Mastomys coucha (southern multimammate mouse): 116090538
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Entry
116090538 CDS
T07224
Symbol
Lrrc4c
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04360
Axon guidance
mcoc04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116090538 (Lrrc4c)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
116090538 (Lrrc4c)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcoc04515
]
116090538 (Lrrc4c)
Cell adhesion molecules [BR:
mcoc04515
]
Immunoglobulin superfamily
NGL family
116090538 (Lrrc4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
LRR_1
V-set
LRR_14
LRR_9
Ig_2
LRRNT
Ig_6
LRR_LRWD1
Sp38
Herpes_gE_N
Syndecan
Motif
Other DBs
NCBI-GeneID:
116090538
NCBI-ProteinID:
XP_031226986
LinkDB
All DBs
Position
Unknown
AA seq
640 aa
AA seq
DB search
MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQ
GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHH
NPWNCNCDILWLSWWIRDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPP
ADLNVTEGMAAELKCRASTSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQD
TGMYTCMVSNSVGNTTASATLNVTAATTTPFSYFSTVTVETMEPSQDEARTTDNNVGPTP
VIDWETTNVTTSLTPQSTRSTEKTFTIPVTDINSGIPGIDEVMKTTKIIIGCFVAITLMA
AVMLVIFYKMRKQHHRQNHHAPTRTVEIINVDDEITGDTPMESHLPMPAIEHEHLNHYNS
YKSPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgaccttacatccacagcagataatgataggtcctaggtttaacagg
gccctatttgaccccctgcttgtggtgctgttggctcttcaacttcttgtggtggctggt
ctggttcgggctcaaacctgcccttcagtgtgctcttgtagcaaccagttcagcaaggtg
atttgtgttcggaaaaaccttcgtgaggttcctgatggcatctccaccaacacaaggttg
ctgaacctccatgagaaccaaatccagatcattaaagtgaacagcttcaagcatttgagg
cacttggaaatcctccagttgagtaggaaccatattcgaaccattgaaatcggggccttc
aatggtctggcgaacctcaacaccctggaactctttgacaatcgtcttaccaccatacct
aatggagcttttgtatatttgtctaaactgaaggaactctggttgaggaacaaccctatt
gaaagcatcccttcctatgcttttaacagaatcccttctttgcgccgcctagacttaggg
gaattgaaaaggctttcatacatctcagaaggtgcctttgaaggtctgtccaacttgagg
tatttgaatcttgccatgtgcaatctccgagaaatccctaacctcacgccgctcatcaaa
ctagatgagctagatctttctggaaaccatttgtctgcaatcaggcctggctcttttcag
gggttgatgcaccttcaaaaactgtggatgatacagtctcagattcaagtgattgaacgg
aatgcctttgataaccttcagtcactagtggagataaacttggcacacaacaatctaaca
ttattgcctcacgacctcttcacacccttgcatcatctagagaggatacaccttcatcac
aacccatggaactgtaactgtgacatcctgtggctcagctggtggataagagacatggct
ccctccaacacagcttgttgtgccaggtgtaacactccccccaacttgaaagggaggtac
atcggagagctggaccagaattactttacatgttatgctcccgtaattgtggagccccct
gcagacctcaatgtcactgaaggcatggcagctgagctgaaatgtcgggcatctacatcc
ctgacttccgtatcttggattactccaaatggaacagtcatgacccatggggcatacaaa
gtgcggatagctgtgctcagcgatggtactttaaatttcacaaatgtaactgtgcaagac
acaggcatgtacacgtgtatggtgagtaattctgttggcaacaccactgcttctgccacc
ttgaatgttactgcggcaaccactactccgttctcgtacttttcaactgtaacagtagag
actatggaaccttctcaggatgaggcacggaccacagataacaatgtgggccccactcca
gtgatcgattgggagaccaccaatgtaaccacatctcttacgccacagagcacaaggtcg
acagaaaaaacattcaccatcccagtaactgacatcaacagcggaatcccaggaattgat
gaggtcatgaaaacaaccaaaatcattattgggtgttttgtggccatcacactcatggct
gcggtgatgctagtcattttctacaagatgaggaaacagcaccatcggcaaaaccaccat
gctccaacaaggactgttgagattattaacgtggatgatgaaatcactggggacacgccc
atggaaagccacctgcccatgcctgcgattgagcatgagcacctaaaccactataactct
tacaaatctcccttcaaccacacaacaacagtaaacacaataaattcaatacacagttca
gtgcatgaaccgttattgatccgaatgaactctaaagacaatgtacaagagactcagata
taa
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