS
SESQV
NT seq
5778 nt
NT seq
+upstream
nt +downstream
nt
atgaggcggtggtgggacgcgctgctgcttggcgccctgctctgcgcacacggcatagcc
agcaatctggagtgtgcatgtggtcggagccacttcacatgtgcagtgagtgcgctcggc
gaatgtacctgcatccccgcccagtggcagtgtgatggagacaatgactgcggagaccac
agcgatgaggatggctgtacactgcctacctgctcccctctggacttccactgtgacaat
ggcaagtgtatccgacgctcctgggtgtgtgacggggacaatgactgtgaagatgactct
gatgagcaggactgtcccccccgagagtgtgaggaggacgagttcccctgccagaacggc
tactgcatccggagtctgtggcactgtgatggggacaacgactgtggtgacaacagtgat
gagcaatgcgacatgcgcaagtgctcagacaaggaattccgctgcagcgacgggagctgc
attgctgagcattggtactgcgatggtgacacagactgcaaagatggctctgatgaggag
agctgcccctccgcagtaccctcccctccttgcaacctggaagagttccagtgtgcctat
ggtcggtgcatccttgacatctaccactgtgacggagatgacgactgtggagactggtca
gacgagtccgactgctcctcccaccagccctgccgctctggggaattcatgtgtgacagt
ggcctgtgcatcaatgcgggctggcactgtgacggtgatgcggactgtgatgaccagtct
gatgaacgcaattgcaccacctccatgtgcacagccgaacagtttcgatgtcggtcaggc
cgctgcgtccgtctgtcctggcgctgcgatggggaagatgactgtgcagacaacagtgat
gaagaaaactgtgagaacacaggaagcccccaatgcgcctctgaccagttcctgtgttgg
aacgggcgttgtattgggcagaggaagctgtgcaacggggtcaatgactgcggtgacaac
agtgacgaaagtccacagcagaactgtcggccccggacgggtgaggagaactgcaatgtt
aacaacggtggctgtgcccagaagtgtcagatggtacgaggggcagtgcagtgtacctgc
cacacaggctaccggctcacagaggatggcaggacgtgccaggatgtgaatgagtgtgct
gaggaggggtactgcagccagggctgcaccaacagtgaaggggctttccagtgctggtgt
gaagcgggttatgaactgcggccggaccggcgcagctgcaaggctctggggccagaacct
gtgctactgtttgccaatcgtatcgacatccggcaggtgctcccgcaccgctccgaatac
acgctgctactgaacaacctggagaacgccattgcccttgactttcatcaccggcgggag
ctggtcttctggtctgatgtcaccctggaccgcatcctccgtgccaaccttaatggcagc
aatgtggaggaggtggtgtctactgggctagagagcccagggggcctggctgtggattgg
gttcatgacaagctctactggactgactctgggacatcaaggattgaggtggctaatctg
gatgggggccaccggaaagtgctgctgtggcagagcctagagaagcccagggccattgcc
ctgcaccccatggagggaaccatttattggacagactggggcaacaccccccgcattgag
gcctccagcatggatggctctggacgtcgcatcatcgctgacactcatcttttctggccc
aatggcctcaccattgactatgctggacgccgcatgtactgggtggatgctaagcaccac
gtcatcgagagggccaatctagatgggagtcaccgcaaggctgtcattagccagggcctc
ccacatccctttgccatcacagtgtttgaagacagcttgtattggacagactggcacacc
aagagcatcaatagtgccaacaagtttactgggaagaaccaggaaatcattcgcaacaag
ctccactttcctatggatattcataccttgcatccccagcgccagcctgcagggaaaaac
cgctgtggggacaacaatggcggttgcactcacctgtgtctacccagtggccagaactac
acctgtgcctgccctaccggcttccgcaagatcaacagccacgcctgtgcccagagtctt
gacaagttcctgctttttgcccgaaggatggacatccgtcggatcagcttcgacacagag
gacctgtccgacgatgtcatcccactggctgacgtgcgcagtgctgtggcccttgactgg
gactcccgggatgaccacgtgtactggacagatgtcagcactgataccatcagcagggcc
aagtgggatggaacaggacaggaggtggtagtggataccagtttggagagccctgctggc
ctggcaattgattgggtcaccaacaagctctattggacagatgcaggtacagaccggatt
gaagtggccaacacggatggcagcatgaggacggtgctcatctgggagaaccttgaccgt
cctcgggacatcgtggtagagcccatgggcgggtacatgtattggaccgactggggtgca
agtcccaagattgaacgagctggcatggatgcctccagccgacaagtcatcatctcttcg
aatctgacatggcctaatggattagctattgactatgggtcccagcggctgtactgggct
gatgcgggcatgaagactattgaatttgctgggctggatggcagcaagaggaaggtcctc
attggaagtcaactcccccatcctttcgggctcactctatacggacaacgcatctactgg
