Mastomys coucha (southern multimammate mouse): 116090512
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Entry
116090512 CDS
T07224
Symbol
Prdm11
Name
(RefSeq) PR domain-containing protein 11 isoform X1
KO
K24644
PR domain zinc finger protein 11 [EC:2.1.1.-]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcoc03000
]
116090512 (Prdm11)
Transcription factors [BR:
mcoc03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
116090512 (Prdm11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
SET
Dimer_Tnp_hAT
Zn_ribbon_PRDM4
DUF7822
FOG1-like_PR
Phage-scaffold
DUF4954
Motif
Other DBs
NCBI-GeneID:
116090512
NCBI-ProteinID:
XP_031226952
LinkDB
All DBs
Position
Unknown
AA seq
1237 aa
AA seq
DB search
MSFPVLIRWWSKQGRRAAASRRRAAAGAETLPGRGPRARPPRPAASRRSGPGPARSPAWE
PAKDRMTENMKECLAHTKAAVGDMVTVVKTEVCSPLRDQEYGQPCSRRLEPSSMEVEPKK
LKGKRDLIVAKNFQQVDFWFCESCQEYFVDECPNHGPPMFVSDTPVPVGIPDRAALTIPQ
GMEVVKEAGGESDVRCINEVVPKGHIFGPYEGQISTQDKSAGFFSWLIVDKNNRYKSIDG
SDETKANWMRYVVISREEREQNLLAFQHSERIYFRACRDIRPGERLRVWYSEDYMKRLHS
MSQETIHRNLARGEKRLQREKAEQALDNPEDLRGPTQFPMLKQGRSPYKRSFDEGDIHPQ
AKKKKIDLIFKDVLEASLESANVEARQLALSTSLVIRKVPKYQDDDYGRAALTQGICRTP
GEGDWKAPQRVAKELGPLEDEEEEPTSFKADSPAEASLASDPHELPTTSFCPNCIRLKKK
VRELQAELDMLKSGKLPEPPLLPPQVLELPEFSDPVASESMVSGPAIMEDDDQEVDSADE
SVSNDVMTATDEPSKMSSATGRRIRRFKQEWLKKFWFLRYSPTLNEMWCHVCRQYTVQSS
RTSAFIIGSKQFKIHTIKLHSQSNLHKKCLQLYKLRMHPEKTEEMCRNMTLLFNTAYHLA
LEGRPYLDFRPLAELLRKCELKVVDQYMNEGDCQILIHHIARALREDLVERIRQSPCLSI
ILDGQSDDLMADTVAVYVQYTSSDGPPATEFLSLQELGFSSTESYLQALDRAFAALGIRL
QDEKPTVGLGVDGANITASLRASMFMTIRKTLPWLLCLPFMVHRPHLEILDAISGKELPC
LEELENNLKQLLSFYRYSPRLMCELRSTASTLCEETEFLGDIRAVRWIIGEQNVLNALIK
DYLEVVAHLKDVSSQTQRADASAIALALLQFLMDYQSIKLIYFLLDVIAVLSRLAYIFQG
EYLLVSQVDDKIEEAIQEISRLADSPGEYLQEFEENFRESFNGIAVKNLRVAEAKFQSIR
EKICQKTQVILAQRFDSRSRVFVKACQVFDLAAWPRNSEELLSFGKEDMVQIFDHLEAIP
AFSRDVCREGMDPRGSLLMEWRDLKADYYTKNGFKDLISHICKYKQRFPLLNKIIQVLKV
LPTSTACCEKGRSALQRVRKNHRSRLTLEQLSDLLTIAVNGPPIANFDAKRALDSWFEEK
SGNSYTLSAEVLSRMSALEQKPMLQVVDHGSEFYPDM
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttcctgtactaataagatggtggtcaaagcaggggaggagagcagcagcgagt
cgccgccgcgctgccgctggcgctgaaactttgcccggccggggaccccgcgcgcggccg
ccccgtcccgccgcgtcccgccgctccggccccggcccggcccgcagccccgcgtgggag
ccagcgaaggacagaatgactgagaacatgaaggagtgcttggcccacaccaaggcggct
gtaggggacatggtgacagtagtgaagacagaggtctgctcaccactccgggaccaggag
tatggccagccctgctctcggagactggagccatcttccatggaagttgaacccaagaaa
ctgaagggaaagcgtgacctcattgtggccaaaaacttccagcaagtggacttctggttc
tgtgagtcatgtcaagagtacttcgtggatgagtgcccgaaccacggtccccccatgttt
gtgtctgacacgccagtgcccgtgggcatcccagatcgggcagccctcaccattccacag
ggcatggaggtggtaaaggaagctggcggagagagcgacgtgcggtgtataaacgaggtt
gtccccaagggccacatctttggcccttacgagggacagatctctacccaggacaagtca
gctggcttcttctcatggttgattgtggacaagaacaaccgatacaagtccatagatggg
tcggatgagaccaaggccaactggatgaggtacgtggtcatttcccgggaggagagggag
cagaacctcctggcattccagcacagtgagcgcatctacttccgggcatgccgagacatc
cggccaggagagcggctgagggtctggtacagcgaggactacatgaagcgcctgcatagc
