Mastomys coucha (southern multimammate mouse): 116090484
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Entry
116090484 CDS
T07224
Symbol
Ambra1
Name
(RefSeq) activating molecule in BECN1-regulated autophagy protein 1 isoform X1
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04137
Mitophagy - animal
mcoc04140
Autophagy - animal
mcoc05010
Alzheimer disease
mcoc05014
Amyotrophic lateral sclerosis
mcoc05016
Huntington disease
mcoc05017
Spinocerebellar ataxia
mcoc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116090484 (Ambra1)
04137 Mitophagy - animal
116090484 (Ambra1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
116090484 (Ambra1)
05014 Amyotrophic lateral sclerosis
116090484 (Ambra1)
05016 Huntington disease
116090484 (Ambra1)
05017 Spinocerebellar ataxia
116090484 (Ambra1)
05022 Pathways of neurodegeneration - multiple diseases
116090484 (Ambra1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116090484 (Ambra1)
03029 Mitochondrial biogenesis [BR:
mcoc03029
]
116090484 (Ambra1)
Membrane trafficking [BR:
mcoc04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
116090484 (Ambra1)
Mitochondrial biogenesis [BR:
mcoc03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
116090484 (Ambra1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
EIF3I
Beta-prop_IFT122_1st
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
eIF2A
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Acyl_CoA_thio
Motif
Other DBs
NCBI-GeneID:
116090484
NCBI-ProteinID:
XP_031226897
LinkDB
All DBs
Position
Unknown
AA seq
1300 aa
AA seq
DB search
MKVVPEKNAVRILWGRERGTRAMGAQRLLQELVEDKTRWMKWEGKRVELPDSPRSTFLLA
FSPDRTLLASTHVNHNIYITEVKTGKCVHSLIGHRRTPWCVTFHPTISGLIASGCLDGEV
RIWDLHGGSESWFTDSNNAIASLAFHPTSQLLLIATANEIHFWDWSRREPFAVVKTASEM
ERVRLVRFDPLGHYLLTAIVNPSNQQGDDEPEIPIDGTELSHYRQRALLQSQPVRRTPLL
HNFLHMLSSRSSGIQVGEQSTVQDSATPSPPPPPPQPSTERPRTSAYIRLRQRVSYPTTV
ECCQHPGILCLCSRCAGTRIPSLLPHQDSVPPASARATTPSFSFVQTEPFHPPEQASSTQ
QDQGLLNRPSAFSTVQSSTAGNTLRNLSLGPTRRSLGGPLSSHPSRYHRELAPGLTGSEW
TRTVLTLNSRSEVESVPPPRTSASSVSLLSVLRQQEGGSQASVYTSATEGRGFPSSGLAT
ESDGGNGSSQNNSGNIRHELQCDLRRFFLEYDRLQELDQGLSGETPQTQQAQEMLNNNIE
SERPGPSHQPTPHSSENNSNLSRGHLNRCRACHNLLTFNNDTLRWERTTPNYSSGEASSS
WHVSTTFEGIPPSGNQLPPLERTEGQMPSSSRLELSSSASSQEERTVGVAFNQETGHWER
IYTQSSRSGTVSQEALHQDMPEESSEEDSLRRRLLESSLISLSRYDGAGSREHPIYPDPA
RLSPAAYYAQRMIQYLSRRDSIRQRSMRYQQNRLRSSTSSSSSDNQGPSVEGTDLEFEDF
EDNGDRSRHRAPRNARMSAPSLGRFVPRRFLLPEYLPYAGIFHERGQPGLATHSSVNRVL
AGAVIGDGQSAVASNIANTTYRLQWWDFTKFDLPEISNASVNVLVQNCKIYNDASCDISA
DGQLLAAFIPSSQRGFPDEGILAVYSLAPHNLGEMLYTKRFGPNAISVSLSPMGRYVMVG
LASRRILLHPSTEHMVAQVFRLQQAHGGETSMRRVFNVLYPMPADQRRHVSINSARWLPE
PGLGLAYGTNKGDLVICRPEALNSGIEYYWDQLNETVFTVHSSSRSSERPGTSRATWRTD
RDMGLMNAIGLQPRNPTTSVTSQGTQTLALQLQNAETQTEREEEEPGAASTGPGEGEGSE
YGGSGEDALSRIQRLMAEGGMTAVVQREQSTTMASMGGFGNNIIVSHRIHRSSQTGTESG
AARTSSPQPSTSRGLLSEPGQLTERALSPQTASWDQPSTSGRELPQPALSSSSPVPIPAP
LASNEGPTMHCNVTNNSHLPEGDGSNRGEAAGPSGEPRNR
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgtcccagagaagaatgctgtacgaatcctctggggccgagaacggggcact
cgtgccatgggtgcccagcgacttctgcaggagctggtggaggataagactcgatggatg
aaatgggagggcaagagagtagaactgcctgatagtccacgctcgaccttcttactggcc
ttcagcccagacaggactctcttggcgtccacacatgtgaaccataacatctatattaca
gaggttaagactggcaagtgtgttcactctctgattggacaccgccgtactccatggtgt
gtcacttttcatcctaccatctcaggccttattgcttctggctgcctagatggagaagtt
aggatttgggatttacatggtggcagtgaaagctggttcacagatagcaacaatgctata
gcctccttggctttccaccctacgtctcaactcctactgattgccactgcaaatgagatt
catttctgggattggagtcgtcgggagccctttgctgtggtgaaaacagccagtgagatg