actgactggcagaccaaaagtatacaaagtgctgaccggctgactgggctagaccgggag
acgctgcaggagaacctggagaatcttatggacatccatgtcttccaccgccagaggcct
ccagtgacaacactgtgtgctgtggagaatggcggctgcagccatttgtgtctcaggtcc
ccaaatccaagcggcttcagctgtacgtgccccacaggtatcaacctgctgcttgatggc
aagacatgctcaccaggcatgaacagtttcctcatcttcgccaggaggattgatgttcgc
atggtctccttggacatcccttattttgctgatgtggtggtacccatcaacatgaccatg
aagaacaccattgccattggagtggacccgctggaaggaaaagtgtactggtctgatagc
acactgcacaggatcagccgtgccagcctggatggctcacagcatgaggacatcatcact
acaggtctgcagaccacagatgggcttgcagtggatgccatcggccggaaagtgtactgg
acagacacgggaacgaatcggattgaagttggtaacctggatgggtctatgcggaaagtg
ttggtgtggcagaaccttgacagtcctcgggccattgtactataccatgaaatggggtac
atgtactggacagactggggggagaatgccaaattagagcgttccggaatggatggctcg
gaccggactgtgctcatcaacaacaacttagggtggcccaatggactgactgtggacaaa
accagctcccaactgctgtgggctgatgcccatactgagagaattgaggtagcagacctg
aatggtgccaatcggcatacactggtgtcaccagtccagcacccgtatggcctcactctg
cttggttcctatatctactggaccgactggcagacccgtagcatccaccgggctgacaag
agtactggcagcaatgtcatcctcgtaaggtccaacctgccaggcctcatggacatccaa
gctgttgaccgggcacagccactgggttttaataagtgtggctcgagaaatggcggctgc
tcccacctctgtttacctcggccttctggtttctcctgtgcctgccccactggcattcag
ctgaagggagatgggaagacctgtgacccctctccagagacctacctgctcttctctagc
cgaggctccattcgccgtatctcactggacaccgatgaccacaccgacgtccatgttcct
gttcctgggctcaacaacgtcatctccctagactatgacagtgtagatggaaaggtctat
tacacagacgtgttcctggatgttatcaggcgagcagatctgaatggcagcaacatggag
actgttattgggcatgggctgaagaccactgatgggctggccgtggactgggttgccaga
aacctgtactggacagatacaggccgaaataccatcgaagcatctcggctagacggatcc
tgtcgcaaagtgttaatcaacaacagtctggacgagccccgggccattgctgttttcccc
agaaaggggtacctcttctggacagactggggccacattgccaagattgaacgggcaaac
ctggacggttctgagaggaaggtcctcatcaacacagacctaggctggcccaatggcctt
accttggactatgatacccgcaggatctactgggtagatgcacatctggatcgaatcgag
agtgctgaccttaatgggaagctgaggcaggtcttggtcagccatgtgtcccaccccttt
gccctcacacagcaggacaggtggatctactggacagactggcagaccaagtccatccag
cgtgtcgacaagtactcaggccgcagcaaggagacagtgctggccaatgtggaaggactc
atggatatcatcgtggtgtcccctcagcggcagacagggaccaatgcctgtggtgtgaac
aatggtggctgtacccacctctgctttgccagagcctctgactttgtgtgtgcctgtcct
gatgagccagacagtcacccctgctctcttgtacctggcctcgtgcctcctgctcccaga
gctaccagcaagaatgaaaagagcccagtgccacccaacacactgcctaccaccttacat
ccttctaccaccaaaccccacacatctctggaggggacaaaaggaagatgctctgagagg
gatgcccagctgggcctctgtgcacattccaatgaagctgtacctgctgctccaggtgag
ggactgcacatcagctatgccgtcggaggacttctcagcatcctgctgattttgttggtg
attgcggctttgatgctatacagacacagaaaatccaaattcacggatcctggaatggga
aacctgacctacagcaacccctcctaccgaacttccactcaggaggtgaaacttgaagca
gctcccaagccagccatgtataatcagctgtgctataagaaagagctcaccacgaggtcc
tttatagaatgccagccaaccatgggtctccattttctaccccagggtggacctgaccac
agctacaccaaggagaagatcaagattgtagagggaattcgcctcctggctggggatgaa
gctgaatggggtgacctcaagcaactgcgcagctccaggggggggcttctacgggatcac
gtatgcatgaagacagacacagtgtccatccaggccagctctggctccctagatgacacg
gagacagagcagctgctgcaggaagagcagtctgagtgtagcagtgttcacactgcagcc
actccagagagacggggctccctgccagacacaggctggaaacacgaacgcaagctctcc
tcagaaagccaggtctaa
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integrated database retrieval system