atgtcccaggaaaccatccaccgcaacctggcccggggagagaagaggttgcagagagag
aaggctgagcaagccctggataacccagaagacctaaggggtcccactcagttccctatg
ttgaaacagggcagaagtccttacaagcgcagctttgatgagggagacatacaccctcag
gccaagaagaagaaaatcgacctcatcttcaaggatgtgctagaggcctcactggagtct
gctaacgtggaagcccgccagctggccctgagcacctccctggtcatccggaaagtcccc
aagtaccaggacgatgactatggtagagctgccctgacacaaggcatctgcaggacccca
ggggaaggggattggaaggcccctcaaagggtggccaaggagctgggcccactggaagat
gaagaggaggagcctacatcattcaaggccgacagtccagctgaggcctctctggcatct
gacccccatgagctgcccaccacctccttttgtcctaactgcattcgcctgaaaaagaaa
gtacgggaattgcaggcagagctagacatgcttaagtctggaaagctgcctgagcccccc
cttcttccaccgcaggtactggagctcccagagttctcagatcctgtagcctcagagagt
atggtctccggccccgccatcatggaggacgatgaccaggaagtggattctgcagatgaa
tctgtctccaacgacgtgatgacggcaaccgatgaaccctccaagatgtcctctgccacc
ggacgccgcatccggcgcttcaagcaggagtggctgaagaagttctggttcctacggtac
tcccctaccctgaacgagatgtggtgccatgtgtgccgccagtacacagtgcagtcctca
cgcacttccgccttcattatcggctccaagcagtttaagatccacaccatcaagctgcac
agccagagcaacctgcacaagaaatgcctgcagctgtacaaactgcgcatgcacccggag
aagacagaggagatgtgccgcaacatgactctgctcttcaacaccgcctaccacctggcg
ctggaggggaggccctacctcgacttccggcccctggcagagctgctgaggaagtgcgag
ctcaaagtggtggaccagtatatgaatgagggggactgccagatccttatccatcacatc
gcccgggcactgagagaggacctggtggagcgcatccgtcagtcgccctgcctcagcatc
atcctggatgggcagagtgatgaccttatggctgacacggtggccgtctatgtgcagtat
accagcagtgatggaccccccgccacagaattcctgtctctgcaagaactaggcttctcc
agcacggaaagctatctccaggcgcttgaccgagcctttgctgctctgggcatccggtta
caggacgagaagccaactgtgggcctgggagtggacggggccaacatcaccgccagcttg
cgcgccagcatgttcatgaccatccgcaagacgcttccatggctgctgtgcttgcccttt
atggtgcaccggccccacctggagatcctggatgccatcagtgggaaggagctgccctgc
ctagaggagctggagaacaacctgaaacagctcctcagcttctaccgctactcaccacgc
ctcatgtgtgagctgcgctccacggcctccaccctgtgcgaggagactgaattcctgggg
gacatccgtgcagtgaggtggatcattggtgagcagaatgtcctgaacgcccttatcaag
gactacctggaagtggtggcccacctgaaggatgtcagcagccagacacagcgggccgac
gcttcagccatagccctggccctgctgcagttcctcatggactaccagtccataaagctc
atctacttcctgctggacgtgattgccgtgctgtcacgcctggcctacatcttccagggc
gagtacctcctagtgtcgcaggtagacgacaagattgaggaggcgatccaggagatcagc
cggcttgcagactcccccggggagtacctgcaggaattcgaggagaatttccgagagagc
ttcaatgggatcgccgtgaaaaacctcagggtggccgaggccaagttccagtccatcagg
gagaagatttgccagaagacacaggtcattctggctcagaggttcgactcccgaagcagg
gtctttgtgaaggcctgccaagtgttcgacttagccgcctggcccaggaacagcgaggaa
ctcctgagcttcggcaaggaggatatggttcagatcttcgaccacctggaagccattcct
gctttctcccgggatgtgtgccgggaagggatggacccccgggggagcctgctgatggag
tggagagacctcaaggccgattactacaccaagaatggcttcaaagacctcatcagccac
atctgcaagtacaagcagaggtttccgctcttgaacaagatcattcaggtccttaaagtc
ctccccacctccaccgcctgctgtgagaaaggccgaagtgctctccagcgggtccgcaaa
aaccaccgctcccgcctgaccctggaacagctcagtgacctgttgacaatagctgtgaac
ggaccacccatcgccaactttgatgccaagcgagccctggacagctggtttgaggagaag
tctggcaacagctacacactgtccgccgaagtcctcagtaggatgtccgccttggagcag
aagcccatgttgcaggttgtggaccatggctctgagttctacccagacatgtag
DBGET
integrated database retrieval system