gaacgtgtccgtctggtgagatttgatccacttggacactacttacttacagctattgtt
aacccttctaatcagcagggtgatgacgaaccagaaatccctatagatggaacagagtta
tctcattaccgtcagcgtgccctcctgcaatcacagccagttcgccggacacctctcctc
cacaatttcctgcacatgctgtcctcccgctcctctggcatccaggtgggagagcaaagc
acagtacaagattctgctaccccctcacccccaccgcctccccctcagccctctacggag
cgtcccaggacttccgcttacatcagactccgacagcgggtcagttaccccaccacagtt
gagtgctgccagcaccctgggatcctgtgcctttgcagccgctgtgctggcactcgaatt
ccttccctcttgccacaccaggacagtgtcccccctgcttctgccagagctactacccct
tccttttcttttgtacagaccgagcccttccaccccccggagcaggcttcatcaacgcag
caggaccagggcctcctgaaccggccatctgccttcagtacagtccagagcagcactgcg
ggcaacacgctccgcaacctcagtctgggtcctacccgtcgttctttggggggccctttg
tctagccatccttctaggtatcacagagaactagcccctgggctgacaggttctgagtgg
acccggacagtactcactctgaactcacgttctgaggtagaatctgtgcccccaccgagg
accagtgcatcctcagtgagtttgctttctgtactgagacagcaggaaggtggctctcag
gcatctgtgtatacttcagccacagaagggaggggttttccatcatcagggttggcaact
gagtcagatggagggaatggttccagccaaaacaactcaggcaacattcgccatgaactt
caatgtgacctgagacgcttctttttggagtatgacaggctgcaagagctggatcagggc
ctgagtggggaaactccccagacccaacaggcccaggaaatgctcaacaacaatattgaa
tcggagagaccaggtccttcccatcagcctactccacacagcagtgagaacaactccaac
ctgtctcggggccaccttaatcgatgccgtgcttgccataatcttctaaccttcaacaat
gatacccttcgttgggaaagaaccacacctaactactcatctggtgaggctagctcttcc
tggcatgtctccactacctttgagggcataccaccgagtggcaaccagctaccacctctt
gagcggactgagggccaaatgcctagctccagcaggctggagttgagcagctctgctagt
tcacaagaggagaggactgtgggggtggcctttaaccaggagacaggccactgggaacga
atttatacccagtccagcagatctggaactgtatcacaggaggccttacatcaggatatg
cctgaagaaagctctgaggaagactccctcaggaggaggctgctggagtcttccctcatt
tcattatcccgttatgatggagcaggatccagagagcacccaatttacccagacccagcg
agattatctcctgctgcatactacgcccagaggatgatccagtatctctcaaggagagac
agtattcgccagcgctccatgcgctaccaacagaatcggcttcgttcttccacctcctct
tcttcctcagacaaccagggtccatcagtagagggaaccgacttggaatttgaggacttt
gaggacaatggtgacagatctaggcaccgagctccccgaaatgcccgaatgtctgcacct
tcacttggacgctttgtcccaaggcgttttttgctgcctgagtacttgccttatgctggg
atttttcatgaacgtggacagcctggcttggctactcattcttctgttaacagggtcctg
gcaggagcagtaattggagatggacagtctgctgtggccagtaacattgccaacactacc
tacaggcttcagtggtgggacttcactaagtttgaccttccagaaatcagtaatgcctca
gtgaatgtcctggtacagaactgcaagatctacaatgatgccagctgtgacatttctgca
gatggccagctcctggcagcctttatcccgagcagccagaggggctttcctgatgaaggc
atcctggcagtgtattccctggccccccataacttgggggaaatgctctacaccaagcga
tttggtcccaatgccatttctgtaagcctgtccccaatgggccgatacgttatggtgggc
ttggcctcacgaaggatcctactgcacccctccacagagcacatggtagcccaggtcttc
aggctgcaacaggcccatggtggtgagacttccatgaggagagttttcaatgtcctttac
cccatgcctgctgaccaacggagacatgtcagcatcaactctgcccgttggctacctgag
ccagggcttggtttggcctatggcaccaacaaaggagacctggtgatctgccgaccagag
gccttaaactctggcatcgagtactactgggaccagctaaatgaaacggtcttcactgtc
cactcaagtagcaggagcagcgagcggcctggaaccagcagagccacatggcggacagac
agagacatgggcttgatgaatgcaattggactgcaacctcggaacccaaccacctctgtg
acatctcagggcacccagactctggccctccagttgcagaatgctgaaacacagactgag
agggaggaagaggaaccaggggcagcatccacaggtcctggtgaaggcgagggctcagaa
tatggtggcagtggggaagatgccctcagcaggatccagaggctaatggccgagggtggc
atgacagctgtggtacagcgggagcagagcaccaccatggcctccatgggtggctttggc
aacaacatcatcgttagccaccgcattcaccgcagctcccagacaggcacggagtcaggg
gctgctcgtacctcctcaccccagccctccacctctcgaggactgctctcagaacctggg
caactgacagagcgagccctaagcccccagacagcctcctgggaccagcctagtacctct
gggagggaactaccccagccagccctgtcctcttcctcccctgtccccattccagccccc
cttgccagcaatgagggaccaaccatgcactgcaatgtgaccaataacagtcaccttcct
gagggtgatggtagcaacaggggggaagctgcaggccctagtggggagcctcggaaccga
tag
DBGET
integrated database retrieval system
