Mastomys coucha (southern multimammate mouse): 116090702
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Entry
116090702 CDS
T07224
Symbol
Mid1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116090702 (Mid1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcoc04121
]
116090702 (Mid1)
Enzymes [BR:
mcoc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116090702 (Mid1)
Ubiquitin system [BR:
mcoc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116090702 (Mid1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
PRY
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
FN3_DSCAM-DSCAML_C
TRIM_CC
Pur_ac_phosph_N
zf-RING_2
zf-C3HC4_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
116090702
NCBI-ProteinID:
XP_031227341
LinkDB
All DBs
Position
X:162905235..163268794
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AA seq
667 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNEPVESINAFQCPTCR
HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDTNTMSSAEKVLCQ
FCDQDPAQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHED
EKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTNLIKRNTELETL
LAKLIQTCQHVEVNASRQEAKLTEECDLLIEIIQQRRQIIGTKIKEGKVMRLRKLAQQIA
NCKQCIERSASLISQAEHSLKENDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFD
TFALDFSREKKLLECLDYLTAPNPPTIREELCTASYDTITVHWTSDDEFSVVSYELQYTI
FTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFMVKAINQAGSRSSEPGKLK
TNSQPFKLDPKSAHRKLKVSHDNLTVERDESSSKKSHTPERFTSQGSYGVAGNVFIDSGR
HYWEVVISGSTWYAIGLAYKSAPKHEWIGKNSASWALCRCNNNWVVRHNSKEIPIEPAPH
LRRVGILLDYDNGSIAFYDALNSIHLYTFDVALAQPVCPTFTVWNKCLTIITGLPIPDHL
DCTEQLP
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggagctgacctgtcctatttgtctggagctttttgaggaccct
ctgctgcttccctgtgcacatagcctctgcttcaactgtgcccaccgcatcctggtctct
cactgtgccaccaacgagcctgtggagtccattaacgccttccagtgccccacctgccgg
catgtcatcacgctcagccagcgaggtctagacgggctcaagagaaacgtcaccctacaa
aacatcattgacaggtttcagaaagcatctgtgagcgggcccaattctcccagtgagacc
cgcagggagcgggcctttgacaccaacaccatgtcctctgctgagaaggttctctgccag
ttctgtgaccaggatcctgcccaggatgctgtgaagacctgtgttacttgcgaagtgtcc
tactgcgatgagtgcctgaaagccactcatccgaacaagaagccctttacaggccatcgt
ctgattgagccaatcccggactcgcacatccgggggctgatgtgcctggagcacgaggat
gagaaggtgaatatgtactgtgtgaccgatgaccagttaatctgtgccttgtgtaaactg
gttgggcggcaccgcgatcatcaggtggcagctttgagtgagcgctatgacaaattgaag
caaaacttggagagtaatctcaccaatcttattaagagaaacacagaactggaaactctt
ttggctaaactcatccaaacttgccaacatgttgaagtcaatgcatcccgtcaagaagcc
aaattgacagaagaatgtgatcttctcattgaaattattcagcaaagacgacaaattatt
ggaacaaagattaaagaaggcaaggtgatgaggctccgaaaactagctcagcagattgca
aactgtaaacagtgcattgaaaggtctgcatcactcatctcccaagcagaacactcgctg
aaggagaatgaccatgcccgttttctacagacagcaaagaatatcactgagagagtctcc
atggcaactgcatcctcccaggtcctaattcctgaaatcaacctcaatgacacatttgac
acttttgccttagatttttcccgggagaagaaactgctagaatgtctggattacctaaca
gctcccaaccctcccacaattagagaagagctctgcacggcttcctatgacaccattact
gtccattggacttcagatgatgagttcagtgtggtctcctatgaactccagtacaccata
ttcactggacaagccaatgtcgttagtctgtgtaactcggcggatagctggatgattgtg
cccaacatcaagcagaaccactatactgtgcatggcctacaaagtggcaccaagtatatc
ttcatggtcaaggccatcaaccaggcaggcagccgcagcagtgagcctgggaagttgaaa
acaaacagtcagccatttaaactggatcccaaatctgctcatcgaaaactgaaggtgtcc
catgacaacctgactgttgaacgtgatgagtcatcatccaaaaagagtcacacacctgaa
cgcttcactagccaagggagctatggagtggctggaaatgtgttcattgatagtggccgt
cattactgggaagtggtcataagtggaagcacatggtacgccattggccttgcatacaaa
tctgctccaaaacatgaatggattgggaaaaattctgcttcctgggccctctgccgttgc
aacaataactgggtggtgagacataacagcaaggaaatccctattgagccagccccccac
ctccggcgcgtaggcatcctgctggactatgataatggctcaatcgctttttatgatgct
ttgaactccatccacctctacacctttgatgttgcacttgcgcagcctgtgtgccctacc
tttactgtgtggaacaagtgtttgacgattataactggtcttcccattccagaccatttg
gactgtacagaacagctaccttga
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